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Introduction and Preliminaries - Department of Computer and
Introduction and Preliminaries - Department of Computer and

... algorithms that may perform well in practice  Approximation algorithms: Design a polynomialtime algorithm that is guaranteed to find near-optimal solutions (with a good approximation ratio)  Heuristics: Fast algorithms that produce satisfactory solutions most of the time but without guarantee ...
Gene Section NEIL1 (nei endonuclease VIII-like 1 (E. coli))
Gene Section NEIL1 (nei endonuclease VIII-like 1 (E. coli))

... deoxyribo-5'-phosphate (dRP) and excised by a dRP lyase (dRPase) activity of DNA polymerase beta. Since NEIL1 also has dRPase activity, NEIL1 has a role as a backup dRPase in mammalian cells. (5) NEIL1 has a repair activity for oxidized bases in single-strand DNA and bubble DNA, suggesting a possibi ...
1. animal virus
1. animal virus

... History of Virology: discovery of viruses  1882 A. Mayer: transmission of tobacco mosaic disease by plant extract; pathogen can not be isolated  1892 D. Ivanofsky: agent of tobacco-mosaic disease is ‚non filtratable‘ and can not be propagated in culture medium  1898 M. Beijerinck: the pathogen c ...
Cloning
Cloning

... mammal to have been successfully cloned from an adult cell, though the first actual thing to be cloned was a tadpole in 1952[1]. ...
The Ethics of Reproductive Cloning
The Ethics of Reproductive Cloning

... technology in general. It also triggered ethical concerns of where this practice might lead, should cloning enter the realm of contemplated human reproductive therapies. The cloning of Dolly in 1997 aroused tremendous interest because for the first time an adult donor cell had been used to produce a ...
The Effects of varying pH on Plasmid Transfer
The Effects of varying pH on Plasmid Transfer

Genetics, environment and cognitive abilities
Genetics, environment and cognitive abilities

Daily Question - Mr. McCabe
Daily Question - Mr. McCabe

... 5. Think of genetics, write down at least 5 words that you think have anything to do with genetics… 6. Look back in your notebook, find either the 5 characteristics of life, or the 3 parts of the cell theory. (or if you can remember them off the top of your head)  ...
GRASP-DNA: A Web Application to Screen Prokaryotic Genomes for
GRASP-DNA: A Web Application to Screen Prokaryotic Genomes for

Cloning and characterisation of a cysteine proteinase gene
Cloning and characterisation of a cysteine proteinase gene

Bio 6 – DNA & Gene Expression Lab  Overview
Bio 6 – DNA & Gene Expression Lab Overview

... information, information in the form of a DNA sequence that can be expressed into proteins and passed on to the next generation. In other words, you are about to learn what genetic information actually means, not just for human beings, but for all life on earth. Once it was known that genes are made ...
A prophage-encoded actin-like protein required for efficient viral
A prophage-encoded actin-like protein required for efficient viral

... in vivo. Further, we show that AlpA binds a consensus sequence on the phage DNA molecules. The actin-like protein AlpC assembles into filaments that interact with the AlpA bound CGP3 DNA, which may function as a scaffold for the organization efficient viral replication. Corynebacterium glutamicum do ...
Cloning and characterization of the
Cloning and characterization of the

... phenotype of the S.cerevisiae los1∆ pus1∆ strain as well its sequence homology to scPus1p indicate that spPus1p may have pseudouridine synthase activity. To show this experimentally, we tested whether recombinant spPus1p exhibits a similar enzymatic activity to recombinant scPus1p. The spPUS1 ORF wa ...
NAME: ________________ DATE: ____________ BLOCK: _____
NAME: ________________ DATE: ____________ BLOCK: _____

... serotonin transporter and receptor genes predict adverse responses to anti-depression drugs, including PROZAC® and Paxil®. In this experiment, a sample of human cells is obtained by saline mouthwash. DNA is extracted by boiling with Chelex resin, which binds contaminating metal ions. Polymerase chai ...
Genetics 3 – Aneuploidies and Other Chromosome
Genetics 3 – Aneuploidies and Other Chromosome

... 2. Draw a diagram of a balanced translocation and explain why these generally not deleterious? A balanced translocation occurs when two pieces of DNA from the chromosomes become exchanged. These do not normally cause any negative effect if any, because all the DNA of both chromosomes is present. The ...
Chelatococcus sambhunathii sp. nov., a moderately thermophilic
Chelatococcus sambhunathii sp. nov., a moderately thermophilic

... (w/v) NaCl but not in the presence of 4 % NaCl. Antibiotic resistance of strain HT4T was checked on nutrient agar containing different concentrations of antibiotics. Strain HT4T was resistant to kanamycin (50 mg ml21) and neomycin (30 mg ml21), but was susceptible to streptomycin (25 mg ml21), chlor ...
Arabidopsis Gene and cDNA Encoding Cell
Arabidopsis Gene and cDNA Encoding Cell

... clone was identified by screening an A. thaliana cDNA library with exon 3 of the Atbfructl gene. The genomic clone Atbfructl is 4237 bp in size (Table I). Alignment of the Atbfructl gene sequence with that from its cognate cDNA showed the presence of seven exons. The organization of the gene is simi ...
DNA Methylation of Imprinted Loci on Autosomal Chromosomes and
DNA Methylation of Imprinted Loci on Autosomal Chromosomes and

... their parental origin. The functional significance of DNA methylation in genomic imprinting has been widely investigated and to date, around 100 imprinted genes have been identified in humans. To investigate, if methylation status of these “known” imprinting genes is associated with Parkinson’s dise ...
Molecular tools for breeding basidiomycetes
Molecular tools for breeding basidiomycetes

... markers into eleven linkage groups corresponding to the chromosomes resolved by PFGE analysis and which span a total of 1000.7 cM (Table 3). Table 3 shows the correlation between physical (measured in Mbp) and genetic (measured in cM) sizes, which suggests a random distribution of the anonymous mole ...
IS Elements
IS Elements

... between different DNA molecules. • Conjugative plasmids can move transposons that contain genes for antibiotic resistance from one bacterial cell to another. ...
Plasmid replication and control
Plasmid replication and control

... implications for medicine, since it has allowed rapid spread of antibiotic resistance throughout the microbial world. plasmids have been absolutely key to the development of gene cloning. In order for the plasmids to replicate independently within a cell, they must possess a stretch of DNA that can ...
HSV 1 & 2 - Scioto County Medical Society
HSV 1 & 2 - Scioto County Medical Society

... are defined by the nucleotide base sequences on their DNA or RNA.  For our purposes, each unique DNA or RNA sequence is loosely defined as a “target.” ...
CHROMOSOMES
CHROMOSOMES

Brooker Chapter 6
Brooker Chapter 6

... Therefore, the total number of wild-type phages is 11 X 106 or 11 million phages per milliliter Copyright ©The McGraw-Hill Companies, Inc. Permission required for reproduction or display ...
Neutralizing scFv Antibodies against Infectious Bursal Disease Virus
Neutralizing scFv Antibodies against Infectious Bursal Disease Virus

... genes Anti-VP2 scFv genes were ampli ied by PCR from plasmids containing the VP2binding clones i.e. B-display-s-1; B-display-s-12; B-display-s-17; B-display-s-19; B-display-s-25; B-display-s-29; B-display-s-30; B-display-s-32; B-display-s-38; B-display-s-40; B-display-s-50 and B-display-s-220 sub cl ...
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Genomic library



A genomic library is a collection of the total genomic DNA from a single organism. The DNA is stored in a population of identical vectors, each containing a different insert of DNA. In order to construct a genomic library, the organism's DNA is extracted from cells and then digested with a restriction enzyme to cut the DNA into fragments of a specific size. The fragments are then inserted into the vector using DNA ligase. Next, the vector DNA can be taken up by a host organism - commonly a population of Escherichia coli or yeast - with each cell containing only one vector molecule. Using a host cell to carry the vector allows for easy amplification and retrieval of specific clones from the library for analysis.There are several kinds of vectors available with various insert capacities. Generally, libraries made from organisms with larger genomes require vectors featuring larger inserts, thereby fewer vector molecules are needed to make the library. Researchers can choose a vector also considering the ideal insert size to find a desired number of clones necessary for full genome coverage.Genomic libraries are commonly used for sequencing applications. They have played an important role in the whole genome sequencing of several organisms, including the human genome and several model organisms.
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