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Tackle the Science TAKS Why study this? •You have slept a few hundred times since you took biology. •We believe that you need an intensive review. Why are you here? TAKS Test Information 30% Nature of Science Graphs, Scientific Method, & Safety 15% Living systems Cells, Genetics, & Taxonomy 15% Environment Cycles, Pyramids, Chains, & Webs 20% Properties of Mater Atoms, Molecules, & Elements 20% Physics Motion, Forces, & Energy Nature of Science? a.k.a. “Can You Look at Pictures and Read a Graph?” age of population (millions) 100 total # 80 60 Series1 40 Which graph is better at showing the information? 20 10 0's 90 's 80 's 70 's 60 's 50 's 40 's 30 's 20 's ns te e 0 -1 0 0 decades What’s on the “X” axis? age of population (millions) 0 - 10 teens 20's 30's 40's 50's 60's What is it telling you? 70's 80's 90's 100's 1. Many doctors recommend 800 μg of folate, 400 μg of vitamin B12, and 50 mg of vitamin B6 per day to improve cardiovascular health. Based on this information and the nutrition label, the cardiovascular health benefit of a 1-ounce serving of this cereal is — ? A doubtful because it provides insufficient folate and vitamin B6 and lacks vitamin B12 B superb because it contains only 22 g of carbohydrates and 75 mg of sodium C excellent because it provides all needed vitamins and is low in fat and cholesterol D poor because it raises blood cholesterol levels with its high fat and cholesterol content Hint: Does the question talk about carbohydrates, fats and sodium? – ELIMINATE!! Scientific Method Steps: 1. Questions: 2. State a Hypothesis: “I think”, “If…, Then…”, “Cause and Effect” 3. Test or Experiment: How you know if your right, or wrong? 4. Collect Data: All experiments provide data. 5. Conclusion: Validate, or restate Cell and Cell Structures Cells are: smallest biological unit that can sustain life. Two different types of Cells Prokaryotes pronounced (pro-carry-oats) Pro = before Karyo = kernel or seed “Before the Nucleus” Prokaryotic cells are one where the genetic material is not contained in a nucleus. The DNA is just floating in the cell in a ring called a Plasmid. Best Example – E-coli bacteria in your gut EuKaryotes pronounced (you-carry-oats) Eu = true Karyo = kernel or seed “True Nucleus” Eukaryotes have genetic material stored in the nucleus. They are: •generally bigger •have organelles •may live in multi-cellular units Best example - You Diffusion: Things moving from high concentration to low concentration. Things will diffuse until they reach Equilibrium Osmosis: Water moving across a membrane to equalize another molecule’s concentration. Example: A substance (solute) is placed in a beaker that is divided by a semipermeable membrane. When a molecule can’t move across a membrane to equalize concentration, Water will! Water will move to equalize the concentration. DNA = DeoxyriboNucleic Acid What is it made from? Nucleotides: Phosphate group Ribose (5 carbon) sugar Nitrogen Base Groups of Nucleotides Purines Adenine Guanine Pyrimidines A G T C Thymine Cytosine Pairing Rule 1. Adenine always bonds with Thymine 2. Guanine always bonds with Cytosine How do they link up? One Nucleotide links with the next one in the chain by a COVALENT bond between the ribose and the next nucleotides phosphate The opposite side goes in the other direction, linking across the nitrogen base by HYDROGEN bonds How do cells make new copies of DNA for new cells? Replication: 1. When DNA needs to be copied, it unwinds in the nucleus 2. An enzyme, DNA Helicase, starts to “unzip” the DNA making a replication fork. 3. As DNA is unzipped, another enzyme, DNA Polymerase, begins to add nucleotides to the now exposed bases of the old strand. 4. The two new DNA strands recoil. DNA making DNA DNA makes RNA,…….. But How? Transcription: DNA making RNA 1. DNA unwinds and unzips. 2. The RNA Polymerase attaches to a Initiation site. 3. The RNA Polymerase begins to move only on one (1) of the strands adding RNA nucleotides 4. When reaching a termination site, the RNA Polymerase releases the DNA and goes to make more RNA Transcription occurs in the nucleus, but the Messenger RNA (mRNA) leaves the nucleus. It attaches to a Ribosome which begins to read the mRNA It reads three (3) letter words called Codons Example: An mRNA that attaches to the Ribosome A c u a a a g c g u a u g c a It reads ACU, then it moves down and reads AAA and so on… The process of reading the mRNA code and making Proteins is called: Translation The Ribosome doesn’t just read the mRNA, it calls for Amino Acids for each Codon it reads. The codon “U G C” calls for the amino Acid Cysteine. U G C Hey! I need a Cysteine!! A little help here? Help comes from another type of RNA: tRNA U G C A C G Transfer RNAs have a group of three bases called the “anticodon” that is the compliment of the mRNA Each TRNA carries a different Amino Acid: ACG carries Cysteine Cysteine The Ribosome moves down the mRNA and calls for the next Amino Acid The first tRNA goes away when the second amino acid is attached to the first with a Peptide bond Then the ribosome moves to the next Codon U G C A C G Cysteine A U C G G C Threonine Cell Division Cells divide for two reasons. 1. To create copies Mitosis 2. To create sex cells - Meiosis Mitosis 4 stages: 1. Prophase: The Centrioles begin to move apart. Chromosomes thicken The Nuclear membrane disappears 2. Metaphase: The centrioles are at the “poles” of the cell The chromosomes line up in the middle of the nucleus 3. Anaphase: The Chromosomes are pulled toward the centrioles by spindle fibers 4. Telophase: The nucleus begins to reform and the cell begins cytokinesis Meiosis: The process of creating haploid sex cells called Gametes Gamete - sperm or egg Has two “phases” of “Mitosis-like stages” For humans, it takes a cell with 46 chromosomes and makes cells with 23. Let’s look at some Genetic traits DOMINANT Black color This dog’s genetics could be two ways We show the genetics like this: “B” from one parent, “B” from the other parent OR “B” from one parent, “b” from the other parent “BB” is Homozygous for the trait. “Bb” is Heterozygous for the trait. Recessive lighter color This dog’s genetics CAN ONLY be shown one way: “b” from one parent, “b” from the other parent Recessive traits are ALWAYS homozygous; thus it would be “bb” OK, now for a problem: If I have a heterozygous black male and a golden femalewhat that ismate, the chances of having golden Bb puppies in the litter? 50% black X bb 100% golden 50% golden You either multiply it out or make a Punnett square Or b b B Bb Bb b bb bb 50% EVOLUTION Darwin’s Theory - Natural Selection Those organisms that are best “fit” to the environment will survive the environment. Adaptation – a characteristic that an organism has that allows it to survive. Extinction – all members of a population dying out due to not having beneficial adaptations. What Evidence is there for Natural selection? 1. The Fossil Record Fossils found at lower layers of rock are more simple than those found at upper layers. 2. Homologous Structures. Structures from one creature are similar to the structures from other creatures. 3. Vestigial Organs Organs that are found in you that have no purpose in the body, but are found and used in other organisms. 1. You have an appendix. 2. Snakes have hipbones. 3. Whales have hipbones too. 4. Missing Links There are missing links in the fossil record that show that the species that are in the earth today. Rhodocetus – Whale-like species with limbs. Archaeopteryx – ancient bird-like reptile with wings, and feathers. But it has teeth and claws on the forelimbs. Sometimes change is directional Directional Selection: This happens when one of the “extremes” is favored in an environment over the other extreme or the old average. Stabilizing Selection: Then the average is favored over either of the extremes in a population. Disruptive Selection: This situation happens when either extreme is favored over the average. Virus and Bacteria Virus: Non-living Parasitic Biological Particle Viruses do not “live” because they can not reproduce outside a “host” cell. Host: - any organism that is used by a virus or bacteria to complete it’s lifecycle Bacteria!!!! Prokaryotic cells Living cells! Bacteria come in three shapes. Spirilla – corkscrew shaped Bacilli – rod shaped Cocci - spherical shaped Classification Carolus Linnaeus created a system that allowed scientist all over the world to name the species that were discovered Kingdom – broadest classification King Phylum – separates into major groups within the Kingdom (plural – phyla) Phillip Class – breaks phyla into smaller groups Came Order – more specific Family – very similar characteristics Genus – a reproductive grouping Species – most specific Over For Good Soup How are animals put into the taxonomic categories? They used to be put in by looks (physical Characteristics). That can cause problems! Black Bear Panda (not bear) Phylogeny - the study of evolutionary relationships Cladogram - a way to visually show relationships between organisms. Two examples Now organisms are organized by similarities in their DNA. Types of Kingdoms 1. Animalia - heterotrophic multi-cellular no cell walls (there are 6 different kingdoms) 2. Plantae -Autotrophic multi-cellular with cell walls 3 Fungi - Heterotrophic multi-cellular with cell wall 4 Protista -Heterotrophic or autotrophic single cellular Eukaryotic with or without cell walls 5. Bacteria - heterotrophic or autotrophic single cellular prokaryotic with cell walls 6. Archaebacteria -Heterotrophic or autotrophic single cellular prokaryotic with cell walls live in extreme environments Ecology The study of interactions between living things and their environment Levels in Ecology 1. Individual A single member of a species 2. Population A group of individuals of a species. 3. Community Several species in an area. 4. Ecosystem Living and nonliving things in an area 5. Biome Group of ecosystems 6. Biosphere All the biomes How do organisms interact? Producers - organisms that produce their own energy, and are food for other organisms. They are also called autotrophs Consumers - organisms that have to eat other organisms for their energy They are also called heterotrophs Who eats who? Food Chain - a series of steps showing which organisms eat which. (transfer energy) Food Web - a chart linking all food webs in a particular area Another way to show relationships Ecological Pyramids Biomass Pyramid - each level in the pyramid shows the total amount of organisms in the level Numbers Pyramid - each level shows the numbers of individuals in the pyramid Energy Pyramid - each transition shows the amount of loss of energy from one level to the next. 90% of energy is lost to heat from one level to the next. Only 10% of your food is actually incorporated into making you! Cycles in Nature Water Cycle - shows the different stages that water goes through in ecology Carbon Cycle - the carbon that makes you and all other living (and many non living) things is shown moving through the environment. Nitrogen Cycle - All organisms require nitrogen. This cycle shows how it moves through the environment. Biotic factors in the environment interact in many ways Competition When groups are using limited resources Situation leaves winners and losers. Predation When one organism feeds on another They can form a symbiotic relationship (three different types) 1. Mutualism Both individuals benefit. 2. Commensalism One is helped, one is neither helped or harmed. 3. Parasitism One is helped, the other is harmed. Biomes: Def: a large area that is characterized by certain soil, climate. plants, and animals. Chemistry The Basics Matter – Anything that has mass and takes up space Substances – Cannot be broken down Physically Mixtures – physical combination of two or more substances Substances Compounds Elements • Cannot be broken • Chemical combination of two or more elements down any farther • Requires a chemical • Found on the Periodic reaction to separate Table IA A H II A Li Be Na VIII III B IV Al Si N 1s1 P 1s1 As 1s1 Sb 1s1 Bi O 1s1 Si 1s1 Se 1s1 Te 1s1 Po V Cr Mn Fe Co Ni Cu Zn Ga Ge Rb Sr Y Zr Nb Tc Ru Rh Pd Ag Cd In Sn Cs Ba La Hf Ta M o W Re Os Ir Pt Au Hg Tl Pb Rb Ra Ac Rf Db Sg Bh Hs Mt 5f1 5f2 5f3 5f4 4f5 5f5 4f6 5f6 I C Ti 4f4 VIII B K 4f3 VII VI M g Ca 4f2 VI V III II Sc 4f1 V IV 4f7 5f7 4f8 5f8 4f9 5f9 4f10 5f10 VII F 1s1 Cl Ne 1s1 Ar Br Kr I Xe At Rn 4f1 4f1 4f1 4f1 1 2 3 4 1 2 3 4 5f1 5f1 5f1 He 5f1 Mixtures Homogeneous • Uniformly mixed – Like soda Heterogeneous • Unevenly mixed – Like tossed salad Properties of matter Physical Chemical • Describes how • Describes how something looks or feels something acts (or reacts) • Observed using the senses • Observed through – Example: color, texture, chemical reactions – Examples: being • States of matter are flammable, iron will physical properties rust Physical Properties • • Intensive • Do not depend on how • much of something you have • • Examples: color, shape, density Extensive Does depend on how much you have Examples: mass, volume, Changes in Matter Physical Chemical • Any change that does not alter the • chemical make up of a substance • Example: – Tearing paper • – Boiling water – Melting iron • There are three main states of matter: solid, liquid, gas – Changing from one state to another is a physical change does not change the substance Any change in matter that does alter the chemical composition of a substance Examples: – Burning wood – Vinegar and baking soda – Rusting iron The Atom • The atom is the smallest part of an element that still retains the properties of that element. • All atoms are made up of three subatomic particles – Protons • Positive charge • Located in nucleus • Mass of 1 – Neutrons • No charge • Located in nucleus • Mass of 1 – Electrons • Negative charge • Located in electron cloud surrounding nucleus • Mass of 0 The Atom • An element is defined by the number of PROTONS it has • Protons + Neutrons + Mass. • In a neutral atom, the number of protons and electrons is the same •Atoms of the same element can differ in the number of electrons or the number of neutrons Isotopes •Atoms of the same element with different numbers of neutrons are called isotopes. •In isotope notation (carbon-14) the number tells the total atomic mass. IONS •Atoms of the same element with different numbers of electrons are called ions •The charge of an ion is always written as a superscript (Na+1) •If an ion has a positive charge, then it has LOST electrons •If an ion has a negative charge, then it has GAINED electrons The Periodic Table IA A H II A Li Be B III IV V VI VII VIII I III IV V B C Al Si N 1s1 P 1s1 As 1s1 Sb 1s1 Bi II Na Mg K Ca Sc Ti V Cr Mn Fe Co Ni Cu Zn Ga Ge Rb Sr Y Zr Nb Mo Tc Ru Rh Pd Ag Cd In Sn Cs Ba La Hf Ta W Re Os Ir Pt Au Hg Tl Pb Rb Ra Ac Rf Db Sg Bh Hs Mt VIII VI O 1s1 Si 1s1 Se 1s1 Te 1s1 Po VII He F 1s1 Cl Ne 1s1 Ar Br Kr I Xe At Rn 4f1 4f2 4f3 4f4 4f5 4f6 4f7 4f8 4f9 4f10 4f11 4f12 4f13 4f14 5f1 5f2 5f3 5f4 5f5 5f6 5f7 5f8 5f9 5f10 5f11 5f12 5f13 5f14 The periodic table organizes the elements by their chemical properties and reactivity. The Periodic Table IA A H II A Li Be B III IV V VI VII VIII I III IV V B C Al Si N 1s1 P 1s1 As 1s1 Sb 1s1 Bi II Na Mg K Ca Sc Ti V Cr Mn Fe Co Ni Cu Zn Ga Ge Rb Sr Y Zr Nb Mo Tc Ru Rh Pd Ag Cd In Sn Cs Ba La Hf Ta W Re Os Ir Pt Au Hg Tl Pb Rb Ra Ac Rf Db Sg Bh Hs Mt VIII VI O 1s1 Si 1s1 Se 1s1 Te 1s1 Po VII He F 1s1 Cl Ne 1s1 Ar Br Kr I Xe At Rn 4f1 4f2 4f3 4f4 4f5 4f6 4f7 4f8 4f9 4f10 4f11 4f12 4f13 4f14 5f1 5f2 5f3 5f4 5f5 5f6 5f7 5f8 5f9 5f10 5f11 5f12 5f13 5f14 On this table, the colors show the groups (families). Elements in the same column have similar chemical properties. The Periodic Table IA A H II A Li Be B III IV V VI VII VIII I III IV V B C Al Si N 1s1 P 1s1 As 1s1 Sb 1s1 Bi II Na Mg K Ca Sc Ti V Cr Mn Fe Co Ni Cu Zn Ga Ge Rb Sr Y Zr Nb Mo Tc Ru Rh Pd Ag Cd In Sn Cs Ba La Hf Ta W Re Os Ir Pt Au Hg Tl Pb Rb Ra Ac Rf Db Sg Bh Hs Mt VIII VI O 1s1 Si 1s1 Se 1s1 Te 1s1 Po VII He F 1s1 Cl Ne 1s1 Ar Br Kr I Xe At Rn 4f1 4f2 4f3 4f4 4f5 4f6 4f7 4f8 4f9 4f10 4f11 4f12 4f13 4f14 5f1 5f2 5f3 5f4 5f5 5f6 5f7 5f8 5f9 5f10 5f11 5f12 5f13 5f14 All Elements to the LEFT of the stair step line (red line) are metals. Elements to the RIGHT are nonmetals. Elements that are touching the line are called metalloids or semi-metals The Periodic Table IA A H II A Li Be B III IV V VI VII VIII I III IV V B C Al Si N 1s1 P 1s1 As 1s1 Sb 1s1 Bi II Na Mg K Ca Sc Ti V Cr Mn Fe Co Ni Cu Zn Ga Ge Rb Sr Y Zr Nb Mo Tc Ru Rh Pd Ag Cd In Sn Cs Ba La Hf Ta W Re Os Ir Pt Au Hg Tl Pb Rb Ra Ac Rf Db Sg Bh Hs Mt VIII VI VII O 1s1 Si 1s1 Se 1s1 Te 1s1 Po He F 1s1 Cl Ne 1s1 Ar Br Kr I Xe At Rn 4f1 4f2 4f3 4f4 4f5 4f6 4f7 4f8 4f9 4f10 4f11 4f12 4f13 4f14 5f1 5f2 5f3 5f4 5f5 5f6 5f7 5f8 5f9 5f10 5f11 5f12 5f13 5f14 The groups are named as follows: Alkali metals Transition metals Halogens Alkaline-earth metals Inner-transition metals Noble gases Chemical Bonds A Chemical bond is the force that holds two atoms together Bonds form so that atoms can be stable. An atom is stable when it has eight valence (outside) electrons The noble gases have eight valence electrons and therefore do not react with other elements The Two types of chemical bond are: Ionic Bonds Covalent Bonds Ionic Bonds • Formed when one atoms gives up electrons and another one takes them • Called ionic because ions are formed • Form crystals in solid form • Have much higher melting and boiling points Example : NaCl……. Table salt Covalent Bonds • Formed when one atom shares it electron with another • The word “covalent” means “outsides together” • Generally do not form crystals • Have lower boiling and melting points Example: H2O ….. Water Chemical Reactions How do you know a chemical reaction has happened? 1.It gives off light (flames are a good sign) 2.It gives off or absorbs heat (again with the flames) 3.It changes colors (unexpectedly) 4.Produces a gas (usually observed as bubbles or fizz) 5.Produces a precipitate (a solid formed from two liquid reactants) What are the different types of chemical reactions? 1. Synthesis – only one product from more than one reactant 2. Decomposition – more than one product from only one reactant 3. Single replacement – an element replaces one element in the other reactant 4. Double replacement – The two compounds that react trade partners 5. Combustion – must have oxygen, usually gives off a large amount of heat Chemical Equations A chemical equation uses symbols and chemical formulas to represent what happens in a chemical reaction. They look like the following: 1 CaSO4 + 2 LiOH 1 Li2SO4 + 1 Ca(OH)2 Reactants Products Subscripts Coefficients