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Topic 5.5 Linnaeus introduced a system of naming and classifying species in the 18th century. Linnaeus’s system assigns to each species a twopart latinized name, or binomial. The first part of a binomial is the genus to which a species belongs. The second part identifies one species within that genus. The two parts must be used together to name a species. For example, the scientific name for the domestic cat is Felis catus. ◦ Notice that the first letter of the genus name is capitalized and that the binomial is italicized and latinized. Linnaeus also grouped species into a hierarchy of categories. Beyond the grouping of species within genera, the Linnaean system extends to progressively broader categories of classification. It places similar genera in the same family, puts families into orders, orders into classes, classes into phyla, phyla into kingdoms, and kingdoms into domains. ◦ Did King Phillip Come Over From Great Spain? Taxonomy is the grouping of organism into more inclusive categories. ◦ Each taxonomic unit at any level—family Felidae or class Mammalia—is called a taxon. Phylogenetic trees are used to depict hypotheses about the evolutionary history of species. ◦ These branching diagrams reflect the hierarchical classification of groups nested within more inclusive groups. ◦ The “highest” or most inclusive taxon is at the bottom, and each branch point represents the divergence of two lineages from a common ancestor. Phylogenetic Tree Cladistics involves the identification of clades, evolutionary branches that consist of an ancestral species and all its descendants. Based on the Darwinian concept that evolution proceeds when a new heritable trait develops in an organism and is passed on to its descendants. Groups of organisms that share such a new, or derived, trait are more closely related to each other than to groups that have only the original set of traits. The new traits are called shared derived characters, while the original traits present in ancestral groups are called shared primitive characters. A cladogram is a diagram used to depict the pattern of shared characters. A dichotomous key is a tool that allows the user to determine the identity of items in the natural world, such as trees, wildflowers, mammals, reptiles, rocks, and fish. ◦ Keys consist of a series of choices that lead the user to the correct name of a given item. ◦ "Dichotomous" means "divided into two parts". ◦ Therefore, dichotomous keys always give two choices in each step. Dichotomous Key Nonvascular Plants: Approximately 475million years ago, plants originated from an aquatic green algal ancestor. ◦ Early diversification gave rise to what are called the bryophytes: liverworts, hornworts, and mosses. ◦ Bryophytes resemble other plants in having retained on the parent plant. ◦ Unlike other plants, however, bryophytes lack vascular tissue and are therefore called “nonvascular plants” ◦ Without strong cell walls of vascular tissue, bryophytes lack support. ◦ Thus, a mat of moss actually consists of many plants growing in a tight pack, holding one another up. ◦ The mat is spongy and retains water. ◦ The flagellated sperm of mosses and other bryophytes swim to the eggs, so fertilization requires the plant to be covered with a film of water. Hornwort Mosses Liverwort Vascular Plants ◦ Originated about 420 million years ago. ◦ Their lignin-hardened vascular tissues provide strong support, enabling stems to stand upright and grow tall on land. ◦ Two clades of vascular plants are informally called seedless vascular plants: Lycophytes (club mosses) and wide-spread pterophytes (ferns and their relatives) A fern has well-developed roots and rigid stems. In many species, the leaves, commonly called fronds, sprout from stems that grow along the ground. Ferns are common in temperate forests, but they are most diverse in tropics. Ferns have flagellated sperm that require a layer of water to reach the eggs, and they have spores enclosed in tough, protective walls. Club Mosses Ferns Vascular plants ◦ Vascular plants with seeds, seed plants, evolved about 360 million years ago. ◦ A seed consists of an embryo packaged with a food supply with a protective covering. ◦ Today, seed plants account for over 90% of the approximately 290,000 species of living plants. ◦ Several key adaptations underlie the enormous success of seed plants: Seeds are survival packets for life on land, contributing to the spread of plants to diverse habitats by allowing plant embryos to be dispersed more widely. Seeds do not require a water layer for fertilization. They produce pollen, which transfers sperm to egg producing parts of the plant. Pollen is carried passively by wind or animals. Vascular Plants ◦ Seed Plants: Gymnosperms and Angiosperms Gymnosperms are among the earliest seed plants. “naked” seed; seeds are said to be naked because they are not produced in specialized chambers. The largest clade of gymnosperms are the conifers, consisting mainly of cone-bearing trees, such as pine, spruce, and fir. Angiosperms are the flowering plants, which appeared at least 140 million years ago. Flowers are complex reproductive structures that develop seeds within protective chambers. The great majority of living plants—some 250,000 species– are angiosperms and include a wide variety of plants, such as grasses, flowering shrubs, and flowering trees. Angiosperm Gymnosperm Four key adaptations for life on land distinguish the main lineages of the plant kingdom: ◦ 1. Dependent embryos are present in all plants ◦ 2. Lignified vascular tissues mark a lineage that gave rise to most living plants. ◦ 3. Seeds are found in a lineage that includes all living gymnosperms and angiosperms and that dominates the plant kingdom today. ◦ 3. Flowers mark the angiosperm lineage. One way that biologist categorize the diversity of animals is by certain general features of body structure, which together describe what is referred to as an animal’s “body plan.” These distinctions are used to help infer the phylogenetic relationships between animal groups. Symmetry ◦ Radial symmetry For example, a sea anemone; the body parts radiate from the center. Any imaginary slice through the central axis divides a radially symmetrical animal into mirror images. Thus, the animal has a top and a bottom, but not right and left sides These animals are typically sedentary or passively drifting, meeting its environment equally on all sides. ◦ Bilateral symmetry For example, a lobster; has mirror-image right and left sides; a distinct head, or anterior, end; a tail, or posterior end; a back, or dorsal, surface; and a bottom, or ventral, surface. The brain, sense organs, and mouth are usually located in the head. These animals are usually active and travel headfirst through the environment, with their eyes and other sense organs contacting the environment first. Body plans also vary in the organization of tissues. ◦ True tissues are collections of specialized cells, usually isolated from other tissues by membrane layers, that perform specific functions. Some animals have no tissues (sponge); In some animals, cell layers formed during gastrulation give rise to true tissues and to organs: Some animals have only two layers, an ectoderm and endoderm; most animals have three layers, including a mesoderm. Body plans also vary in the organization of tissues. (continued…) ◦ Animals with three tissue layers may be characterized by the presence or absence of a body cavity. This fluid-filled space between the digestive tract and body wall cushions the internal organs and enables them to grow and move independently. In soft-bodied animals, a noncompressible fluid in the body cavity forms a hydrostatic skeleton that provides a rigid structure against which muscles contract, moving the animal. A roundworm has a body cavity called a pseudocoelom “False hollow”; not completely lined by tissue derived from mesoderm. A segmented worm has a body cavity called a true coelom, which is completely lined by tissue derived from mesoderm. Acoelomate (Flatworm) Pseudocoelemate (roundworm) Coelomate (Segmented worm) Animals with three tissue layers can be separated into two groups based on details of their embryonic development, ◦ Such as the fate of the opening formed during gastrulation that leads to the developing digestive tract. In protostomes, this opening becomes the mouth. In deuterostomes, this opening becomes the anus, and the mouth forms from a second opening. Other differences between protostomes and deutorostomes include the pattern of early cell divisions and the way the coelom forms. Phylum Porifera Stationary animals that are so sedentary that the ancient Greeks believed them to be plants. Majority of the species are marine, although some are found in freshwater. A simple sponge resembles a thick-walled sac perforated with holes. ◦ Water is drawn through the pores into a central cavity, then flows out through a larger opening. ◦ More complex sponges have branching water canals. They are suspension feeders, also known as filter feeders, animals that collect food particles from water passed through some type of food-trapping equipment. ◦ To obtain enough food to grow by 100 g (about 3 ounces), a sponge must filter 1,000 kg (about 275 gallons) of sea water. Adult sponges are sessile, meaning they are anchored in place; therefore they cannot escape from predators. ◦ Researchers have found that sponges produce defensive compounds such as toxins and antibiotics that deter pathogens, parasites, and predators. ◦ Some of these compounds may prove useful to humans as new drugs. ◦ Also, as sponges trap particles, they perform an important ecological service by purifying the water around them. They are the simplest of all animals. ◦ They have no nerves or muscles, though their individual cells can sense and react to changes in the environment. ◦ Since the cell layers are loose federations of cells, they are not considered true tissues. ◦ Biologist hypothesize that the sponge lineage arose very early from the multicellular organisms that gave rise to the animal kingdom. Bilateral symmetry Phylum Platyhelminthes Thin, simple, ribbonlike animals range in length from about 1 mm to 20 m and live in marine, freshwater, and damp terrestrial habitats. In addition to free-living forms, there are many parasitic species. Most flatworms have a gastrovascular cavity with one opening. The fine branches of the gastrovascular cavity distribute food throughout the animal. Three major groups of flatworms include: ◦ Planarians, or free-living flatworms ◦ Flukes, or parasitic flatworms ◦ Tapeworms, or parasitic flatworms Planaria Fluke Tapeworm Phylum Mollusca Snails, slugs, oysters, clams, octopuses, and squids Soft-bodied, protected with a hard shell. Basic body plan consists of three main parts: ◦ A muscular foot Functions in locomotion ◦ A visceral mass Containing most of the internal organs ◦ A mantle A fold of tissue that drapes over the visceral mass and secretes a shell in clams and snails. Also produces a water-filled chamber called the mantle cavity , which houses the gills. Most molluscs also have a unique rasping organ called a radula, which is used to scrape up food. Most molluscs have separate sexes, with reproductive organs located in the visceral mass. ◦ Have a ciliated larval stage called a trocophore. Have a true coelom and circulatory system—an organ system that pumps blood and distributes nutrients and oxygen throughout the body. Three diverse groups: ◦ Gastropods Including snails and slugs ◦ Bivalves Including clams, scallops, and oysters ◦ Cephalopods Including squid and octopuses Snail Clam Octopus Phylum Annelida Have segmentation, the subdivision of the body along its length into a series of repeated parts (segments), played a crucial role in the evolution of many complex animals. ◦ A segmented body allows for greater flexibility and mobility, and it probably evolved as an adaptation facilitating movement. ◦ An earthworm, a typical annelid, uses its flexible, segmented body to crawl and burrow rapidly into the soil. Annelids range in length from 1 mm to 3m, the length of some giant Australian earthworms. They are found in damp soil, in the sea, and in most freshwater habitats. Some aquatic annelids swim in pursuit of food, but most are bottom-dwelling scavengers that burrow in sand and mud. There are three main groups of annelids: ◦ Earthworms ◦ Polychaetes ◦ Leeches Earthworms and their relatives ◦ The coelom is partitioned by membrane walls. ◦ Many of the internal body structures are repeated within each segment ◦ The nervous system includes a simple brain and a ventral nerve cord with a cluster of nerve cells in each segment. ◦ The excretory organs which dispose of fluid waste, are also repeated in each segment. ◦ The digestive tract, is not segment; it passes through the segment walls from the mouth to the anus. ◦ Have a closed circulatory system, in which blood remains enclosed in vessels as it distributes nutrients and oxygen throughout the body. The pumping organ, or “heart” is simply an enlarged region of the dorsal blood vessel plus five pairs of segmental vessels near the anterior end “aortic arches” Earthworms and their relatives (continued)… ◦ Each segment is surrounded by longitudinal and circular muscles. They move by coordinating contraction of these two sets of muscles. These muscles work against the coelomic fluid in each segment. Each segment also has four pairs of stiff bristles that provide traction for burrowing. ◦ They are hermaphodites They have both male and female reproductive structures. They mate and cross-fertilize by exchanging sperm. A specialized thickened region of the worm, called the clitellum, secretes a cocoon made of mucus. The cocoon slides along the worm, picking up the eggs and the received sperm. The cocoon slips off the worm into the soil, where the embryos develop. Earthworms and their relatives (continued)… ◦ Earthworms eat their way through soil, extracting nutrients as soil passes through their digestive tube. ◦ Undigested material, mixed with mucus secreted into the digestive tract, is eliminated as feces though the anus. ◦ Farmers value earthworms because they aerate tehsoil and their feces improve the soil’s texture. Earthworm anatomy Earthworm Polychaetes ◦ Sandworm, which lives on the sea floor ◦ Each segment has a fleshy, paddle-like appendages with many stiff bristles that help the worm wriggle about in search of small invertebrates to eat. Leeches ◦ Notorious for their blood sucking habits. ◦ The majority inhabit fresh water, but there are also marine species and a few terrestrial ◦ Range in length from 1 to 30 cm. ◦ Use razor-like jaws to slit the skin of an animal. Host is usually oblivious to this attack because the leech secretes an aesthetic as well as an anticoagulant into the wound. Then the leech sucks as much blood as it can hold, often more than ten times its own weight. Polychaete Leech Phylum Arthropoda Includes crayfish, lobsters, crabs, barnacles, spiders, ticks, and insects 2/3 of all animals are arthropods; estimated 1018 individuals. Segmented, have a hard exoskeleton, and jointed appendages. The appendages are variously adapted for sensory reception, defense, feeding, walking, and swimming. The exoskeleton, which covers the body and appendages, is an external skeleton that protects the animal and provides points of attachment for the muscles that move the appendages. ◦ Nonliving covering, or cuticle, is constructed from layers of protein and chitin, a polysaccharide. ◦ Thick around the head, where its main function is to house and protect the brain. ◦ It is paper-thin and flexible in other locations, such as the joints of the legs. ◦ As it grows, an arthropod must periodically shed its old exoskeleton and secrete a larger one, a complex process called molting. Body of most arthropods is formed of several distinct groups of segments: the head, thorax, and abdomen. ◦ Head bears sensory antennae, eyes, and jointed mouthparts on the ventral side. ◦ The thorax bears a pair of defensive appendages (the pincers) and four pairs of legs for walking. ◦ The abdomen has swimming appendages. ◦ *in some arthropods, the head and thorax are partly fused into a region called the cephalothorax. Have an open circulatory system in which a tube-like heart pumps blood through short arteries into spaces surrounding the organs. Most species have gills. Arthropod groups: ◦ Chelicerates Includes horseshoe crabs, arachnids (scorpions, spiders, ticks, and mites) ◦ Millipedes and centipedes ◦ Crustaceans Lobsters and crayfish Horse shoe crab Spider Lobster