Survey
* Your assessment is very important for improving the workof artificial intelligence, which forms the content of this project
* Your assessment is very important for improving the workof artificial intelligence, which forms the content of this project
KARUTURI, R. Krishna Murthy Genome Institute of Singapore, Singapore City, Singapore Selected Scholarly Contributions [Data Provided by ] Deciphering transcription factor binding patterns from genome-wide high density ChIP-chip tiling array data Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 6053 LNBI, pp. 230-240, 2010. Differential co-expression framework to quantify goodness of biclusters and compare biclustering algorithms Algorithms for Molecular Biology, 5 (1), art. no. 23, 2010. Genome-wide estimation of firing efficiencies of origins of DNA replication from time-course copy number variation data BMC Bioinformatics, 11, art. no. 247, 2010. The role of post-transcriptional RNA processing and plasmid vector sequences on transient transgene expression in zebrafish Transgenic Research, 19 (2), pp. 299-304, 2010. An oestrogen-receptor-α-bound human chromatin interactome Nature, 462 (7269), pp. 58-64, 2009. Ablation of phosphoinositide-3-kinase class II alpha suppresses hepatoma cell proliferation Biochemical and Biophysical Research Communications, 387 (2), pp. 310-315, 2009. RCP is a human breast cancer-promoting gene with Ras-activating function Journal of Clinical Investigation, 119 (8), pp. 2171-2183, 2009. Modeling and visualizing heterogeneity of spatial patterns of protein-DNA interaction from high-density chromatin precipitation mapping data Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 5542, pp. 236-247, 2009. Zebrafish spotted-microarray for genome-wide expression profiling experiments: data acquisition and analysis. Methods in molecular biology (Clifton, N.J.), 546, pp. 197-226, 2009. CDKN1C (p57KIP2) is a direct target of EZH2 and suppressed by multiple epigenetic mechanisms in breast cancer cells PLoS ONE, 4 (4), art. no. e5011, 2009. Weighted top score pair method for gene selection and classification Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 5265 LNBI, pp. 323-333, 2008. REST regulates distinct transcriptional networks in embryonic and neural stem cells. PLoS biology, 6 (10), 2008. The core and accessory genomes of Burkholderia pseudomallei: Implications for human melioidosis PLoS Pathogens, 4 (10), art. no. e1000178, 2008. REST regulates distinct transcriptional networks in embryonic and neural stem cells PLoS Biology, 6 (10), art. no. e256, pp. 2205-2219, 2008. The core and accessory genomes of Burkholderia pseudomallei: implications for human melioidosis. PLoS pathogens, 4 (10), 2008. Stepped linear regression to accurately assess statistical significance in batch confounded differential expression analysis Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 4983 LNBI, pp. 481-491, 2008. Zebrafish whole-adult-organism chemogenomics for large-scale predictive and discovery chemical biology PLoS Genetics, 4 (7), art. no. e1000121, 2008. Zebrafish whole-adult-organism chemogenomics for large-scale predictive and discovery chemical biology. PLoS genetics, 4 (7), 2008. Global profiling of DNA replication timing and efficiency reveals that efficient replication/firing occurs late during S-phase in S. pombe. PloS one, 2 (1), 2007. Adaptive expression responses in the Pol-γ null strain of S. pombe depleted of mitochondrial genome BMC Genomics, 8, art. no. 323, 2007. Global profiling of DNA replication timing and efficiency reveals that efficient replication/firing occurs late during S-phase in S. pombe PLoS ONE, 2 (8), art. no. e722, 2007. Data-driven smoothness enhanced variance ratio test to unearth responsive genes in 0-time normalized timecourse microarray data Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 4463 LNBI, pp. 25-36, 2007. Modulation of cell cycle-specific gene expressions at the onset of S phase arrest contributes to the robust DNA replication checkpoint response in fission yeast Molecular Biology of the Cell, 18 (5), pp. 1756-1767, 2007. Pharmacologic disruption of polycomb-repressive complex 2-mediated gene repression selectively induces apoptosis in cancer cells Genes and Development, 21 (9), pp. 1050-1063, 2007.