Download SERVICES BIOINFORMATICS Process automation Our team can

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SERVICES
BIOINFORMATICS
Process automation
Our team can automate many repetitive, fastidious and prone to human error with the use of
programming. Does your staff spend long hours trying to calculate statistics on web sites or are they
annotating genes manually on public database? All these are but a few examples of automation we can
help you with.
Support for bioinformatics software
Certain software, algorithms or programming language (ex: R, Plink, Python, Perl) require the use of a
particular operating system (Linux) or the expertise of coding notions that are not familiar to your
research team. We are available to provide support to your team.
Large data analysis
Some data might be too large to analyze on traditional tools (Excel). Our team can help for the analysis,
the formatting, the transformation or the extraction of data.
High performance computing
Calcul-Québec provides all the Investigators with an access to their servers for large informatics task
that require a lot of resources. This platform is hosted on a Linux server that requires the ssh protocol
to communicate. Our team can adapt your processes on their servers.
Databases admin
We can provide support for the building of any kind of database: samples, patients, laboratory material
as well as clinical and genetic data. We can also provide help to modify (add tables) or functionality to
existing databases. We also provide support for database migration (SQL)
Project consultation
A service of consultation can also be provided to your team: certain projects with specific bioinformatics
need an evaluation of feasibility and resources that require a knowhow of both informatics as well as
molecular-biology.
Database WWW interface
We can build a local web page to access your team’s private database. Wiki construction for the lab,
etc.
Scientific core facilities of the CRCHUM
Bioinformatics
Phone : 514 890-8000 #31437
[email protected]
Technical supervisor: François Harvey
Bioinformatician : François-Christophe Marois-Blanchet
August 31, 2016