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Regulation of bolting and identification of the α
Regulation of bolting and identification of the α

... To further understand the transcriptional regulation and potential functions of BrTUA genes, the cis-elements of their promoter sequences were predicted. More than 50 cis-elements that could be classified into 27 types were found in the 1.5-kb upstream region of the BrTUA genes by Plant CARE. Five B ...
Distinct and stage specific nuclear factors regulate the expression of
Distinct and stage specific nuclear factors regulate the expression of

... repression in developing and mature gametocytes [11]. Based on these studies, it has been proposed that the developmental stages of malaria parasite require coordinated modulation of expression of distinct sets of genes, which could be achieved by transcriptional and/or posttranscriptional control. ...
Expression profiling reveals off
Expression profiling reveals off

... by single nucleotide changes in the siRNA sequence2,6, we would not have predicted that this limited degree of sequence similarity would be sufficient for transcript silencing. However, to test this possibility, we systematically substituted the nucleotide at each position of the siRNA sequence and ...
Developmental Biology BY1101 P. Murphy Lecture 10 Master
Developmental Biology BY1101 P. Murphy Lecture 10 Master

... 3. The first developmental genes were cloned in Drosophila and shown to encode transcription factors- the first Hox genes 4. Drosophila genes allowed access to vertebrate developmental genes because of the extremely high level of conservation of these genes during evolution. 5. Developmental regulat ...
Evolution of genes, evolution of species: the case of aminoacyl
Evolution of genes, evolution of species: the case of aminoacyl

... Methanobacterium thermoautotrophicum, and Methanococcus jannaschii (but not that from Sulfolobus solfataricus) and the LysRS from the spirochete Borrelia burgdorferi have been shown to be radically different from all the other LysRS’s (Ibba et al. 1997a, 1997b). These LysRS’s are grouped in cluster ...
Chromosomal Clustering of Periodically Expressed Genes
Chromosomal Clustering of Periodically Expressed Genes

... one missing value at time point j, the approach first finds 10 other oligonucleotides that have a value measured at time point j, with expression most similar to x at all other 45 time points. Then the weighted average of expression values for time point j from these 10 similar oligonucleotides is u ...
pdf
pdf

... regions to consider, with 51 unique flanking genes. There are 6 super-regions with at least 99 bp overlapping with ultra-conserved elements. At least one of the flanking genes for each of these 6 super-regions is a transcription factor located 1–314 kb away (IRX3, IRX5, IRX6, HOXD13, DMRT1, DMRT3, F ...
Meiotic markers of gonad development in zebrafish
Meiotic markers of gonad development in zebrafish

... Mechanism of sex determination unknown No sex chromosomes found Possible genetic sex determination influenced by environment ? Juvenile hermaphrodites with separate sexes in adults ...
Genetic Diversity of Rhizobium leguminosarum as Revealed
Genetic Diversity of Rhizobium leguminosarum as Revealed

... Al-Dakahlia) formed one group in addition to isolate from Beni Suef which is about 224 kilometer (Km) from Al-Dakahlia. On the other hand, the grouping pattern of the remaining isolates was rather puzzling. Isolates from Zefta and South Sinai formed one group with 100% bootstrap support although the ...
Salmonella typhimurium
Salmonella typhimurium

... GenMAPP (Gene Map Annotator and Pathway Profiler) is a free computer application for viewing and analyzing DNA microarray and other genomic and proteomic data on biological pathways. MAPPFinder is an accessory program that works with GenMAPP and Gene Ontology to identify global biological trends in ...
Dosyayı İndir
Dosyayı İndir

... The order of genes along the chromosome can be deduced by determining the genes transferred during short matings vs. those transferred during long matings Copyright ©The McGraw-Hill Companies, Inc. Permission required for reproduction or display ...
coat and colour - The Dachshund Breed Council UK
coat and colour - The Dachshund Breed Council UK

... however it is the predominant colour of Wirehaired Dachshunds where it is known as Wild Boar (commonly called Brindle in the UK) it is caused by a dominant gene, therefore dogs only need one copy of the Sable gene to be a sable. To breed a sable one parent must be a sable/wild boar. Most recessive s ...
Name - IISME Community Site
Name - IISME Community Site

... Find the RT-PCR data file on your computer and open this file. RT-PCR data can show you the change in reaction fluorescence (Rn), which is the readout of fluorescence data for each reaction. However, this is a lot of information to filter through. Partly, this is because the reporter dye’s fluoresc ...
Structure and evolution of Apetala3, a sex
Structure and evolution of Apetala3, a sex

... centromere stimulate early stages of stamen development [13]. More recently, molecular markers in combination with a panel of deletion mutants were used to create a detailed map of the Y chromosome [14-16]. Gene and genome duplications have been recognized as major forces driving the evolution of an ...
A global view of pleiotropy and phenotypically
A global view of pleiotropy and phenotypically

... sporulation, ergosterol biosynthesis, phosphate metabolism, and DNA replication. Thus, similar to the grouping of genes required for growth in only a single condition, our biclustering of highly pleitropic genes was able to provide further information about general responses such as multidrug resist ...
What can whole genome expression data tell us about the ecology
What can whole genome expression data tell us about the ecology

... insights into the proximate mechanisms underlying personality, as well as its evolutionary consequences. After introducing the basics of whole genome expression analysis, we show how whole genome expression data can be used to understand whether behaviours in different contexts are affected by the s ...
abstracts
abstracts

... The fruit from modern sweet cherry (Prunus avium L.) cultivars is dramatically larger and has better quality than the fruit from its undomesticated relative, the wild forest cherry (syn. mazzard cherry). Improvements in fruit size and quality can be attributed to both trait improvements associated w ...
A global view of pleiotropy and phenotypically derived gene function
A global view of pleiotropy and phenotypically derived gene function

... sporulation, ergosterol biosynthesis, phosphate metabolism, and DNA replication. Thus, similar to the grouping of genes required for growth in only a single condition, our biclustering of highly pleitropic genes was able to provide further information about general responses such as multidrug resist ...
3. Holmans P, Green EK, Pahwa JS, Ferreira MA, Purcell SM
3. Holmans P, Green EK, Pahwa JS, Ferreira MA, Purcell SM

... Subject vs SNP label permutations. A factor which may introduce bias in pathway association analyses is pathway size, i.e. the number of SNPs that are mapped to the pathway. For small pathways, the results may be influenced by single-SNP effects, and for larger pathways, chance associations may be o ...
1 Evolution of Sex-Biased Genes 1. Background Sexual dimorphism
1 Evolution of Sex-Biased Genes 1. Background Sexual dimorphism

... a) Male-male competition – males use these traits to compete with each other for food, territory, access to females, etc. b) Female choice – females prefer to mate with males with “attractive” phenotypes. In general, traits involved in male-reproduction (either directly or indirectly) tend to evolve ...
Supplemental File S3. Homologous Chromosomes
Supplemental File S3. Homologous Chromosomes

... chromosome map shown. Each map represents a physical chromosome and provides information about the chromosome, such as the array of genes on the chromosome. ...
The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI.
The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI.

... through interaction with small GTP-binding proteins20. We found that 74.57% of the chromosomal DNA is involved in the coding of ORFs. These 497 ORFs have an average size of 474 codons, close to the average values seen for other large chromosomes3,4,15. Of the 487 ORFs that are not Ty related, 251 ar ...
Of dups and dinos:
Of dups and dinos:

... than the existing diploids [3,35]. The massive loss of plant life likely resulted in more fragmented, isolated and small populations, which could suffer from the negative effects of genetic bottlenecks such as increased drift and inbreeding. Polyploidy could have provided several benefits in such po ...
Genotype to Phenotype v2 - Avida-ED
Genotype to Phenotype v2 - Avida-ED

... organism in the virtual Petri dish and see some information about what traits its genotype produces by looking in its Stats box. In the screenshot above, for instance, the selected magenta-colored organism in the dish (the organism’s cell is outlined in green) with the genome named aadeb is displaye ...
reviews
reviews

... As more whole-genome sequences become available, it is becoming increasingly important to understand the forces that have shaped their organization. Here, we review the mechanisms that lead to retention versus loss of duplicated genes and consider the broader implications at both a genetic and an ev ...
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Pathogenomics

Pathogen infections are among the leading causes of infirmity and mortality among humans and other animals in the world. Until recently, it has been difficult to compile information to understand the generation of pathogen virulence factors as well as pathogen behaviour in a host environment. The study of Pathogenomics attempts to utilize genomic and metagenomics data gathered from high through-put technologies (e.g. sequencing or DNA microarrays), to understand microbe diversity and interaction as well as host-microbe interactions involved in disease states. The bulk of pathogenomics research concerns itself with pathogens that affect human health; however, studies also exist for plant and animal infecting microbes.
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