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Name ______________________
Date __________ Per. ________
RNA Structure, tRNA, and Protein Building
RNA is produced in the nucleus of a cell and moves out of the nucleus to the cell’s
ribosomes. This RNA is a specific sequence of bases copied from the DNA, which carries
the chromosomal genetic message to the cytoplasm. Thus, it is called messenger RNA
(mRNA). At the ribosomes, mRNA directs the building of proteins. Proteins are made up
of smaller molecules called amino acids. How does a cell construct the proper amino
acids into protein molecules? The mRNA takes the message to the site of protein
synthesis or the ribosome that is located in the cytoplasm of the cell. Ribosomes are two
part units that are made of protein and a form of RNA called ribosomal RNA (rRNA).
The mRNA attaches between the two halves of the ribosome. Formation of proteins
involves another kind of RNA, it is called transfer RNA (tRNA). The tRNA brings
specific amino acids (the building blocks of proteins) to mRNA according to the code
sequence of bases found on mRNA and they are joined by peptide bonds to form
proteins.
In this investigation you will:
 use paper models to show how base shapes in mRNA match only with specific base
shapes of DNA
 use paper models to show how base shapes in mRNA match only with specific base
shapes of tRNA
 use paper models to show how tRNA molecules bring specific amino acid molecules
to the ribosome where building of proteins occurs.
 Learn to transcribe a DNA code to a mRNA message and translate the mRNA to the
tRNA-amino acid code
 Study the molecular basis for mutations
Part A RNA Structure
Besides ensuring the exact replication of chromosomes, the sequence (order) and pairings
of bases are genetic code of the instructions for the entire cell. How does a cell read the
chemical message coded in its DNA in the form of specific base sequences? Part of the
answer lies with a second molecule in the nucleus of cells called ribonucleic acid (RNA).
RNA is similar to DNA in that its molecules are also formed from nucleotides. However
deoxyribose and thymine are not found in RNA. Two other molecules, ribose and uracil,
are present. Ribose replaces deoxyribose, and uracil replaces thymine.
1. Which base is replaced in RNA by uracil? __________________________________
2. What chemical replaces deoxyribose in RNA? _______________________________
3. To which base in DNA do the following RNA bases pair?
Guanine to __________________
Adenine to __________________
Cytosine to ____________________
Uracil to ____________________
RNA is a single-stranded (or ½ ladder) molecule. Thus, the series of RNA nucleotides
formed from DNA represents an RNA molecule. After its formation, this RNA leaves the
nucleus of the cell and goes to the ribosomes. It carries the DNA message of base
sequences in the exact same order. Therefore, the formation of this series of RNA
nucleotides is called TRANSCRIPTION.
Part B RNA Transcription
Cut out the six RNA nucleotide models. (Cut only along solid lines)
Match the six RNA nucleotides to the left side of the glued DNA molecule.
Remove the RNA nucleotide series from the DNA pattern.
(DNA molecules “unzip” temporarily during RNA production.)
Place the mRNA model in the cytoplasm and glue it to your paper
1. Do the mRNA half-rung bases pair exactly as they would if this were DNA
replication?
______________________________________________________________
Copy the following table and use check marks to indicate to which molecule each
characteristic applies.
DNA
2. Deoxyribonucleic acid
3. Ribonucleic acid
4. Ribose present
5. Deoxyribose present
6. Phosphoric acid present
7. Adenine present
8. Thymine present
9. Uracil present
10. Guanine present
11. Cytosine present
12. Formed from nucleotides
13. Double stranded
14. Single stranded
15. Remains in the nucleus
16. Moves out of the nucleus
17. Contains a chemical message or code
RNA
Part B Structure of tRNA
Recall that molecules of mRNA leave the cell nucleus and move out to the cell’s
ribosomes. Meanwhile, transfer RNA (tRNA) is present in the cell cytoplasm. Models of
mRNA are composed of many base nucleotides. However, tRNA has a three base
sequence (triplet) called an anticodon that can match up with the bases of mRNA (the
three bases in the mRNA are called codons).
Cut out the two models of tRNA. Cut only along solid lines.
4. Name the four nucleotide bases present in tRNA?
____________________________
5. Do these bases differ from those found in mRNA?
____________________________
6. How does the tRNA molecule differ from mRNA in shape?
______________________________________________
Join the tRNA molecules to the model of mRNA.
7.
a.
b.
c.
What base in mRNA can only join with the
adenine base of tRNA? ___________________
uracil base of tRNA? _____________________
guanine base of tRNA ____________________
8.
a.
b.
c.
d.
What order of bases on mRNA will match a sequence on tRNA of
UUA (uracil, uracil, adenine) ? ________________________________________
UCA (uracil, cytosine, adenine)? ______________________________________
UGA (uracil, guanine, adenine)? ______________________________________
AAA (adenine, adenine, adenine)? _____________________________________
Transfer RNA (tRNA) picks up amino acids in a series of chemical steps. A tRNA
molecule only picks up a certain amino acid. The amino acid is attached to the tRNA at
the end opposite the three bases that will attach to mRNA.
Cut out the two remaining models of amino acids, serine and aspartic acid, from the page
provided. Join these models to their proper tRNA models. Only specific amino acid will
fit along the top of each tRNA model. Remember that each tRNA model has a three
sequence base (triplet) called an anticodon.
9. What amino acid connects to a tRNA molecule with a triplet of (look at model)
a. AGC? ___________________________________________
b. CUG ___________________________________________
10. How many base molecules or nucleotides of mRNA are responsible for the coding
of one amino acid?
__________________________________________________________
Part C Forming a Protein Molecule During Translation
When many amino acid molecules are brought to the mRNA by tRNA, the amino acids
join to form a protein molecule. When tRNA molecules with their attached amino acids
join to the bases of the mRNA, the formation of a protein molecule is begun. This entire
process is called translation. The DNA message has been translated into a protein
molecule.Depending on the type and order of amino acids, an almost endless variety of
proteins can be produced. Because of the repeated matching of base sequences, the base
sequence in the DNA of chromosomes codes for and controls the formation of protein
molecules at ribosomes.
11. A ribosome receives the following mRNA message: AAA – CGA – GAA – GUU.
What will the sequence of tRNA bases joining to the mRNA molecule be?
_____________________________________________________________________
ANALYSIS
1. What is the function of mRNA?
_____________________________________________________________________
___________________________________________________________________
2. What is the function of tRNA?
________________________________________________________________________
________________________________________________________________________
3. How do tRNA and mRNA differ in their location within the cell?
________________________________________________________________________
________________________________________________________________________
4. Briefly describe translation.
________________________________________________________________________
________________________________________________________________________
5. What is being translated? _________________________________________________
Copy the chart by using check marks to indicate to which molecule each characteristic
applies.
Similarities and Differences Between mRNA and tRNA
MRNA
tRNA
Deoxyribose present
Ribose present
Phosphoric acid present
Adenine present
Thymine present
Uracil present
Guanine present
Cytosine present
Contains a chemical message or code
Carries an amino acid to a ribosome