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TORTORA • FUNKE • CASE Microbiology AN INTRODUCTION B.E Pruitt & Jane J. Stein Chapter 19, part B Disorders Associated with the Immune System Acquired Immunodeficiency Syndrome (AIDS) • 1981 In U.S., cluster of Pneumocystis and Kaposi's sarcoma in young homosexual men discovered. The men showed loss of immune function. • 1983 Discovery of virus causing loss of immune function. Acquired Immunodeficiency Syndrome (AIDS) Figure 19.12a The Origin of AIDS • Crossed the species barrier into humans in Africa between 1884 and 1924 • Patient who died in 1959 in Congo is the oldest known case • Spread in Africa as a result of urbanization • Spread worldwide through modern transportation and unsafe sexual practices • Norwegian sailor who died in 1976 is the first known case in Western world HIV HIV Infection Glycoprotein spike: gp120 gp41 transmembrane glycoprotein Envelope Reverse transcriptase enzyme Envelope RNA Core with protein coat Capsid Structure of HIV and infection of a CD4+ T cell. The gp120 glycoprotein spike on the membrane attaches to a receptor on the CD4+ cell. The gp41 transmembrane glycoprotein probably facilitates fusion by attaching to a proposed fusion receptor on the CD4+ cell. HIV Infection Capsid Reverse transcriptase DNA Virus Two identical + stands of RNA 1 Retrovirus penetrates host cell. Host cell DNA of one of the host cell’s chromosomes 5 Mature retrovirus leaves host cell, acquiring an envelope as it buds out. Reverse transcriptase Viral RNA Identical strands of RNA 2 Virion penetrates cell and its DNA is uncoated 4 Transcription of the Viral proteins RNA provirus may also occur, producing RNA for new retrovirus genomes and RNA that codes for the retrovirus capsid and envelope proteins. Provirus 3 The new viral DNA is tranported into the host cell’s nucleus and integrated as a provirus. The provirus may divide indefinitely with the host cell DNA. Figure 13.19 Figure 19.13.1 HIV structure and attachment to receptors on target T cell. CCR5 or CXCR4 coreceptor CD4 receptor gp41 gp120 CD4+ T cell Attachment. The gp120 spike attaches to a receptor and to a CCR5 or CXCR4 coreceptor on the cell. Figure 19.13.2 HIV structure and attachment to receptors on target T cell. Viral envelope Fusion. The gp41 participates in fusion of the HIV with the cell. Figure 19.13.3 HIV structure and attachment to receptors on target T cell. Envelope remains behind Entry. Following fusion with the cell, an entry pore is created. After entry, the viral envelope remains behind and the HIV uncoats, releasing the RNA core (see Figure 19.14b) for directing synthesis of the new viruses. Figure 19.14b Latent and active HIV infection in CD4+ T cells. Provirus Viral RNA mRNA Core with viral RNA Progeny HIV Envelope Virus beginning to bud from T cell (b) Active infection. The provirus is activated, allowing it to control the synthesis of new viruses, which bud from the host cell. Final assembly takes place at the cell membrane, taking up the viral envelope proteins as the virus buds from the cell. Figure 19.15b Latent and active HIV infection in macrophages and dendritic cells. Proviru s mRNA Viral RNA Core with viral RNA Activated macrophage. New viruses are produced from provirus. Completed virions are either released or persist in the macrophage within vacuoles. Figure 19.15a Latent and active HIV infection in macrophages and dendritic cells. Provirus Macrophage Chromosomal DNA Vacuole Insert Fig 19.15a HIV Latently infected macrophage. HIV can persist either as a provirus or as a complete virion in vacuoles. Clades (Subtypes) of HIV • HIV-1 • M (main) • B (North and South America, Europe) • C (India, eastern and southern Africa) • E (southeast Asia) • O (outlier) • N (non-M or non-O) The Stages of HIV Infection • Phase 1: asymptomatic or chronic lymphadenopathy • Phase 2: symptomatic; early indications of immune failure • Phase 3: AIDS indicator conditions Figure 19.16 The Progression of HIV Infection. Understanding how the HIV infection progresses in a host is integral to understanding the diagnosis, transmission, and prevention of this pandemic. Although there is no cure, see information below on drug treatments. Symptomatic; early Indications of immune failure AIDS indicator conditions 1200 12 1100 11 About 2 months following initial infection, the population of HIV in the blood peaks at about 10 million per ml. 1000 900 10 9 CD4+ cell population declines steadily. Huge but indefinite numbers of HIV, 8 Population of CD4+ many in latent or proviral form, are 7 T cells plunges during consistently present acute phase of HIV in lymphoid tissue. At least 100 billion 6 infection, then recovers as HIV are generated each Immune response appears. day for years, mostly by infected 5 T cells. + Clinical AIDS: CD4 Seroconversion: Detectable antibodies T cell population 4 against HIV appear. Immune response drops to 200 cells /μl.3 causes rapid decline in HIV population. 800 700 Insert Fig 19.16 600 500 400 300 200 2 HIV in blood stabilizes at steady rate of 1000 to 10,000 per ml. 100 3 6 mo mo 1 2 3 4 5 6 1 7 Years (for someone not receiving anti-HIV medication) CD4+ T cell population HIV population in blood 8 9 Blood plasma HIV/RNA (millions of copies/ml) CD4+ T cell blood concentration (cells/μl) Asymptomatic or chronic lymphadenopathy 10 HIV levels in blood rise as the immune system breaks down. HIV progresses as it destroys the T cells essential for the body’s defenses against infectious disease and cancer. AIDS is the final stage in this progressive infection. Some Common Diseases Associated with AIDS Table 19.5 Diagnostic Methods • Seroconversion takes up to 3 months • HIV antibodies detected by ELISA • HIV antigens detected by Western blotting • Plasma viral load is determined by PCR or nucleic acid hybridization HIV Transmission • HIV survives 6 hours outside a cell • HIV survives >1.5 days inside a cell • Infected body fluids transmit HIV via: • Sexual contact • Breast milk • Transplacental infection of fetus • Blood-contaminated needles • Organ transplants • Artificial insemination • Blood transfusion Modes of HIV Transmission Figure 19.17 Figure 14.4 Reported AIDS cases in the United States. 120,000 Second 250,000 cases First 250,000 cases Third 250,000 cases Fourth 250,000 Cases 100,000 Number of cases 80,000 Expansion of surveillance case definition 60,000 40,000 Insert Fig 14.4 20,000 0 1979 1983 1987 1991 1995 Year 1999 2003 2007 AIDS Worldwide • U.S., Canada, western Europe, Australia, northern Africa, South America • Injecting drug use, male-to-male sexual contact • Sub-Saharan Africa • Heterosexual contact • Eastern Europe, Middles East, Asia • Injecting drug use, heterosexual contact AIDS Worldwide EASTERN EUROPE & CENTRAL ASIA EAST ASIA* WESTERN EUROPE NORTH AMERICA 1.5 million CARIBBEAN 240,000 LATIN AMERICA 1.4 million 770,000 820,000 SOUTH & NORTH AFRICA & SOUTHEAST ASIA* THE MIDDLE EAST 460,000 SUB-SAHARAN AFRICA Insert Fig 19.17 4.1 million AUSTRALIA, NEW ZEALAND & OCEANIA 1.4 million 57,000 22.5 million = 100,000 persons living with HIV/AIDS are that India now has *Estimates about 2.4 million cases; China is estimated to have less than 1 million cases. Figure 19.16 Prevention of AIDS • Use of condoms and sterile needles • Health-case workers use universal precautions • Wear gloves, gowns, masks, goggles • Do not recap needles • Risk of infection from infected needlestick injury is 0.3% Vaccines in Clinical • Whole-cell Salmonella with gp120 gene • Subunit vaccine using gp120 expressed in Saccharomyces • Canarypox virus with HIV capsid protein genes • Naked DNA consisting of tat (transcription factor) or gag (capsid protein) genes Chemotherapy • Reverse transcriptase inhibitors • Nucleoside reverse transcriptase inhibitors • Tenofovir and emtricitabrine • Non-nucleoside reverse transcriptase inhibitors • Efavirenz Chemotherapy • Protease inhibitors • Atazanavir, indinavir, and saquinavir • Cell entry inhibitors • Block fusion • Enfuvirtide and maraviroc • Integrase inhibitors • Enzyme to form HIV provirus • Raltegravir Figure 20.16a The structure and function of the antiviral drug acyclovir. Guanine Insert Fig 20.16a Deoxyguanosine Acyclovir Acyclovir structurally resembles the nucleoside deoxyguanosine Figure 20.16bc The structure and function of the antiviral drug acyclovir. Phosphate Nucleoside Normal thymidine kinase Guanine nucleotide DNA polymerase Incorporated into DNA The enzyme thymidine kinase combines phosphates with nucleosides to form nucleotides, which are then incorporated into DNA. Phosphate Thymidine kinase in virus-infected cell DNA polymerase blocked by false nucleotide. Assembly of DNA stops. Acyclovir (resembles nucleoside) False nucleotide (acyclovir triphosphate) Acyclovir has no effect on a cell not infected by a virus, that is, with normal thymidine kinase. In a virally infected cell, the thymidine kinase is altered and converts the acyclovir (which resembles the nucleoside deoxyguanosine) to a false nucleotide, which blocks DNA synthesis by DNA polymerase. HAART • Highly active antiretroviral therapy • Combinations of nucleoside reverse transcriptase inhibitors plus • Non-nucleoside reverse transcriptase inhibitor or • Protease inhibitor Highly Active Antiretroviral Therapy (HAART): Combinations of nucleoside reverse transcriptase inhibitors + Non-nucleoside reverse transcriptase inhibitor or Protease inhibitor Reverse transcriptase inhibitors Nucleoside reverse transcriptase inhibitors Tenofovir and emtricitabrine Non-nucleoside reverse transcriptase inhibitors Efavirenz