Download Unit 12 Introduction to Animal Evolution Notes

INTRODUCTION TO
ANIMAL EVOLUTION
Introduction
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Animal life began in Precambrian seas with the evolution of multicellular forms that
lived by eating other organisms.
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Early animals populated the seas, fresh waters, and eventually the land.
A. What is an animal?
1. Structure, nutrition and life history define animals
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While there are exceptions to nearly every criterion for distinguishing an animal from
other life forms, five criteria, when taken together, create a reasonable definition.
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(1) Animals are multicellular, heterotrophic eukaryotes.
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They must take in preformed organic molecules through ingestion, eating
other organisms or organic material that is decomposing.
(2) Animal cells lack cell walls that provide structural supports for plants and
fungi.
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The multicellular bodies of animals are held together with the extracellular
proteins, especially collagen.
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In addition, other structural proteins create several types of intercellular
junctions, including tight junctions, desmosomes, and gap junctions, that hold
tissues together.
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(3) Animals have two unique types of tissues: nervous tissue for impulse
conduction and muscle tissue for movement.
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(4) Most animals reproduce sexually, with the diploid stage usually dominating
the life cycle.
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In most species, a small flagellated sperm fertilizes a larger, nonmotile eggs.
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The zygote undergoes cleavage, a succession mitotic cell divisions, leading to
the formation of a multicellular, hollow ball of cells called the blastula.
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During gastrulation, part of the embryo folds inward, forming the blind
pouch characteristic of the gastrula.
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This produces two tissue layers: the endoderm as the inner layer and the
ectoderm as the outer layer.
Some animals develop directly through transient stages into adults, but others
have distinct larval stages.
•
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The larva is a sexually immature stage that is morphologically distinct from
the adult, usually eats different foods, and may live in a different habitat from
the adult.
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Animal larvae eventually undergo metamorphosis, transforming the animal
into an adult.
(5) The transformation of a zygote to an animal of specific form depends on the
controlled expression in the developing embryo of special regulatory genes called
Hox genes.

These genes regulate the expression of other genes.
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Many of these Hox genes contain common “modules” of DNA sequences,
called homeoboxes.
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Only animals possess genes that are both homeobox-containing in structure
and homeotic in function.
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All animals, from sponges to the most complex insects and vertebrates have
Hox genes, with the number of Hox genes correlated with the complexity of
the animal’s anatomy.
2. The animal kingdom probably evolved from a colonial, flagellated protist
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Most systematists now agree that the animal kingdom is monophyletic.
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If we could trace all the animals lineages back to their origin, they would
converge on a common ancestor.

That ancestor was most likely a colonial flagellated protist that lived over 700 million
years ago in the Precambrian era.
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This protist was probably related to choanoflagellates, a group that arose about a
billion years ago.

Modern choanoflagellates are tiny, stalked organisms inhabiting shallow ponds,
lakes, and marine environments.

One hypothesis for the origin of animals from a flagellated protist suggests that a
colony of identical cells evolved into a hollow sphere.
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The cells of this sphere then specialized, creating two or more layers of cells.
B. Two Views of Animal Diversity

Zoologists recognize about 35 phyla of animals.
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For the past century, there was broad consensus among systematists for the major
branches of the animal phylogenetic tree.
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This was based mainly on anatomical features in adults and certain details of
embryonic development.
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However, the molecular systematics of the past decade is challenging some of these
long-held ideas about the phylogenetic relationships among the animal phyla.
1. The remodeling of phylogenetic trees illustrates the process of scientific inquiry
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It must be frustrating that the phylogenetic trees in textbooks cannot be memorized as
fossilized truths.
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On the other hand, the current revolution in systematics is a healthy reminder that
science is both a process of inquiry and dynamic.
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Emerging technologies such as molecular biology and fresh approaches such as
cladistics produce new data or stimulate reconsideration of old data.

New hypotheses or refinements of old ones represent the latest versions of what we
understand about nature based on the best available evidence.
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Evidence is the key word because even our most cherished ideas in science are
probationary.
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Science is partly distinguished from other ways of knowing because its ideas can
be falsified through testing with experiments and observations.
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The more testing that a hypothesis withstands, the more credible it becomes.
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A comparison of the traditional phylogenetic tree of animals with the remodeled tree
based on molecular biology shows agreement on some issues and disagreement on
others.
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Though the new data from molecular systematics are compelling, the traditional view
of animal phylogeny still offers some important advantages for helping us understand
the diversity of animal body plans.
2. The traditional phylogenetic tree of animals is based mainly on grades in body
“plans”
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The traditional view of relationships among animal phyla is based mainly on key
characteristics of body plans and embryonic development.
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Each major branch represents a grade, which is defined by certain body-plan features
shared by the animals belonging to that branch.
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The major grades are distinguished by structural changes at four deep branches.
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1) The first branch point splits the Parazoa which lack true tissues from the
Eumetazoa which have true tissues.
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The parazoans, phylum Porifera or sponges, represent an early branch of the
animal kingdom.
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Sponges have unique development and a structural simplicity.
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2) The eumetazoans are divided into two major branches, partly based on body
symmetry.
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Members of the phylum Cnidaria (hydras, jellies, sea anemones and their
relatives) and phylum Ctenophora (comb jellies) have radial symmetry and are
known collectively as the radiata.
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The other major branch, the bilateria, has bilateral symmetry with a dorsal and
ventral side, an anterior and posterior end, and a left and right side.
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Linked with bilateral symmetry is cephalization, an evolutionary trend toward
the concentration of sensory equipment on the anterior end.
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The symmetry of an animal generally fits its lifestyle.
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Many radial animals are sessile or planktonic and need to meet the
environment equally well from all sides.
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Animals that move actively are bilateral, such that the head end is usually first
to encounter food, danger, and other stimuli.
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The basic organization of germ layers, concentric layers of embryonic tissue that
form various tissues and organs, differs between radiata and bilateria.
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The radiata are said to be diploblastic because they have two germ layers.
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Cephalization also includes the development of a central nervous system
concentrated in the head and extending toward the tail as a longitudinal nerve
cord.
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The ectoderm, covering the surface of the embryo, gives rise to the outer
covering and, in some phyla, the central nervous system.
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The endoderm, the innermost layer, lines the developing digestive tube, or
archenteron, and gives rise to the lining of the digestive tract and the organs
derived from it, such as the liver and lungs of vertebrates.
The bilateria are triploblastic.
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The third germ layer, the mesoderm lies between the endoderm and
ectoderm.
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The mesoderm develops into the muscles and most other organs between the
digestive tube and the outer covering of the animal.
3) The Bilateria can be divided by the presence or absence of a body cavity (a fluidfilled space separating the digestive tract from the outer body wall) and by the
structure the body cavity.
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Acoelomates (the phylum Platyhelminthes) have a solid body and lack a body
cavity.
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In some organisms, there is a body cavity, but it is not completely lined by
mesoderm.
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This is termed a pseudocoelom.
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These pseudocoelomates include the rotifers (phylum Rotifera) and the
roundworms (phylum Nematoda).
Coelomates are organisms with a true coelom, a fluid-filled body cavity
completely lined by mesoderm.
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The inner and outer layers of tissue that surround the cavity connect dorsally
and ventrally to form mesenteries, which suspend the internal organs.
A body cavity has many functions.
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Its fluid cushions the internal organs, helping to prevent internal injury.
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The noncompressible fluid of the body cavity can function as a hydrostatic
skeleton against which muscles can work.
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The presence of the cavity enables the internal organs to grow and move
independently of the outer body wall.
(4) The coelomate phyla are divided into two grades based on differences in their
development.
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The mollusks, annelids, arthropods, and several other phyla belong to the
protostomes, while echinoderms, chordates, and some other phyla belong to the
deuterostomes.
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These differences center on cleavage pattern, coelom formation, and blastopore
fate.
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Many protostomes undergo spiral cleavage, in which planes of cell division are
diagonal to the vertical axis of the embryo.
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Some protostomes also show determinate cleavage where the fate of each
embryonic cell is determined early in development.
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The zygotes of many deuterostomes undergo radial cleavage in which the
cleavage planes are parallel or perpendicular to the vertical egg axis.
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Most deuterostomes show indeterminate cleavage whereby each cell in the early
embryo retains the capacity to develop into a complete embryo.
Coelom formation begins in the gastrula stage.
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As the archenteron forms in a protostome, solid masses of mesoderm split to form
the coelomic cavities, called schizocoelous development.
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In deuterostomes, mesoderm buds off from the wall of the archenteron and
hollows to become the coelomic cavities, called enterocoelous development.
The third difference centers on the fate of the blastopore, the opening of the
archenteron.
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In many protosomes, the blastopore develops into the mouth and a second
opening at the opposite end of the gastrula develops into the anus.
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In deuterostomes, the blastopore usually develops into the anus and the mouth is
derived from the secondary opening.
3. Molecular systematists are moving some branches around on the phylogenetic
tree of animals
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Modern phylogenetic systematics is based on the identification of monophyletic
clades.
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Clades are defined by shared-derived features unique to those taxa and their
common ancestor.
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This creates a phylogenetic tree that is a hierarchy of clades nested within larger
clades.
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The traditional phylogenetic tree of animals is based on the assumption that grades in
body plan are good indicators of clades.
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Molecular systematics has added a new set of shared-derived characters in the form
of unique monomer sequences within certain genes and their products.
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These molecular data can be used to identify the clusters of monophyletic taxa
that make up clades.
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In some cases, the clades determined from molecular data reinforce the traditional
animal tree based on comparative anatomy and development, but in other cases, a
very different pattern emerges.
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This phylogenetic tree is based on nucleotide sequences from the small subunit
ribosomal RNA.
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At key places, these two views of animal phylogeny are alike.
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First, both analyses support the traditional hypotheses of the Parazoa-Eumetazoa
and Radiata-Bilateria dichotomies.
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Second, the molecular analysis reinforces the hypothesis that the deuterostomes
(echinoderms and chordates) form a clade.
However, the traditional and molecular-based phylogenetic trees clash, especially on
the protostome branch.
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The molecular evidence supports two protostome clades: Lophotrochozoa, which
includes annelids (segmented worms) and mollusks (including clams and snails),
and Ecdysozoa, which includes the arthropods.
Traditional analyses have produced two competing hypotheses for the relationships
among annelids, mollusks, and arthropods.
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Some zoologists favored an annelid-arthropod lineage, in part because both have
segmented bodies.
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Other zoologists argued that certain features favored an annelid-mollusk lineage,
especially because they share a similar larval stage, the trochophore larva.
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This hypothesis is supported by the molecular data.
Traditionally, the acoleomate phylum Platyhelminthes (flatworms) branches from the
tree before the formation of body cavities.
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The molecular data places the flatworms within the lophotrochozoan clade.
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If this is correct, then flatworms are not primitive “pre-coelomates” but are
protostomes that have lost the coelom during their evolution.
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The molecular-based phylogeny splits the pseudoceolomates with the phylum
Rotifera (rotifers) clustered with the lophotrochozoan phyla and the phylum
Nematoda (nematodes) with the ecdysozoans.
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The name Ecdysozoa (nematodes, arthropods, and other phyla) refers to animals that
secrete external skeletons (exoskeleton).
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As the animal grows, it molts the old exoskeleton and secretes a new, larger one, a
process called ecdysis.
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While named for this process, the clade is actually defined mainly by molecular
evidence.
In the traditional tree, the assignment of the three lophophorate phyla is problematic.
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These animals have a lophophore, a horseshoe-shaped crown of ciliated tentacles
used for feeding.
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The lophophorate phyla share some characteristics with protostomes and other
features with deuterostomes.
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The molecular data place the lophophorate phyla among the phyla with the
trochophore larvae, hence the name lophotrochozoans.
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In summary, the molecular evidence recognizes two distinct clades within the
protostomes and distributes the acoelomates, pseudocoelomates, and lophophorate
phyla among these two clades.
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Our survey of animal phyla is based on the newer molecular phylogeny, but there are
two caveats.
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First, the concept of body-plan grades is still a very useful way to think about the
diversity of animal forms that have evolved.
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Second, the molecular phylogeny is a hypothesis about the history of life, and is thus
tentative.
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This phylogeny is based on just a few genes - mainly the small subunit ribosomal
RNA (SSU-rRNA).
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Ideally, future research, including fossil evidence and traditional approaches, will
eventually square the molecular data with data from these other approaches.
C. The Origins of Animal Diversity
1. Most animal phyla originated in a relatively brief span of geologic time
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The fossil record and molecular studies concur that the diversification that produced
most animal phyla occurred rapidly on the vast scale of geologic time.
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This lasted about 40 million years (about 565 to 525 million years ago) during the
late Precambrian and early Cambrian (which began about 543 million years ago).
The strongest evidence for the initial appearance of multicellular animals is found in
the last period of the Precambrian era, the Ediacaran period.
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Fossils from the Ediacara Hills of Australia (565 to 543 million years ago) and
other sites around the world consist primarily of cnidarians, but soft-bodied
mollusks were also present, and numerous fossilized burrows and tracks indicate
the presence of worms.
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Recently, fossilized animal embryos in China from 570 million years ago and
what could be fossilized burrows from rocks 1.1 billion years ago have been
reported.
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Data from molecular systematics suggest an animal origin about a billion years
ago.
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Nearly all the major animal body plans appear in Cambrian rocks from 543 to 525
million years ago.
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During this relatively short time, a burst of animal origins, the Cambrian explosion,
left a rich fossil assemblage.
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It includes the first animals with hard, mineralized skeletons.
Some Cambrian fossils in the Burgess Shale in British Columbia and other sites in
Greenland and China are rather bizarre-looking when compared to typical marine
animals today.
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Some of these may represent extinct “experiments” in animal diversity.
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However, most of the Cambrian fossils are simply ancient variations of phyla that
are still represented in the modern fauna.
On the scale of geologic time, animals diversified so rapidly that it is difficult from
the fossil record to sort out the sequence of branching in animal phylogeny.
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Because of this, systematists depend largely on clues from comparative anatomy,
embryology, developmental genetics, and molecular systematists of extant
species.
2. “Evo-devo” may clarify our understanding of the Cambrian diversification
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There are three main hypotheses for what caused the diversification of animals.
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(1) Ecological Causes: The emergence of predator-prey relationships led to a
diversity of evolutionary adaptations, such as various kinds of protective shells
and diverse modes of locomotion.
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(2) Geological Causes: Atmospheric oxygen may have finally reached high
enough concentrations to support more active metabolism.
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(3) Genetic causes: Much of the diversity in body form among animal phyla is
associated with variations in the spatial and temporal expression of Hox genes
within the embryo.
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A reasonable hypothesis is that the diversification of animals was associated
with the evolution of the Hox regulatory genes, which led to variation in
morphology during development.
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Biologists investigating “evo-devo,” the new synthesis of evolutionary biology and
developmental biology, may provide insights into the Cambrian explosion.
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These three hypotheses are not mutually exclusive.
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Some systematists studying animal phylogeny interpret the molecular data as
supporting three Cambrian explosions, not just one.
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For the three main branches of bilateral animals—Lophotrochozoa, Ecdysozoa, and
Deuterostomia—the relationships among phyla within each are difficult to resolve,
but the differences between these three clades are clear, based on their nucleic acid
sequences.
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This suggests that these three clades branched apart very early, probably in the
Precambrian, perhaps associated with the evolution of the Hox complex.
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Rapid diversification within each clade may have been driven by geological
and/or ecological changes during the early Cambrian.
By the end of the Cambrian radiation, the animal phyla were locked into
developmental patterns that constrained evolution enough that no additional phyla
evolved after that period.
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Variations in developmental patterns continued, allowing subtle changes in body
structures and functions, leading to speciation and the origin of taxa below the
phylum level.
In the last half-billion years, animal evolution has mainly generated new variations on
old “designs”.