Changes in chemical composition in male turkeys
... When the scale parameter b differs from unity, the content increases (b >1) or decreases (b <1) with increasing mass. The allometric analysis differs from the ANOVA in that mass (and not age) is seen as a driving force for potential changes in composition. Several authors have reported important cha ...
... When the scale parameter b differs from unity, the content increases (b >1) or decreases (b <1) with increasing mass. The allometric analysis differs from the ANOVA in that mass (and not age) is seen as a driving force for potential changes in composition. Several authors have reported important cha ...
Selected Reaction Monitoring (SRM) to determine protein
... particularly difficult in plant research where only a limited number of antibodies are available. This problem is enhanced when studying gene families or different proteins derived from the same gene (isoforms), as many antibodies cross-react with more than one protein. We show that utilizing Select ...
... particularly difficult in plant research where only a limited number of antibodies are available. This problem is enhanced when studying gene families or different proteins derived from the same gene (isoforms), as many antibodies cross-react with more than one protein. We show that utilizing Select ...
Full-Text PDF
... have found that the triolide of R-3HB forms crown ester complexes with alkali metals; Burger and Seebach [39] have shown that oligomers of R-3HB transport alkali and alkaline earth salts across methylene chloride layers in U-tubes; Seebach et al. [40] have demonstrated that PHB of 16 residues or mul ...
... have found that the triolide of R-3HB forms crown ester complexes with alkali metals; Burger and Seebach [39] have shown that oligomers of R-3HB transport alkali and alkaline earth salts across methylene chloride layers in U-tubes; Seebach et al. [40] have demonstrated that PHB of 16 residues or mul ...
Amino Acids, Peptides, and Proteins
... that ionize near pH 8): the amino-terminal a-amino group of Glu and the His imidazole group. Thus, we can estimate ...
... that ionize near pH 8): the amino-terminal a-amino group of Glu and the His imidazole group. Thus, we can estimate ...
Characterizing the complexity of enzymes on the basis of their
... complexity and determine the total number of reactions in vivo, and thus the potential size of the MACiE database, we estimated the number of protein families per EC node on the basis of sequence data (for an upper limit) and structures (for a lower limit). Although this approach does not take into ...
... complexity and determine the total number of reactions in vivo, and thus the potential size of the MACiE database, we estimated the number of protein families per EC node on the basis of sequence data (for an upper limit) and structures (for a lower limit). Although this approach does not take into ...
STRUCTURAL AND FUNCTIONAL STUDIES OF PYRIDOXINE 5’-PHOSPHATE SYNTHASE E. COLI Doctoral Thesis
... Pyridoxal 5’-phosphate is the biocatalytically active form of vitamin B6, being one of nature’s most versatile cofactors that plays a central role in the metabolism of amino acids. Whereas microorganisms and plants can synthetise vitamin B6 de novo, mammals have to obtain one of the B6 vitamers with ...
... Pyridoxal 5’-phosphate is the biocatalytically active form of vitamin B6, being one of nature’s most versatile cofactors that plays a central role in the metabolism of amino acids. Whereas microorganisms and plants can synthetise vitamin B6 de novo, mammals have to obtain one of the B6 vitamers with ...
Self-Subunit Swapping Occurs in Another Gene Type of Cobalt
... with the primers A-up and P14K-down (Table 1). The PCR products were digested with NdeI and EcoRI, ligated into pET24a(+) to construct pET-A-B-P14K (Fig. 2), transformed into E. coli JM109, and sequenced. The clones with the correct sequences were transformed into E. coli BL21 (DE3). An overlap exte ...
... with the primers A-up and P14K-down (Table 1). The PCR products were digested with NdeI and EcoRI, ligated into pET24a(+) to construct pET-A-B-P14K (Fig. 2), transformed into E. coli JM109, and sequenced. The clones with the correct sequences were transformed into E. coli BL21 (DE3). An overlap exte ...
BI25M1
... to make agricultural fertilizer, which needs: an iron catalyst, 5000C and 300 atmospheres.] ...
... to make agricultural fertilizer, which needs: an iron catalyst, 5000C and 300 atmospheres.] ...
Peer-reviewed Article PDF
... polyamine biosynthetic pathway enzymes of T. brucei [17]. ZINC database is a free chemical database, consisting of nearly 13 million small commercially available molecules [18]. With the help of advanced computational biology, an arduous task of in-vitro testing of ODC inhibitors has been reduced dr ...
... polyamine biosynthetic pathway enzymes of T. brucei [17]. ZINC database is a free chemical database, consisting of nearly 13 million small commercially available molecules [18]. With the help of advanced computational biology, an arduous task of in-vitro testing of ODC inhibitors has been reduced dr ...
proteins
... • a by-product at (cottage) cheese production • yellowish liquid (the colour comes from riboflavin) • cca 12 % of high quality proteins (lactoalbumin, lactoglobulins) • rich in other B-complex vitamins and lactose • dried whey is available in shops (esp. fitness centres) ...
... • a by-product at (cottage) cheese production • yellowish liquid (the colour comes from riboflavin) • cca 12 % of high quality proteins (lactoalbumin, lactoglobulins) • rich in other B-complex vitamins and lactose • dried whey is available in shops (esp. fitness centres) ...
Characterisation of the novel proteins expressed in corn line 1507
... toxic to humans, including in acute animal toxicity tests. For Cry1F, no adverse effects were observed in mice at doses up to 576 mg/kg body weight. In a similar study using PAT, no adverse effects were observed in mice at doses up to 5000 mg/kg body weight. In addition, there is no amino acid seque ...
... toxic to humans, including in acute animal toxicity tests. For Cry1F, no adverse effects were observed in mice at doses up to 576 mg/kg body weight. In a similar study using PAT, no adverse effects were observed in mice at doses up to 5000 mg/kg body weight. In addition, there is no amino acid seque ...
Homology Modeling a Fast Tool for Drug Discovery
... of alignment by modeling strongly depends on the degree of sequence similarity. Misalignment of the models some time results into the errors which may be hard to remove at the later stages of refinement[59]. Loop modeling: Homologous proteins have gaps or insertions in sequences, referred to as loop ...
... of alignment by modeling strongly depends on the degree of sequence similarity. Misalignment of the models some time results into the errors which may be hard to remove at the later stages of refinement[59]. Loop modeling: Homologous proteins have gaps or insertions in sequences, referred to as loop ...
Prokaryotic orthologues of mitochondrial alternative oxidase and plastid terminal oxidase
... The mitochondrial alternative oxidase (AOX) and the plastid terminal oxidase (PTOX) are two similar members of the membrane-bound diiron carboxylate group of proteins. AOX is a ubiquinol oxidase present in all higher plants, as well as some algae, fungi, and protists. It may serve to dampen reactive ...
... The mitochondrial alternative oxidase (AOX) and the plastid terminal oxidase (PTOX) are two similar members of the membrane-bound diiron carboxylate group of proteins. AOX is a ubiquinol oxidase present in all higher plants, as well as some algae, fungi, and protists. It may serve to dampen reactive ...
Physical and chemical interactions between aphids and plants
... most likely candidates for fast plugging events. There is a variety of protein forms in the sieve tubes. Presumably most of the phloem-specific proteins are in a soluble form in the phloem sap, a few are present as insoluble deposits along the SE plasma membrane of dicotyledons, while again others a ...
... most likely candidates for fast plugging events. There is a variety of protein forms in the sieve tubes. Presumably most of the phloem-specific proteins are in a soluble form in the phloem sap, a few are present as insoluble deposits along the SE plasma membrane of dicotyledons, while again others a ...
Amino acid residues that determine functional specificity of NADP
... NADP-IDH from E.coli, Swiss-Prot P08200). The overlap of the three sets of predicted SDPs is shown in Figure 2. The third comparison produces a larger number of SDPs than the first two, although z-scores for them are not so high. One can describe four-group SDPs roughly as a union of cofactor-specific ...
... NADP-IDH from E.coli, Swiss-Prot P08200). The overlap of the three sets of predicted SDPs is shown in Figure 2. The third comparison produces a larger number of SDPs than the first two, although z-scores for them are not so high. One can describe four-group SDPs roughly as a union of cofactor-specific ...
Figure S11: Linear motif placement in conserved disorder
... We calculated PPI degree by combining two AP/MS high-throughput studies [59,60], and one yeast two-hybrid study [61]. In figure S1, we plot the mean PPI degree of the GI hubs in the labeled percentile bins. ...
... We calculated PPI degree by combining two AP/MS high-throughput studies [59,60], and one yeast two-hybrid study [61]. In figure S1, we plot the mean PPI degree of the GI hubs in the labeled percentile bins. ...
Investigating semantic similarity measures across the
... “granum”, (GO:0009542) becomes a kind of “cellular component”, (GO:0005575), rather than a kind of a “chloroplast component”), but this ontological sleight of hand made our semantic measurement possible. It is also unclear how we should address the different link types. Except where stated explicitl ...
... “granum”, (GO:0009542) becomes a kind of “cellular component”, (GO:0005575), rather than a kind of a “chloroplast component”), but this ontological sleight of hand made our semantic measurement possible. It is also unclear how we should address the different link types. Except where stated explicitl ...
Isotope-labeled Peptides
... QUAntification of proteins), rely on peptides containing heavy isotopes rather than linkers or tags. The labeled peptides are chosen to mimic proteolytic fragments of a protein to be measured, and then used as quantitative internal standards. MRM has been used to detect and quantify low abundance pr ...
... QUAntification of proteins), rely on peptides containing heavy isotopes rather than linkers or tags. The labeled peptides are chosen to mimic proteolytic fragments of a protein to be measured, and then used as quantitative internal standards. MRM has been used to detect and quantify low abundance pr ...
Anaerobic protists and hidden mitochondria
... upon closer inspection there is a common ground and that is the organisms’ loosely categorized into these two camps often lack mitochondria and have in several instances mitochondrial remnant organelles. Linked to the lack of recognizable mitochondria is the fact that many of the representatives in ...
... upon closer inspection there is a common ground and that is the organisms’ loosely categorized into these two camps often lack mitochondria and have in several instances mitochondrial remnant organelles. Linked to the lack of recognizable mitochondria is the fact that many of the representatives in ...
Integrative Assignment
... tissue to crystalize… this is formally all we can say about the structure of Cytochrome b from human mitochondria. However, it is less challenging to obtain a large amount of beef heart mitochondria from slaughter houses. The mitochondria are first purified away from other cellular components. Then ...
... tissue to crystalize… this is formally all we can say about the structure of Cytochrome b from human mitochondria. However, it is less challenging to obtain a large amount of beef heart mitochondria from slaughter houses. The mitochondria are first purified away from other cellular components. Then ...
endoplasmic reticulum stress and lipid metabolism
... There is accumulating evidence, from yeast and mammalian model systems, that loss of lipid homeostasis causes ER stress and that the UPR is an important sensor of changes in ER mem ...
... There is accumulating evidence, from yeast and mammalian model systems, that loss of lipid homeostasis causes ER stress and that the UPR is an important sensor of changes in ER mem ...
Metabolic rate depression in animals
... Hochachka & Lutz, 2001; Jackson, 2001). In most of the cases of hypometabolism cited above, metabolic rate is lowered to between 5 and 40 % of the resting rate of the normal animal and most experience little or no change to the internal environment of their cells and organs so that arousal can be ra ...
... Hochachka & Lutz, 2001; Jackson, 2001). In most of the cases of hypometabolism cited above, metabolic rate is lowered to between 5 and 40 % of the resting rate of the normal animal and most experience little or no change to the internal environment of their cells and organs so that arousal can be ra ...
Interactome
In molecular biology, an interactome is the whole set of molecular interactions in a particular cell. The term specifically refers to physical interactions among molecules (such as those among proteins, also known as protein-protein interactions) but can also describe sets of indirect interactions among genes (genetic interactions). Mathematically, interactomes are generally displayed as graphs.The word ""interactome"" was originally coined in 1999 by a group of French scientists headed by Bernard Jacq. Though interactomes may be described as biological networks, they should not be confused with other networks such as neural networks or food webs.