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Gene Expression AS 90715 (3.3) external (for Michael) US 8931 Describing Gene expression. US 8932 Gene - Gene Interactions. Concepts to cover • • • • • • • • • The role of DNA in gene expression. DNA Replication Protein synthesis Hereditary metabolic disorders Allele Interactions Gene gene interactions Gene Environment interactions Mutations Control of gene expression (feedback mechanisms) The basic unit of living organisms is the cell The Genetic Code • Cell Structure • Prokaryotic cells – simple single cell bacteria, Chromatin material (DNA) not in nucleus, easier to study. • Eukaryotic cells – all cells with a true nucleus. Chromosomes in nucleus. • www.cellsalive.com to learn about organelles. Control the Cell • Proteins are responsible for – The enzymes that catalyse all the reactions – The structural parts (hair, muscle) – The carriers of oxygen (haemoglobin) – The fighters of disease (white blood cells) – Part of cell membranes (control movement in/out of cell) – hormones What controls the proteins, controls the cell. • The proteins organise every activity in the cell, so if you want to make a cell do or be something, you need to manage whatever it is that controls the proteins. • The genes in the chromosomes control the proteins. Every cell has the same genes but only the genes for the proteins being used by the cell are turned on in that cell. • Connect genes to proteins –use Agresearch DNA presentation. What is DNA.exe Eukaryotic Chromosome Structure • Refer to Manual pg 60 (old book) • Chromatin fibres, centromere. • Each chromosome not usually visible (is unwound so genes can be read during normal cell activity) • One chromatid, forms two chromatids (during cell division) • Coil of chromatin wrapped around histones. • DNA double helix. One double stranded DNA molecule DNA wrapped around a ball of histone proteins A chromosome is highly packaged DNA Karyotypes • Prepared photographs of chromosomes, used to identify pairs of chromosomes. • Human chromosomes in the nucleus are not normally visible in these shapes. • Manual pg 62 (old ) Homologous Chromosomes • Scientists worked out that chromosomes come in pairs, • The pair has the same genes on them, • So you get two versions of each gene, one on the chromosome from the mother and one on the chromosome from the father. • The genes are on matching locations on the pair of chromosomes so they are called Homo (same ) logous (location) chromosomes. • One breakthrough scientists made was to work out that one pair of chromosomes control the gender (the sex), • so that pair was called the sex chromosomes (XX and XY) • The other 22 pairs are called the autosomal chromosomes. The sex chromosomes are not homologous. Chromosomes and DNA • What do we know about DNA? Deoxyribonucleic acid • Nucleotide A phosphate A sugar (deoxyribose) A base • Adenine, Thymine • Cytosine, Guanine • Base Pairs match across DNA strands to make a double helix. (purines pair with pyrimidines) • Kb stands for kilobases – thousands of bases to make one gene on a chromosome. Other nucleic acids • Nucleic acids are a family that have the same structure – a phosphate, sugar and bases. • • • • • RNA has ribose instead of deoxyribose sugar Single strand (not double) No T, has Uracil (U) instead. Comes in mRNA, tRNA. • DNA comes in mitochondrial DNA as well. Double stranded DNA • One strand of the DNA is called the template strand (the one the mRNA reads to get the code). • The other strand is called the coding strand ( in fact it is identical to the mRNA in the end). • Manual pg 68, 69.Nucleic acids • Manual pg 76 Creating a DNA model DNA exon coding region intron non coding region In the exons and introns are rows and rows of matched up nucleotides. Scientists currently working out the order of the bases to break the genome to identify what the DNA is doing. • Look at a genome for a bacterial virus. • Manual pg 70. • The genome is only one side of the DNA double helix bases listed. NOW THAT WE KNOW HOW DNA IS SHAPED WHAT DOES IT DO? It does two things 1 Protein synthesis (makes proteins so the cell functions) 2 DNA replication (makes more chromosomes when the cell is dividing)