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Folie 1 - FLI
Folie 1 - FLI

... Structural genomics consists in the determination of the three dimensional structure of all proteins of a given organism, by experimental methods such as X-ray crystallography, NMR spectroscopy or computational approaches such as homology modelling. As opposed to traditional structural biology, the ...


... 11. (6 pts) Please do one of the following choices. Do all parts within a choice. Choice A: Using immunoglobulins (antibodies) as an example, briefly describe: i) quaternary structure ii) protein domains/motifs. Choice B: Draw a “cartoon” diagram of an antibody and indicate on your diagram the follo ...
Nephrotic Syndrome - BlueGrass Renal Care
Nephrotic Syndrome - BlueGrass Renal Care

... the plasma to leak into the urine in large amounts, which reduces the amount of protein in your blood. Since the protein in the blood helps keep fluid in the bloodstream, some of this fluid leaks out of the bloodstream into your tissues, causing swelling, called edema. The swelling may be most notic ...
Analysis of hepatocyte nuclear factor
Analysis of hepatocyte nuclear factor

... A-agarose beads (Bethesda Research Labs) and 5 p1 of affinitypurified antibodies specific to HNF-3a or HNF-3f, and then resolved by electrophoresis on 9% SDS-PAGE gels, followed by autoradiography. The immune precipitated phosphorylated HNF-3 protein was fractionated by SDS-PAGE and electrotransferr ...
EXAM 1 learning objectives
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... Be able to recognize functional groups Describe the importance of stereospecificity & the use of stereoisomers in biochemistry Be able to pick out a chiral center Describe the five types of biochemical reactions Describe the characteristics of water Describe how important hydrogen bonding is in biom ...
mRNA and protein abundance for glutathione-S
mRNA and protein abundance for glutathione-S

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Lipid Rafts Presentation
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Investigation of the role of hydrogen peroxide throughout cell cycle
Investigation of the role of hydrogen peroxide throughout cell cycle

... Requirement of H2O2 molecules for mitotic progression and the molecular mechanism by which increased H2O2 molecules control mitotic progression are poorly understood. Proteins associated with the centrosome play key roles in mitotic progression in mammalian cells. The activity of Cdk1-opposing phosp ...
Complete Protocol
Complete Protocol

... this system, fluorescently labeled lysine residues are incorporated into nascent proteins during translation, eliminating the requirement for labeling with [35S] methionine or other radioactive amino acids. The fluorescent lysine is added to the translation reaction as a charged epsilon-labeled fluores ...
Egg Components Dong Ahn Animal Science Department Iowa State University
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... enzyme which had lytic action against bacterial cells • Also known as muramidase and N‐acetylmuramic‐hydrolase and is one of the oldest egg components to be utilised commercially  • A bacteriolytic enzyme commonly found in nature and is  present in almost all secreted body fluids and tissues of  hum ...
Explain advantages of Carbohydrates Lipids Proteins
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Novel Multiprotein Complexes Identified in the Hyperthermophilic
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... tandem affinity purification methods have also been used extensively (17–21), but the tags can disrupt native proteinprotein interactions, and the methods tend to be biased toward proteins that interact with high affinity and/or proteins of high abundance (10). The major limitation with all of these ...
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...  Proteins have many different functions in the body, from providing structure, to enzymes, to energy sources. We will consider several of them here. (1) Enzymes: All enzymes are globular proteins which catalyze biochemical reactions  Amylase is an enzyme which catalyzes the breakup of starch into ...
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... significantly improved the fragmentation rate of peptide features. Similarly, several efforts have been made at improving sample preparation in order to enlarge the population of targeted peptide features. These efforts include refinements in protein isolation and extraction [5], new multidimensiona ...
Structure and biosynthesis of the signal
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... The signal-sequence receptor (SSR) has previously been shown to be a component of the environment which nascent polypeptides meet on passage through the endoplasmic reticulum (ER) membrane. We report here on the primary structure of the SSR as deduced from cDNA clones and from direct protein sequenc ...
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Chapters 29-30: Other Separation Methods
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Granny Guide
Granny Guide

... the exchanges are decreased and if there is too little phenylalanine in the blood then the exchanges may be increased. The majority of children will not have their exchanges increased or decreased significantly as they get older, as the body only requires a very small amount of phenylalanine to func ...
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...  Page 2 of this exam contains information that may be useful to you: (a) abbreviations for the amino acids; (b) pKa values of functional groups; and (c) table of logarithms.  A simple calculator is supplied for your use during this exam. No other electronic or computational devices are to be used. ...
Amino Acid Sequence Homology of Coat Proteins as a Basis for
Amino Acid Sequence Homology of Coat Proteins as a Basis for

Influenza Virus and HIV Cell Entry
Influenza Virus and HIV Cell Entry

... myotubes involves the formation of synaptic components as well as other muscle-specific molecules such as the cytoskeletal components actin and myosin and their associated proteins. ...
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Western blot



The western blot (sometimes called the protein immunoblot) is a widely used analytical technique used to detect specific proteins in a sample of tissue homogenate or extract. It uses gel electrophoresis to separate native proteins by 3-D structure or denatured proteins by the length of the polypeptide. The proteins are then transferred to a membrane (typically nitrocellulose or PVDF), where they are stained with antibodies specific to the target protein. The gel electrophoresis step is included in western blot analysis to resolve the issue of the cross-reactivity of antibodies.There are many reagent companies that specialize in providing antibodies (both monoclonal and polyclonal antibodies) against tens of thousands of different proteins. Commercial antibodies can be expensive, although the unbound antibody can be reused between experiments. This method is used in the fields of molecular biology, immunogenetics and other molecular biology disciplines. A number of search engines, such as CiteAb, Antibodypedia, and SeekProducts, are available that can help researchers find suitable antibodies for use in western blotting.Other related techniques include dot blot analysis, immunohistochemistry and immunocytochemistry where antibodies are used to detect proteins in tissues and cells by immunostaining, and enzyme-linked immunosorbent assay (ELISA).The method originated in the laboratory of Harry Towbin at the Friedrich Miescher Institute. The name western blot was given to the technique by W. Neal Burnette and is a play on the name Southern blot, a technique for DNA detection developed earlier by Edwin Southern. Detection of RNA is termed northern blot and was developed by George Stark at Stanford.
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