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Download ISSN-1916-5382 Title: Factors Regulating Cell Division in eukaryotic
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ISSN-1916-5382 Title: Factors Regulating Cell Division in eukaryotic cells Authors: Jigna G. Tank, Rohan V. Pandya and V. S. Thaker Affiliation: Centre for Advanced studies in Plant Biotechnology and Genetic Engineering (CPBGE), Department of Biosciences, Saurashtra University, Rajkot- 360005 Abstract Cell cycle is a key process in growth and development of living organisms. It is regulated at each and every step during growth. There are various factors responsible for regulating cell cycle for better development of an organism. These factors are regulated by biotic and abiotic environmental conditions. Biotic factors includes cell cycle checkpoints used during each cell cycle phases, Cyclin dependent kinases (CDKs) enzymes regulating the process of cell division and Cell cycle inhibitors. Abiotic factors includes in vivo regulators and in vitro regulators. In vivo regulators are nutrients, environmental factors and hormones. In vivo regulators includes various chemicals responsible for cell synchronization, natural products used as antimitotic agents and miscellaneous agents used for cell cycle inhiition Introduction Cell cycle is the process of formation of two daughter cells from parent cell. It is a key process in the formation of all living organisms. it is divided into two phases: 1 M phase: During M phase, cellular contents are partitioned between two daughter cells. It is composed of two tightly coupled processes: (a) mitosis, in which the cell’s chromosomes are divided between the daughter cells and (b) cytokinesis, in which the cell’s cytoplasm divides forming distinct cells. Interphase: After M phase, each daughter cell begins interphase of a new cycle. All stages of the interphase are not morphologically distinguishable. Interphase is formed of three stages G1 phase, S phase, and G2 phase. In G1 phase the cell grows; in S phase the nuclear genetic information is replicated and in G2 phase further growth of cell occurs in preparation for division. Each phase of cell cycle has a distinct set of specialized biochemical processes that prepare the cell for initiation of cell division. a) G1 phase: G1 phase starts with the end of M phase and ends with the beginning of DNA synthesis, indicating gap or growth. This phase is involved in synthesis of various enzymes that are required in S phase. The biosynthetic activities of the cell are resumed at a high rate during this phase, which has been considerably slowed down during M phase. Duration of G1 phase is highly variable.(Smith et al, 1973 ) b) S phase: it starts with DNA synthesis and completes when all of the chromosomes have been replicated. Although the Ploidy of the cell remains the same, the amount of DNA is double during this phase. Each chromosome has two sister chromatids. Except for the high histone production rate of protein synthesis and RNA transcription are very low in S phase. The duration of S phase is relatively constant. (Cameron et al, 1963 ). 2 c) G2 phase: After DNA replication, cell enters G2 phase. During this phase Protein synthesis occurs which involves production of microtubules, in turn required for mitosis. Inhibition of protein synthesis during G2 phase prevents the cell from undergoing mitosis. It lasts until the cell enters the next round of mitosis. d) G0 phase: cells that have temporarily stopped dividing are said to have entered a state of quiescence called G0 phase. Non-proliferative cells in multicellular eukaryotes generally enter the quiescent state from G1 and may remain quiescent for long period of time. This is very common for cells that are fully differentiated. Some non-proliferative cells remain quiescent indefinitely for example, neurons. While others such as epithelial cells, continue to divide throughout an organism’s life (Wikipedia free encyclopedia, 2007). Plant cells can be induced to begin dividing again under specific circumstances. They have ability to dedifferentiate and acquire pluripotency, a phenomenon known as totipotency, which is not found in animals. New organs in plants such as roots, stem, leaves and flowers originate from life-long iterative cell divisions followed by cell growth and differentiation. Such cell division occurs at specialized zones known as meristems. The shoot and floral meristem forms leaves and flowers whereas, the root meristems causes the growth of roots. The cells at the meristem are pluripotent, so that their progeny can acquire a spectrum of developmental fates. For example, initially the shoot apical meristem produces leaves under the right developmental or environmental condition; it gets converted into a floral meristem that produces flowers. The study of genetic, biochemical and molecular lines during the last decade has shown that four phases of cell division are regulated by many factors. Cell cycle regulators regulate all the phases of the cell cycle by regulatory pathways that communicates with environmental 3 constraints such as nutrient availability, signals such as growth factors or hormones and developmental cues which controls the cell division and determines when and in which cell, division will occur.(Doerner, 1994, Inze and De Veylder, 2006). Factors regulating cell cycle:Factors regulating cell cycle are divided into two main types: I. Abiotic factors II. Biotic factors Abiotic factors:Abiotic factors are divided into two types: I. In vivo regulators Nutrients and Environmental factors: Cell cycle is regulated by the restriction point which is present in late G1 phase. It controls progression of cell cycle from G1 to S transition. Once cell have passed restriction point, it is allowed to enter S phase and thus it undergoes one cell division cycle. However, passage through the restriction point is a highly regulated process. It is controlled by external signals, such as availability of nutrients and environmental conditions. Restriction point is a decision point which determines whether sufficient nutrients are available with the cell to progress for the cell division. Restriction point also controls the size of the cell. It is the point at which cell growth is coordinated with DNA replication and cell division. In order to maintain constant size, the small daughter cell must grow up to certain size before they divide again. The cell size must be monitored in order to coordinate cell growth with other cell cycle 4 events. The cell growth is regulated by a control mechanism that requires each cell to reach a minimum size before it can pass restriction point. Cell cycle in plants, is regulated by the extracellular growth factors that signal cell proliferation. In the presence of appropriate growth factors, cell passes the restriction point and enter S phase. Once it has passed through restriction point the cell is allowed to proceed through S phase and rest of the cell cycle, even in absence of further growth factor stimulation. If appropriate growth factors are not available in G1phase then progression of the cell cycle is stopped at the restriction point. Cell cycle in plants, is also regulated at G2 to M transition where cell size and nutrient availability are monitored(Geoffrey, 1997). Hormones Hormones play a necessary role in cell proliferation. Cytokinins and auxins the hormones linked with cell proliferation. They play a crucial role in maintaining undifferentiated cells for proliferation during in vitro culture. In 1994 Jacqmard et al. suggested that cytokinins have effects on the G1/S and G2/M transitions, as well as on progression through S phase. Naturally occurring cytokinins are involved in the control of a wide range of biological activities. The hormone cytokinin induces the synthesis of specific cell division proteins which are required for progression of cell cycle. (Genschik et al., 1998). These proteins must be synthesized according to a genetically determined program for progress of cell cycle. (Cleary et al., 2002). Cytokinin is also involved in the activation of CDKs at the G2/M boundary either by direct activation of a phosphatase or by downregulation of the WEE1 kinase. Cell division is inhibited by abscisic acid. Abscisic acid induces the expression of the CDK inhibitor KRP1/ICK1, resulting in a decrease in the kinase activity associated with CDKA (Wang et al 1998). Jasmonic acid application during G1 prevents DNA synthesis, 5 whereas jasmonic acid application during early S phase has only a minor effect on DNA synthesis but it inhibits M phase progression (Swiatek et al., 2002). Ethylene treatment of cell suspensions provoked cell death at the G2/M boundary (Herbert et al., 2001). II. in vitro regulators Potent and selective chemicals mediate inhibition of the cell cycle and are capable of arresting cell in a particular phase of cell cycle. These chemicals are capable of arresting cell cycle via specific interaction with a variety of intracellular protein targets and by genetic restrictions (Crews and Shotwell, 2003). Chemicals involved in cell synchronization are grouped as below: A. Synthetic (Artificial) Products a) Alkylating Agents b) Antimetabolites c) Natural products d) Miscellaneous agents Synthetic products:These are the products synthesized artificially from various chemicals A) Alkylating agents: These agents are capable of introducing alkyl group into biologically active chemical molecules. They cause miscoding, destruction of guanine, and disruption of nucleic acid function. The alkylating occurs due to some chemical groups like bis (2-chloroethyl) group 6 which have a property to form covalent bond with suitable nucleophilic substance in the cell. The main action of alkyalating agents occurs during replication. They affect S-phase leading to blockage in G2-phase and subsequent apoptotic cell death (Goyal et al, 2004). Alkylating agents such as cyclophosphamide, chlorampucil, and melphalan are used to block cell cycle in G2-phase. B) Antimetabolites : Antimetabolites affect synthesis of purines, pyrimidines ,and thereby affect nucleosides. They block cell cycle in S-phase. Antimetabolites prevent the biosynthesis or utilization of normal cellular metabolites. They combine with the same enzymes as physiologically ocuring cellular metabolites but they prevent the metabolic process (Singh and Kapoor, 1996). Antimetabolites include folic acid analogues, purine analogues and pyrimidine analogues (Goyal et al, 2004). Folic acid is essential for synthesis of purine nucleotides and thymidylate, which in turn are essential for DNA synthesis and cell division (H.P. Rang et al, 2005).folic acid is also required for interconversion of aminoacids like serine to glysine, histidine to glutamic acid etc (R.K. Goyal et al, 2004). The main action of the folate antagonists is to interfere with thymidylate synthesis. Folates consist of three elements: a pteridine ring,p-aminobenzoic acid and glutamic acid. Folates are actively taken up into the cells where they are converted into polyglutamates. In order to act as coenzymes, folates must be reduced to tetrahydrofolate (FH4 ). This reaction is catalysed by tetrahydrofolate reductase enzyme. FH4 functions as a cofactor in the transfer of one- carbon units, a process which is essential for the methylation of the uracil in 2-deoxyuridylate (DUMP) to form thymidylate (DTMP) and hence for the 7 synthesis of DNA and for the de novo synthesis of purines.During the formation of DTMP from DUMP, FH4 is converted back to FH2. The folic acid analogues, such as methotrexate has a high affinity for dihydrofolate reductase than FH2; it thus inhibits the enzyme and depletes intracellular FH4. The binding of methotrexate to dihydrofolate reductase involves addition of hydrogen bond or ionic bond not present when FH2 binds (H.P. Rang et al, 2005). Purine analogues are a group of relatively specific CDK inhibitors that are useful for basic cell biology and are lead compounds for antiproliferative therapeutics. Purine analogues are substance that affect the metabolism of the biochemical pathway involved in the synthesis of purines and pyrimidines (R.K.Goyal et al, 2004). Natural products :- These are products extracted from plants, which are used as antimitotic agents. It involves substances such as Colchicine, which is a highly poisonous alkaloid extracted from plants of the genus Colchicum, Vinca alkaloids extracted from plant Vinca rosea etc. (Shown in Table: 1) Miscellaneous agents:Miscellaneous agents such as hydroxyurea, procarbazine, mimosine and nocodazole are involved in cell cycle inhibition. Mode of action of chemical cell cycle regulators are shown in the following table: 8 Inhibitors of cell cycle Cyclophosphamide Chlorampucil Melphalan Methotrexate Fluorouracil Cytarabine Mercaptopurine Mode of action Alkylating agents It forms covalent bond with suitable nucleophilic substance in the cell. It forms covalent bond with suitable nucleophilic substance in the cell. It forms covalent bond with suitable nucleophilic substance in the cell. Antimetabolites As folic acid is required in purines and pyrimidines synthesis.it binds to dihydrofolate reductase.as a result folic acid cannot be converted to folinic acid. It inhibits thymylate synthatase enzyme which is required for thyminemonophosphat e formation. It causes phosphorylation reaction to form arabinosecystidine monophosphate which get incorporatedinto both RNA & DNA. It causes accumulation of 6 thioguanosine 51 phosphate & 6 thioinosine 51 phosphate which incorporate into cellular DNA. 9 Cell cycle phase arrested References G2 phase Rang et al. 2003 G2 phase Rang et al. 2003 G2 phase Rang et al. 2003 S phase Kaufman et al. 1993 S phase Pressacco et al. 1996 S phase Zarilli et al. 1999 S phase Rang et al. 2003 Azathioprine Amphidicolin Thioguanine Lavendustin A Radicicol Lactocystin PS-341 Epoxomicin Aclacinomycin A It causes accumulation of 6 thioguanosine 51 phosphate & 6 thioinosine 51 phosphate which incorporate into cellular DNA. Inhibitor of DNA polymerase a and d in eukaryotic cells It causes accumulation of 6 thioguanosine 51 phosphate & 6 thioinosine 51 phosphate which incorporate into cellular DNA. It is an inhibitor of several protein tyrosine kinases including epidermal growth factor receptor (EGFR) PTK and the nonreceptor PTK, SYK.it is moderately effective inhibitor of tubulin polymerisation It is an inhibitor of receptor tyrosine kinase p60v-src It covalentely binds to the N-terminal threonine of the 20s proteasome subunit X/MB1, which is required for proteolysis It is a specific inhibitor of the proteosome a,b- epoxy ketone class of proteosome inhibitors. It is non-peptide inhibitor of the proteosome, showing selectivity for the chymotrypsin like and 10 S phase Rang et al. 2003 early S phase Borner et al. 1995 S phase Rang, et al. 2003 G1 and G2 phase Crews and Shotwell, 2003 G1 and G2 phase Soga et al. 1998. G1 phase Crews and Shotwell, 2003. G1 phase Crews and Shotwell, 2003. Crews and Shotwell, 2003. G1 phase G1 phase Crews and Shotwell, 2003. Trichostatin Trapoxin Vinblastine Vincristine Colchicine Pacilitaxel Epothilonea/B Discodermolide PGPH activities of proteosome. It is an inhibitor of histone deacetylase It is a potent inhibitor of histone deacetylase Natural products It binds to protein tubulin & inhibits polymerisation of microtubules.thus, prevents spindle formation & blockage of mitosis at metaphase. It binds to protein tubulin & inhibits polymerisation of microtubules.thus, prevents spindle formation & blockage of mitosis at metaphase. It depolymerises cytosolic microtubules at higher concentrations, while at lower concentrations it inhibits such depolymerization It induces cell cycle arrest via the stabilization of tubulin in an apparently manner It induces cell cycle arrest via the stabilization of tubulin in an apparently manner It induces cell cycle arrest via the stabilization of tubulin in an apparently 11 G1 and G2 phase G1 and G2 phase Gray and Ekstrom 1998 Crews and Shotwell, 2003. Metaphase Crews and Shotwell, 2003. Metaphase Chan et al. 1998 Metaphase Crews and Shotwell, 2003. Metaphase Crews and Shotwell, 2003. Metaphase Crews and Shotwell, 2003. Metaphase Crews and Shotwell, 2003. manner Latrunculin A/B Jasplakinolide Mycalolide B Dolastatin 11 Monastrol Camptothecin Hydroxyurea Procarbazine L-mimosine Nocodazole It binds G-actin and subsequently depolymerize actin filaments It binds G-actin and subsequently depolymerize actin filaments It binds G-actin and subsequently depolymerize actin filaments It inhibits cell cycle by binding actin, resulting in reorganization of the actin filament network It binds specifically to the mitotic kinesin Eg5 implicated in spindle bipolarity Miscellaneous agents It inhibits DNA topoisomerase I It inhibits ribonucleoside diphosphate reductase that catalyses conversion of RNA to DNA. It inhibits protein and nucleic acid synthesis and supress mitosis It is an effective inhibitor of DNA replication. It acts by preventing formation of replicative forks Promotes tubulin depolymerization 12 Metaphase Crews and Shotwell, 2003. Metaphase Crews and Shotwell, 2003. Metaphase Crews and Shotwell, 2003. G2/M phase Crews and Shotwell, 2003. Metaphase Crews and Shotwell, 2003. G2/M phase G1 phase Leyden et al. 2000. , G1 phase Rang, et al. 2003 G1 phase Lin et al. 1996. Metaphase Bunz et al. 1998. Biotic factors i. Checkpoints ii. CDKs iii. CDK inhibitors Checkpoints Cycle checkpoints are used by the cell to regulate cell proliferation. There are two main checkpoints viz, G1/S checkpoint and the G2/M checkpoint. G1/S Cell is a rate-limiting step in cell cycle and is also known as restriction point(Robbins and cotran et al, 2004).various checkpoints work together and would not allow the replication of damaged chromosomes. This checkpoints will not allow incomplete chromosomes to pass to the new daughter cells.the G2 checkpoint prevents mitosis until DNA replication is complited.it senses the unreplicated DNA and then generates a signal which prevents the initiation of M phase. Cell remains in G2 phase till the DNA is completely replicated. After DNA replication cell is allowed to enter mitosis and the chromosome are distributed between the two daughter cells. Cell cycle in G2 check points is also arrested due to DNA damage. This arrest gives time to DNA to get repaired. DNA damage also arrests the cell cycle in G1. The G1 arrest allow DNA to get repaired before it enters S phase. If the cell enters S phase without DNA repair than the damaged DNA would be replicated. One of the important checkpoint that maintains the integrity of genome in two daughter cells is present at the end of mitosis. It monitors the alignment of chromosomes on the mitotic spindle. This ensures the accurate distribution of complete set of chromosomes to the two daughter cells (Geoffrey, 1997). 13 Cyclin dependent kinase The principle regulators of eukaryotic cell cycle at molecular level are the cyclin dependent kinase (CDK) and cyclins which are conserved in plants (Shaul et al. 1996).cyclin dependent kinase govern the cell cycle. Different CDK-cyclin complexes phophorylate a plethora of substrates at the key G1-to-S and G2-to-M transition points, triggering the onset of DNA replication and mitosis. The catalytic CDK subunit is responsible for recognizing the target motif (serine or threonine followed by a proline) present in substrate proteins, whereas exchangeable regulatory cyclins, play a role in discriminating distinct protein substrates (Inze and De veylder, 2006). To ensure that the reactions are controlled by the engine are carried out to completion with sufficient accuracy and in proper order, its activity is feedback regulated at checkpoints (Hartwell and Weinert, 1989). At checkpoints its kinase activity becomes limiting for further progress until the feedback control network signals the completion of the dependent reactions, which then activates the kinase for passage through to the next checkpoint (Doerner, 1994). Cell cycle checkpoints are used by the cell to monitor and regulate the progress of cell cycle (Stephen, 1996). Two main checkpoints exist: The G1/S checkpoint and G2/M checkpoint. G1/S transition is the rate limiting step in the cell cycle and is also known as restriction point (Robbin and Cotran et al. 2004). Upon receiving a promitotic extracellular signal, G1 cyclin-CDK complexes become active to prepare cell for S phase promoting the expression of transcription factors that in turn promote the expression of S cyclins (Cs) and of enzymes required for DNA replication. The G1 cyclin-CDK complexes also promote the degradation of molecules that function as S 14 phase inhibitors by targeting them for ubiquitination. Once, a protein has been ubiquitinated, it is targeted for proteolytic degradation by the proteosome. Proteolysis ensures that the cell cycle moves unidirectionally by trigerring the rapid proteolysis of target proteins, thus providing an irreversible mechanism that drives the cell cycle forward. Ubiquitin-proteosome system uses the highly conserved polypeptide ubiquitinin as a tag to mark target proteins for degradation by the 26S proteosome. Ubiquitination involves the generation of poly ubiquitin chains on target proteins through the combined action of ubiquitin carrying enzymes (E2s) and ubiquitin protein ligase (E3s) that bring target proteins and E2s together. Plants cyclins A and B type cyclins contain destruction box (D- box) sequences that mediate protein degradation (Genschik et al. 1998, Renaudin et al. 1996).proteins that are degraded through the proteosome frequently require prior phosphorylation. Proteolysis of target proteins seems to be proceeded by CDK-dependent phosphorylation. CDKs are phosphorylated on both an N-terminal Tyr and Thr residue. Tyr phosphorylation is catalysed by the WEE1 kinase and both Tyr and Thr phosphorylation is counteracted by the dual specificity phophatase CDc25. Plants possess a WEE1 kinase that is involved in the inhibitory phosphorylation of CDKs (Sorell et al. 1999,Vandepoele et al. 2002, Sun et al. 1999). Biochemical and genetic evidence suggest that higher plants have a phosphatase that can activate CDK/cyclin complexes (Wein et al, 2005). Active S cyclin- CDK complexes phosphorylate proteins that make the pre- replication complexes assembled during G1 phase on DNA replication origins. The phosphorylation serves two purposes: to activate each already assembled pre-replication complex, and to prevent new complexes from forming. This ensures that every portion of cells genome will be replicated only once. Mitotic cyclinCDK complexes, which are synthesized but inactivated during S and G2 phase, promote the 15 initiation of mitosis by stimulating downstream proteins that are involved in chromosome condensation and mitotic spindle assembly. A critical complex activated during this process is a ubiquitin ligase known as the anaphase promoting complex (APC), which promotes degradation of structural proteins associated with the chromosomal kinetochore. APC also targets the mitotic cyclins for degradation, ensuring that telophase and cytokinesis can proceed. Cell cycle inhibitors Cell proliferation is also regulated by cell cycle inhibitors. During cell division activity of cyclin dependent kinase is controlled by cdk inhibitors ICK (interactor/inhibitor of CDKs) and KRPs (Kip-related proteins). They bind with specific CDK/cyclin complex and help in controlling cdks activity (Tank et al. 2011). During cell division certain specific protein are synthesized in cell which interact with CDKs to terminate their function. CDK activity can be terminated by binding, phosphorylation or dephosphorylation of these proteins (Morgan, 1997). 16