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Bioinformatic and Computational
research in Biological Sciences
Jason Bond
Les Goertzen
Rita Graze
Ken Halanych
Mark Liles
Scott Santos
Not just Dept. of Biological Science connections to several AU units and
national & international colleagues
Genomic Revolution
• Very large volumes of data
• Computationally expensive analyses
Genomic Revolution
Microbes to Vertebrates
Genomic Revolution
Phylogenomics
– Genomic computation
– Tree building
Bond 2014 Current Biology
Populations to species
to major lineages of life
Bioinformatics
Pipeline
Pleurobrachia
Genome
160Mb genome
600x coverage
Moroz et al. Nature 2014
Gene Networks & Interactions
Proteomics
This compound-protein-protein interaction
network shows the interactions of 1.160
compounds and 894 proteins.
Ecological
Analyses
Post Gulf oil spill analyses of small animal
communities. Brannock et al. 2014
Dream hires
• Jonathon Eisen, UC Davis
• Steven Salzberg, Johns Hopkins
• Brian Haas, Broad Institute
• Thomas Juenger, Univ. Texas
• Matthew Hahn, Indiana Univ.