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Southern Blot Analysis of Plasmids pRIT4501 and - RIT
Southern Blot Analysis of Plasmids pRIT4501 and - RIT

Production of carotenoids by recombinant DNA technology
Production of carotenoids by recombinant DNA technology

... organisms, which do not recognize GTG as an initiation codon, the beginning of the gene was changed to introduce an Nco I restriction site into the gene. This manipulation changed the GTG initiation codon to ATG, but it also changed the second amino acid from an Arg to a Gly residue. This version of ...
Who was Gregor Mendel and what did he do?
Who was Gregor Mendel and what did he do?

... o He called the dissimilar pair Sex chromosomes because he believed they determined the sex of the fly. o Found that certain traits such as eye colour in Fruit Flies are found on the X gene. This is what he called “sex-linkage”. Today, we call this “Sex-linked” genes or traits. Sex-Linked trait: A t ...
Ch - TeacherWeb
Ch - TeacherWeb

... than those that are close together. Polyploidy: the occurrence of one or more extra sets of all chromosomes in an organism i. ex. Triploid = 3 complete sets of chromosomes (3n) ii. rare in animals but sometimes occurs in earthworms and goldfish; lethal in humans iii. 1 in 3 flowering plants are poly ...
Genomic Databases for Tomato
Genomic Databases for Tomato

Carotene genes from cassava-pchavarriaga.pdf
Carotene genes from cassava-pchavarriaga.pdf

... corresponded to the signal peptide necessary for psy import into the chloroplast (figure 7). ...
Functional gene groups are concentrated within chromosomes
Functional gene groups are concentrated within chromosomes

CHAPTER 6
CHAPTER 6

... other in yellow. The B-DNA has one strand colored white and the other blue. The hole formed by the b-subunits (diameter 3.5 nm) is large enough to easily accommodate DNA (diameter 2.5nm) with no steric repulsion. The rest of polymerase III holoenzyme (“core” polymerase + g-complex) associates wi ...
Distortion of quantitative genomic and expression
Distortion of quantitative genomic and expression

... genomic DNA, in the presence and absence of Cot-1 DNA. Reactions were hybridized, washed, stained with SPE and then analyzed by flow cytometry. Quantitative PCR QPCR and data analysis were performed using the Chromo4 QPCR system (BioRad Laboratories, Hercules, CA). Primers and amplified intervals we ...
Transvection in 2012: Site-Specific Transgenes Reveal a
Transvection in 2012: Site-Specific Transgenes Reveal a

... N Drosophila, homologous chromosomes are paired in somatic cells (reviewed in McKee 2004), leading to the opportunity for regulatory DNA on one chromosome to influence the expression of a promoter located on the homologous chromosome (reviewed in Duncan 2002; Kennison and Southworth 2002). Such trans ...
Bacterial Transformation with Green Fluorescent Protein
Bacterial Transformation with Green Fluorescent Protein

... You will be transforming a bacterium, E. coli, which lives in the human gut. Genetically, E. coli is  relatively simple and well understood. Its genetic material consists mostly of one large circle of DNA  between 3‐5 million base pairs in length. Also present are small loops of DNA called plasmids, ...
Base excision repair
Base excision repair

... with the aid of PCNA and ligated by DNA ligase I. ...
Facts about the mini-Tn7 transposon system as a tool for
Facts about the mini-Tn7 transposon system as a tool for

Comprehensive genetic approaches to cleft lip/palate
Comprehensive genetic approaches to cleft lip/palate

... • Disrupts the central dogma of clefting that cleft lip only and cleft lip/palate one entity • “A” allele is additive in effect with AG ~ 1.7x and AA 2.4x increased risks • AP2 binding site mutation as etiologic and AP2 and IRF6 in same developmental path • Suggests a second common variant in South ...
Figure 2 - GEP Community Server
Figure 2 - GEP Community Server

... that mRNA is synthesized in a 5’ to 3’ direction, so the 5’ end of the mRNA was synthesized first. Let’s examine the beginning of the tra gene. Type "contig1:9,825-9,870" into the "position/search" textbox and then click on the "jump" button. In Module 2, we identified the transcription start site ( ...
module 3: transcription part ii
module 3: transcription part ii

INTRODUCTION - Office of the Gene Technology Regulator
INTRODUCTION - Office of the Gene Technology Regulator

... cannot be predicted but their phenotypes can be screened for the presence of the intended change.23 For SDN-2, the outcomes are more predictable than for SDN-1 due to the use of a template to direct repair of the DNA double-stranded break. The repair template is introduced to the cell at the same ti ...
University of Bucharest, Faculty of Biology, Molecular Biology Center
University of Bucharest, Faculty of Biology, Molecular Biology Center

... Figure 2. Electrophoresis pattern of amplified fragments after digestion with Ava I enzyme. Lines 1-7, two fragments of 108 and 28bp characteristic for homozygous cattle (BLAD); lines 1-7, three fragments of 51, 36 and 21bp characteristic for homozygous cattle (DUMPS). Line 8, molecular size marker ...
Lampbrush Chromosomes of the Chicken
Lampbrush Chromosomes of the Chicken

... more variable from animal to animal and even among similar sized oocytes from the same animal relative to the newt. The spread chromosome preparations were examined "live" with an inverted microscope and phase-contrast optics or, more routinely, as dry preparations before in situ hybridization or as ...
Using a Single-Nucleotide Polymorphism to Predict
Using a Single-Nucleotide Polymorphism to Predict

... If your "D" lane contains three bands, you have two different alleles for the TAS2R38 gene. An allele with a "G" at position 45 that is not cut by the restriction enzyme (the nontaster allele), and an allele with a "C" at position 45 that is cut by the restriction enzyme (the taster allele). You pro ...
MECP2, CDKL5 and FOXG1
MECP2, CDKL5 and FOXG1

... Rare (<1% of families) Occurs in both males and females No easy, non-invasive test Higher recurrence risk (?%) ...
Expansion of specialized metabolism
Expansion of specialized metabolism

... from whole amino acid sequences of each species. Pfam motifs used to detect CYP, DOX, and UGT proteins are p450 motif (Pfam ID: PF00067), 2OG-FeII_Oxy motif (PF03171) and DIOX_N motif (PF14226), and UDPGT motif (PF00201), respectively. The whole amino acid sequences are retrieved from PHYTOZOME9.0 ( ...
C8 Challenge
C8 Challenge

... Approximately what percentage of substances found by the Ames test to be mutagenic have been found to be carcinogenic in animals? ...
Use of a novel cassette to label phenotypically a cryptic plasmid of
Use of a novel cassette to label phenotypically a cryptic plasmid of

... microfuge tubes and 50 pl of protoplast suspension with 2-5 pl DNA, 150 pl PEG and 500 pl SPA could be used simply to transfer plasmids into a new strain. Estimation of plasmid stability. Stationary-phase cultures of bacteria carrying the plasmid under test were grown with antibiotic selection and t ...
5. Harmful mutations
5. Harmful mutations

... into another: a spliced viral DNA and bacterial DNA to create a plasmid with dual antibiotic resistance 1974 - Allan Maxam and Walter Gilbert (Harvard) and Frederick Sanger (U.K. Medical Research Council) independently developed different methods for sequencing DNA 1977 - Bacteriophage FX-174 (5368 ...
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Genomic library



A genomic library is a collection of the total genomic DNA from a single organism. The DNA is stored in a population of identical vectors, each containing a different insert of DNA. In order to construct a genomic library, the organism's DNA is extracted from cells and then digested with a restriction enzyme to cut the DNA into fragments of a specific size. The fragments are then inserted into the vector using DNA ligase. Next, the vector DNA can be taken up by a host organism - commonly a population of Escherichia coli or yeast - with each cell containing only one vector molecule. Using a host cell to carry the vector allows for easy amplification and retrieval of specific clones from the library for analysis.There are several kinds of vectors available with various insert capacities. Generally, libraries made from organisms with larger genomes require vectors featuring larger inserts, thereby fewer vector molecules are needed to make the library. Researchers can choose a vector also considering the ideal insert size to find a desired number of clones necessary for full genome coverage.Genomic libraries are commonly used for sequencing applications. They have played an important role in the whole genome sequencing of several organisms, including the human genome and several model organisms.
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