Abstract book - Belgian Society for Microbiology
... relationship between differences in gene content and sequence and ecological divergence in ecosystem context, we investigated links between genotype and ecology of two populations of Leptospirillum Group II bacteria in comprehensively characterized natural acidophilic biofilm communities. These popu ...
... relationship between differences in gene content and sequence and ecological divergence in ecosystem context, we investigated links between genotype and ecology of two populations of Leptospirillum Group II bacteria in comprehensively characterized natural acidophilic biofilm communities. These popu ...
Polymerase chain reaction and its applications
... interest. Genomic DNA can be amplif|ed using a primer that creates a specif|c restriction site within either one of the alleles that is not present in the other allele. Sequence variation can then be analysed using restriction digestion.This method can be used to type specif|c alleles at a polymorph ...
... interest. Genomic DNA can be amplif|ed using a primer that creates a specif|c restriction site within either one of the alleles that is not present in the other allele. Sequence variation can then be analysed using restriction digestion.This method can be used to type specif|c alleles at a polymorph ...
Veritas myGenome Informed Consent Form
... The clinical significance of certain data is still unclear and may become more defined over time. There are gene variants which have yet to be discovered (which may be associated with disease) and will, therefore, not be reported to me at this time. Genetic counseling is available to me to learn mo ...
... The clinical significance of certain data is still unclear and may become more defined over time. There are gene variants which have yet to be discovered (which may be associated with disease) and will, therefore, not be reported to me at this time. Genetic counseling is available to me to learn mo ...
Normalization between a pair of arrays
... Based on number of genes (B) Based on number regulatory interactions ...
... Based on number of genes (B) Based on number regulatory interactions ...
Microarray Analysis 3
... A lot of distance/similarity metrics Which clustering algorithm runs faster and uses less memory? How many clusters after all? Are the clusters stable? Are the clusters meaningful? ...
... A lot of distance/similarity metrics Which clustering algorithm runs faster and uses less memory? How many clusters after all? Are the clusters stable? Are the clusters meaningful? ...
Table II Transformation of various derived strains OSU Strain Outcrossed with
... 30: 17) of an inl,rg N. crassa strain (R2506), according to the procedure of Case (1982 in: Genetic Engineering of Microorganisms for Chemicals, eds. Hollaender et al. pp. 87-100 Plenum, New York) with slight modifications. Two inl+ transformants (Tl and T3) were obtained. They were back-crossed to ...
... 30: 17) of an inl,rg N. crassa strain (R2506), according to the procedure of Case (1982 in: Genetic Engineering of Microorganisms for Chemicals, eds. Hollaender et al. pp. 87-100 Plenum, New York) with slight modifications. Two inl+ transformants (Tl and T3) were obtained. They were back-crossed to ...
ARTICLE IN PRESS
... culture-dependent and culture-independent approaches are typically applied. Culture-dependent approaches represent the only means of recovering microorganisms from the fermented substrate [50], although it is widely recognized that they do not allow analysis of true diversity and/or population dynam ...
... culture-dependent and culture-independent approaches are typically applied. Culture-dependent approaches represent the only means of recovering microorganisms from the fermented substrate [50], although it is widely recognized that they do not allow analysis of true diversity and/or population dynam ...
Some computing solutions to your data problems
... • AIM: find genes active in cancer growth • Take mouse samples and apply to a microarray slide • Measure trends in gene expression, identify 400 genes of interest • Use public web databases to interpret information on 400 genes (interpreting 100 genes took 6 months, now the information is out of dat ...
... • AIM: find genes active in cancer growth • Take mouse samples and apply to a microarray slide • Measure trends in gene expression, identify 400 genes of interest • Use public web databases to interpret information on 400 genes (interpreting 100 genes took 6 months, now the information is out of dat ...
The new genes of rice: a closer look
... genome sequences, we would have expected that the astonishing finding of ,20 000 unmatched genes in rice would have attracted the attention of at least two large groups of research workers. One group would have been those involved in exploiting the new information on genes and chromosomal sequences ...
... genome sequences, we would have expected that the astonishing finding of ,20 000 unmatched genes in rice would have attracted the attention of at least two large groups of research workers. One group would have been those involved in exploiting the new information on genes and chromosomal sequences ...
- Horizon Discovery
... Using these cell lines, we have created several Multiplex Reference Standards containing many commonly assayed cancer mutations. These are generated either by blending cell line derived genomic DNA that has been precisely quantified, or by mixing the cells themselves to produce a cell pellet that is ...
... Using these cell lines, we have created several Multiplex Reference Standards containing many commonly assayed cancer mutations. These are generated either by blending cell line derived genomic DNA that has been precisely quantified, or by mixing the cells themselves to produce a cell pellet that is ...
recBCD
... Biological Roles for Recombination 1. Deleterious mutations would accumulate in each chromosome. Recombination generates genetic diversity 多样性 2. Generating new gene/allele combinations (crossing over during meiosis) 3. Integration of a specific DNA element 4. Role in DNA damage and repair 5. Gene ...
... Biological Roles for Recombination 1. Deleterious mutations would accumulate in each chromosome. Recombination generates genetic diversity 多样性 2. Generating new gene/allele combinations (crossing over during meiosis) 3. Integration of a specific DNA element 4. Role in DNA damage and repair 5. Gene ...
BLAST_and_Genome_Browser_tutorial
... these features are sequenced genetic markers, ESTs, cDNAs, CDSs, genes, insertion and repeat elements. The browser is another option for investigating the organization of rice and other cereal genomes besides the CMap section of Gramene. The software application was developed by the Ensembl project ...
... these features are sequenced genetic markers, ESTs, cDNAs, CDSs, genes, insertion and repeat elements. The browser is another option for investigating the organization of rice and other cereal genomes besides the CMap section of Gramene. The software application was developed by the Ensembl project ...
Document
... Here, we present a high-efficiency and easily-used analysis pipeline called MeRIP-PF, which is a publicly available open source and specially developed for MeRIP-Seq peak-calling with control samples. MeRIP-PF achieves m6A regions detection and annotation, and powerful graphical display which are us ...
... Here, we present a high-efficiency and easily-used analysis pipeline called MeRIP-PF, which is a publicly available open source and specially developed for MeRIP-Seq peak-calling with control samples. MeRIP-PF achieves m6A regions detection and annotation, and powerful graphical display which are us ...
DNA technology
... Altering the genetic makeup of organisms by giving them recombinant DNA BENEFITS TO HUMANS: Increasing the yield from animals or plant crop Creating more nutrient rich food Making crops resistant to disease, pests, herbicides and environmental changes Producing vaccines and medicines Industrial proc ...
... Altering the genetic makeup of organisms by giving them recombinant DNA BENEFITS TO HUMANS: Increasing the yield from animals or plant crop Creating more nutrient rich food Making crops resistant to disease, pests, herbicides and environmental changes Producing vaccines and medicines Industrial proc ...
short communication
... amino acids embedded in the middle of its coding region. These findings suggest that the α - and β -forms were alternatively spliced; however, other possibilities such as being generated by different promoters or even by different genes needed investigation. Although both forms were selectively expr ...
... amino acids embedded in the middle of its coding region. These findings suggest that the α - and β -forms were alternatively spliced; however, other possibilities such as being generated by different promoters or even by different genes needed investigation. Although both forms were selectively expr ...
Murine herpesvirus 68 is genetically related to the
... former argument is the observation that the genomes of both M D V and H V T exhibit no deficiencies in the frequency o f C p G dinucleotides, thus raising doubts as to the epidemiological significance of methylated virus D N A found within transformed lymphocytes (Honess et al., 1989a). Thus, the na ...
... former argument is the observation that the genomes of both M D V and H V T exhibit no deficiencies in the frequency o f C p G dinucleotides, thus raising doubts as to the epidemiological significance of methylated virus D N A found within transformed lymphocytes (Honess et al., 1989a). Thus, the na ...
Chemical Agents
... isolate in vitro under standardized conditions. • It is determined by finding the lowest dilution without visible growth during serial dilution testing. This will vary for individual isolates. ...
... isolate in vitro under standardized conditions. • It is determined by finding the lowest dilution without visible growth during serial dilution testing. This will vary for individual isolates. ...
myGridIntroduction - School of Computer Science
... Feta has been available for over a year Only just been included in the release Need critical mass of service annotations before release By demonstrating the use of service annotation, we aim to encourage service providers to provide the annotations in the future ...
... Feta has been available for over a year Only just been included in the release Need critical mass of service annotations before release By demonstrating the use of service annotation, we aim to encourage service providers to provide the annotations in the future ...
Affymetrix Data analysis
... 7.1. The scatterplot is a visualization that is useful for assessing the variation (or reproducibility, depending on how you look at it) between chips. We can look at all probes, the perfect match probes only, the mismatch probes only, and of course also at the normalized, probe-set-summarized data. ...
... 7.1. The scatterplot is a visualization that is useful for assessing the variation (or reproducibility, depending on how you look at it) between chips. We can look at all probes, the perfect match probes only, the mismatch probes only, and of course also at the normalized, probe-set-summarized data. ...
The purB gene of Escherichia coli K-12 is
... the DNA products were analysed on 6 % (w/v) denaturing polyacrylamide gels alongside either sequencing ladders or the end-labelled DNA size markers (Hi& fragments of 4x174 DNA) provided. Five primers were synthesized (see above). These hybridize to, and initiate reverse transcription from, RNA at sp ...
... the DNA products were analysed on 6 % (w/v) denaturing polyacrylamide gels alongside either sequencing ladders or the end-labelled DNA size markers (Hi& fragments of 4x174 DNA) provided. Five primers were synthesized (see above). These hybridize to, and initiate reverse transcription from, RNA at sp ...
Tan, Elyn C.: A Critical Review of Statistical Methods for Differential Analysis of 2-sample Microarrays
... A Critical Review of Statistical Methods for Differential Analysis of 2-sample Microarrays The advent of microarray technology has made it possible to study the variation of expression for many genes simultaneously. The most common types of microarray experiments involve the comparison of gene expr ...
... A Critical Review of Statistical Methods for Differential Analysis of 2-sample Microarrays The advent of microarray technology has made it possible to study the variation of expression for many genes simultaneously. The most common types of microarray experiments involve the comparison of gene expr ...
What Makes the “Blue” in Blueberries?
... • Myb proteins are defined by the Myb Domain • Sequence of approximately 50 amino acids • Can be repeated up to three times • Repeat domains are imperfect, but highly conserved ...
... • Myb proteins are defined by the Myb Domain • Sequence of approximately 50 amino acids • Can be repeated up to three times • Repeat domains are imperfect, but highly conserved ...
The Problem of Culture-Negative Infections
... initially caught our attention because they persisted in the face of active host defenses and because they are very profoundly resistant to conventional antibiotic therapy (Costerton et al. 1999). But another characteristic of biofilm infections soon began to emerge, which was that cultures were ver ...
... initially caught our attention because they persisted in the face of active host defenses and because they are very profoundly resistant to conventional antibiotic therapy (Costerton et al. 1999). But another characteristic of biofilm infections soon began to emerge, which was that cultures were ver ...
Exome sequencing as a tool for Mendelian disease gene discovery
... The basic steps required for exome sequencing are shown in the figure. Genomic DNA is randomly sheared, and several micrograms are used to construct an in vitro shotgun library; the library fragments are flanked by adaptors (not shown). Next, the library is enriched for sequences corresponding to ex ...
... The basic steps required for exome sequencing are shown in the figure. Genomic DNA is randomly sheared, and several micrograms are used to construct an in vitro shotgun library; the library fragments are flanked by adaptors (not shown). Next, the library is enriched for sequences corresponding to ex ...
Metagenomics
Metagenomics is the study of genetic material recovered directly from environmental samples. The broad field may also be referred to as environmental genomics, ecogenomics or community genomics. While traditional microbiology and microbial genome sequencing and genomics rely upon cultivated clonal cultures, early environmental gene sequencing cloned specific genes (often the 16S rRNA gene) to produce a profile of diversity in a natural sample. Such work revealed that the vast majority of microbial biodiversity had been missed by cultivation-based methods. Recent studies use either ""shotgun"" or PCR directed sequencing to get largely unbiased samples of all genes from all the members of the sampled communities. Because of its ability to reveal the previously hidden diversity of microscopic life, metagenomics offers a powerful lens for viewing the microbial world that has the potential to revolutionize understanding of the entire living world. As the price of DNA sequencing continues to fall, metagenomics now allows microbial ecology to be investigated at a much greater scale and detail than before.