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Expanding the phenotype of IQSEC2 mutations: truncating
Expanding the phenotype of IQSEC2 mutations: truncating

... 53276030–53298472, hg19). Based on the probes from the SurePrint G3 Human CGH Microarray 180 K, duplication of IQSEC2 was intragenic and was between exon 2 and the end of exon 4 for patient 1, and between intron 2 and the end of exon 8 for patient 3. The duplication was confirmed by qPCR using exon ...
A deletion was detected on CGH microarray. The ISCN (2009)
A deletion was detected on CGH microarray. The ISCN (2009)

... Normal copy of 9 ...
Unit 3 - kehsscience.org
Unit 3 - kehsscience.org

Document
Document

... vulgare). For simplicity, vrs-1 is abbreviated as "v" in the following table. Hypothesis is 1:1 (expectation for 2 alleles at 1 locus in a doubled haploid population). The data are for a SNP in HvHox1 (3_0897) from the Hb population (n = 82). SNPs are assayed as nucleotides but converted to "A" and ...
Biology 102A
Biology 102A

... part of a chromosome is lost, added, or moved to another chromosome; usually not passed on because zygote dies Crossing over: occurs when chromosomes exchange genes. Two chromosomes overlap. Some genes cross over and switch places ...
Gene Tagging with Transposons
Gene Tagging with Transposons

... • Transposable elements are stretches of DNA that can move to new locations in a genome • These elements can contain genes or be non-coding • Large portions of higher eukaryotes’ genomes are composed of either inert or active transposons (often as repetitive DNA) • Transposons are thus important evo ...
Kartagener`s Syndrome: a relentless triad
Kartagener`s Syndrome: a relentless triad

... Bouvagnet, P. 2001. Axonemal Dynein Intermiediate-Chain Gene (DNAI1) Mutations Result in Situs Inversus and Primary Ciliary Dyskinesia (Kartagener Syndrome). Am. ...
Lecture 3-POSTED-BISC441-2012
Lecture 3-POSTED-BISC441-2012

... • Involves a series of sequential mutations • Mutations inhibit apoptosis and drive cell proliferation • Is testosterone-dependent (at least initially); breast cancer is often estrogen-dependent • Progression is mediated by genetic variation in the androgen receptor gene • Killer # 2 after lung canc ...
G 1 - University of Queensland
G 1 - University of Queensland

Study of regulatory promoter polymorphism (
Study of regulatory promoter polymorphism (

... The sensitivity of cells to apoptotic stimuli may depend on the balance of pro- and anti-apoptotic bcl2 proteins (22). Cells are more sensitive to apoptosis, when they are exposed to an excess of pro-apoptotic proteins; therefore, the cells will tend to be more resistant. The pro-apoptotic bcl-2 pro ...
Local Regulation of Homeostasis Favors Chromosomal
Local Regulation of Homeostasis Favors Chromosomal

... many years. This process is called homeostasis. Homeostasis breaks down when cells emerge with mutations in tumor suppressor genes or oncogenes. Such mutated cells can have increased net rates of proliferation, which is increased somatic fitness. We show that the best protection against such mutatio ...
Leukaemia Section t(3;12)(q26;q21) Atlas of Genetics and Cytogenetics in Oncology and Haematology
Leukaemia Section t(3;12)(q26;q21) Atlas of Genetics and Cytogenetics in Oncology and Haematology

... ZBTB16 /PLZF, ZFPM2/FOG2, JNK and the PI3K/AKT pathway. Role in cell cycle progression, likely to be cell-type dependant; antiapoptotic factor; involved in neuronal development organogenesis; role in hematopoietic differsntiation. ...
BECOME A SKIN CANCER DETECTIVE
BECOME A SKIN CANCER DETECTIVE

... the skin like warts. The difference is they originate on the squamous cells, which are the outermost layer of the epidermis. Melanoma: The most dangerous form of skin cancer caused when exposure to UV rays triggers genetic mutation in the skin resulting in malignant tumors. These tumors originate in ...
Test Info Sheet
Test Info Sheet

... marrow transplantation, recent blood transfusion, or suboptimal DNA quality. In individuals with active leukemia or  lymphoma or with known chronic myeloid or lymphoid neoplasms (such as low grade MDS, CML, ET, P. vera, PMF,  CLL), there is a possibility that testing of specimens containing leukocyt ...
Document
Document

... The Netherlands Cancer Institute in Amsterdam is to become the first institution in the world to use microarray techniques for the routine prognostic screening of cancer patients. Aiming for a June 2003 start date, the center will use a panoply of 70 genes to assess the tumor profile of breast cance ...
Nucleotide Sequence Preservation of Human
Nucleotide Sequence Preservation of Human

... alterations and either resistance to therapy or the development of métastases. We have applied recombinant DNA techniques to a specific question related to the phenomenon of neoplastic progression. Do mutations accumulate within human neoplastic cell popula tions? We have examined mtDNA3 isolated f ...
Neurogenetics
Neurogenetics

... Investigated: 58 families without CMT1A duplication Causal mutation found in 21 families (36,2 %) Among 46 familiar cases only 45,6% Families positive for Cx32 mutation were always large many members affected by CMT One family, possibly a de-novo mutation 6 families from 13 (46%) – carry the same mu ...
The making of the Fittest: Natural Selection and Adaptation
The making of the Fittest: Natural Selection and Adaptation

Slide 1 - Annals of Internal Medicine
Slide 1 - Annals of Internal Medicine

... and q arm (long arm). The cytochemical banding pattern has been used for several decades to localize genes and markers. Early studies of multiple endocrine neoplasia type 1 (MEN1) linked it to the PYGM marker (not shown) at 11q13 (chromosome 11, band q13) . B. The two copies of chromosome 11 from an ...
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... - complex IV is cytochrome ...
Soil_16s_RNA_Overview
Soil_16s_RNA_Overview

... ubique genome encodes almost all basic functions characteristic of -Proteobacteria, this genome contains little, if any, nonfunctional or redundant DNA and very short intergenic DNA regions, averaging only three bases in length (Giovannoni et al. 2005). It seems certain that many more surprises awa ...
Designer Babies
Designer Babies

... Some couples are not able to have children because their children will have a genetic disease and die before they are born or when they are very young. Techniques used to change the genetic makeup of the embryo allow these parents to have a child. If we want the best for our children why shouldn't w ...
Document
Document

... Molecular Network: Two different networks depending on whether the Xchromosome is included in the analysis. Resulting molecular-interaction network comprises of ...
Learning Regulatory Networks from Sparsely Sampled Time Series
Learning Regulatory Networks from Sparsely Sampled Time Series

... About CODM software ...
What is gene therapy?
What is gene therapy?

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Oncogenomics



Oncogenomics is a relatively new sub-field of genomics that applies high throughput technologies to characterize genes associated with cancer. Oncogenomics is synonymous with ""cancer genomics"". Cancer is a genetic disease caused by accumulation of mutations to DNA leading to unrestrained cell proliferation and neoplasm formation. The goal of oncogenomics is to identify new oncogenes or tumor suppressor genes that may provide new insights into cancer diagnosis, predicting clinical outcome of cancers, and new targets for cancer therapies. The success of targeted cancer therapies such as Gleevec, Herceptin, and Avastin raised the hope for oncogenomics to elucidate new targets for cancer treatment.Besides understanding the underlying genetic mechanisms that initiates or drives cancer progression, one of the main goals of oncogenomics is to allow for the development of personalized cancer treatment. Cancer develops due to an accumulation of mutations in DNA. These mutations accumulate randomly, and thus, different DNA mutations and mutation combinations exist between different individuals with the same type of cancer. Thus, identifying and targeting specific mutations which have occurred in an individual patient may lead to increased efficacy of cancer therapy.The completion of the Human Genome Project has greatly facilitated the field of oncogenomics and has increased the abilities of researchers to find cancer causing genes. In addition, the sequencing technologies now available for sequence generation and data analysis have been applied to the study of oncogenomics. With the amount of research conducted on cancer genomes and the accumulation of databases documenting the mutational changes, it has been predicted that the most important cancer-causing mutations, rearrangements, and altered expression levels will be cataloged and well characterized within the next decade.Cancer research may look either on the genomic level at DNA mutations, the epigenetic level at methylation or histone modification changes, the transcription level at altered levels of gene expression, or the protein level at altered levels of protein abundance and function in cancer cells. Oncogenomics focuses on the genomic, epigenomic, and transcript level alterations in cancer.
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