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The Liggins Education Network for Science LENScience Senior Biology Seminar Series Breast Cancer and Biotechnology Questions and Discussion Pre-seminar School Discussion During Year 12 Biology you learnt about cell biology, genetics and variation. It is useful to review these core concepts before this seminar. A list of the Year 13 concepts linked to the seminar can be found on page 4 of this handout. Don’t worry if you have not covered these in class yet. It is recommended that students review this seminar again later in the year once you have completed molecular genetics and biotechnology. A Review of Cell Basics Use your knowledge of Y12 Biology and the information in the seminar paper to discuss the following questions. 1. What are the key differences between mitosis and meiosis? 2. The diagram on the right shows the cell cycle. Explain the purpose of each of the processes in this cycle. Test your knowledge with the cell cycle game at .......... http://nobelprize.org/educational_games/medicine/2001/ cellcycle.html 3. What is the name that scientists use for programmed cell death? What are some of the reasons why this may occur? 4. DNA replication is a semi-conservative process. Explain what this means and why it is advantageous. 5. Protein synthesis is a two stage process involving transcription and translation. Explain what happens in each stage of protein synthesis. 6. Scientists talk about coding and noncoding DNA. What do these terms mean? 7. What does the term GENE EXPRESSION mean? 8. You have learnt about mutations. Review the following terms relating to mutations: - Spontaneous vs Induced - Harmful vs Beneficial vs Neutral - Gametic vs Somatic - Gene vs Chromosome 1 Cancer Focus Questions Use the information in the seminar paper to discuss these questions. These concepts will be explained in depth during the seminar. 11. What is the key difference between a cancerous cell and a non-cancerous cell? 12. In simple terms—what is a tumour? 13. Rates of cancer are generally higher in older people than they are in younger people. What factors could contribute to this trend? 14. Douglas Hanahan and Robert Weinberg have described the HALLMARKS OF CANCER. What do these hallmarks or characteristics all lead towards? Breast Cancer and Growth Hormone 15. What is the key function of human growth hormone? 16. Why would human growth hormone secretion be useful in breast tissue? 17. What is the key link that the Liggins Institute scientists have made between growth hormone and breast cancer? 18. Why is the study of gene expression useful to scientists wanting to understand more about cancer? Vocabulary Nucleic Acid DNA RNA Nucleotide Adenine Thymine Cytosine Guanine Uracil Genome Chromosome Karyotype Gene Allele Genetic Code Mitosis Meiosis The Cell Cycle DNA Synthesis Protein Synthesis Transcription Translation Triplet Codon Anti-codon Amino Acid Polypeptide chain Protein Semi-conservative replication Gene Expression Apoptosis Mutation Mutagen Gene Profiling Genome Analysis Human Genome Project Gel Electrophoresis PCR Microarray Reverse Transcriptase Cell Culture EXAMINATIONS AND PREPARATION Good teaching will give you experience during the year of many CONTEXTS that are linked to CONCEPTS you are learning about. Breast Cancer is a CONTEXT. Gene expression, mutations, and the cell cycle are all CONCEPTS. The experience of participating in this seminar and the discussion questions will help you develop the SKILLS required to interpret scientific information in CONTEXTS that you may not have come across before. This skill is useful in examinations. Please expect to be assessed on understanding of concepts in the NZQA examinations. Please do not expect to be assessed on knowledge of breast cancer in the NZQA examinations. The NZQA Scholarship examination is based on content relating to knowledge assessed in ALL Level 3 Achievement Standards. This includes both the internally and externally assessed achievement standards and therefore DOES include biotechnology. Your preparation for the NZQA Scholarship examination must therefore include revision of the concepts and knowledge within the biotechnology standard (AS90718). The scholarship examination expects students to integrate biological knowledge. You should be expecting to look for and show links between the biotechnology concepts and concepts relating to molecular biology, genetics, ecology and evolution. This seminar and the challenge questions require you to make links between biotechnology and molecular genetics. As with many scholarship questions, you are also provided with information that you should use in the answer. This is a seminar not an examination, so you are being provided with more overview information regarding the use of biotechnology that you would be in an examination. 2 Post Seminar Challenge Questions The Cell Cycle 1. The cell cycle controls growth and reproduction in cells. During the cycle, there are checks to ensure that each stage has been completed correctly and that the cell is ready to move onto the next stage (indicated by the arrows in this diagram). Discuss the role of check points in the cell cycle and the potential consequences of loss of control of the cycle. 2. In the process of PCR used to study the level of expression of a gene, the reverse transcriptase reaction is used to create a strand of cDNA from a sample of RNA extracted from the tissue being studied. Explain why RNA rather than DNA is used as the starting point for this process. 3. Around 5-10% of cancer patients inherit a genetic pattern that gives them increased susceptibility to cancer over their lifetime. BRAC-1 and BRAC-2 are well known alleles associated with an increased susceptibility to breast cancer. Gene profiling can be used to identify individuals who carry these alleles. Discuss the potential ethical implications that are created when one family / whanau member chooses to find out their gene profile for an allele such as BRAC-1. Higher Level Thinking Challenge Question 4. Each year in New Zealand, approximately 2,400 women and 20 men are diagnosed with breast cancer and approximately 600 people die of breast cancer. 1 in 9 NZ women will be affected by breast cancer in their life time. Biotechnologies play a major role in the quest to understand cancer at a molecular level which can lead to the development of effective treatments. Technologies used in cancer research include: gene profiling genome analysis gene cloning and transgenesis cell culture The Human Genome Project has provided extensive information which allows scientists to look at genetic differences between individuals. Microarray technology combined with this information allows scientists and clinicians to look at genetic differences between individuals and develop individualised therapies. Discuss how the use of named biotechnologies has enabled scientists to develop understanding of cancer at a molecular level and how this understanding can then be used in the development of effective treatments. POST YOUR IDEAS, QUESTIONS AND SUGGESTED ANSWERS AT http://lens.auckland.ac.nz/index.php/Biotechnology_and_Cancer_Discussion_2009 A reminder of the 2007 Scholarship Biotech Question: QUESTION THREE (8 marks) HUMAN DISORDERS ARE INCREASINGLY BEING DIAGNOSED AND TREATED USING BIOTECHNOLOGICAL APPLICATIONS SUCH AS: • Genetic testing, including testing of adults through to pre-birth diagnosis (for example: pre-implantation genetic diagnosis (PIGD) of embryos, amniocentesis or chorionic villus testing) • Gene therapy • Stem cell research • Xeno-transplantation. Discuss how the use of named biotechnological applications may impact on the gene pool and the future biological evolution of Homo sapiens. To access the assessment schedule for this NZQA Scholarship Question go to…………………………….. http://www.nzqa.govt.nz/scholarship/subjects/resources.html Interested in finding out about Herceptin? To watch a presentation that explains why herceptin is only effective for some breast cancer patients, go to www.insidecancer.org Click on Diagnosis and Treatment - Pharmacogenetics. To find out about how biotechnologies are used to determine whether a cancer patient is suitable for Herceptin treatment download this video from HotScience http://www.hotscience.co.nz/video_detail.php?videoid=122 3 Level 3 Achievement Standards linking to this seminar: AS 90714 Biology 3.2 Research a contemporary biological issue AS 90715 Biology 3.3 Describe the role of DNA in relation to gene expression AS 90718 Biology 3.6 Describe applications of biotechnological techniques Key Concepts from Level 3 Biology that link to this seminar: Below are selected objectives from the Y13 biology programme that link to this seminar. THESE ARE NOT A FULL LIST OF THE CONCEPTS IN YOUR COURSE. You should review these concepts before the seminar. Molecular Genetics / Mutations Please remember these are only the objectives linking to this seminar—refer to your unit hand out at school for a full list Describe DNA in terms of structure and function Describe the process of DNA replication and the role that enzymes have in this process Describe the process of protein synthesis and the role of DNA and enzymes in the production of proteins Describe the role of DNA in gene expression and the determination of phenotype Describe the control of gene expression at the transcriptional level in prokaryotes and eukaryotes Describe the role of metabolic pathways in the control of gene expression Describe the process of mitosis and meiosis. Define the term mutation and identify ways in which mutations may affect an organism Identify the causes of mutations Differentiate between somatic and gametic mutations and identify the potential effect of each of these. Show understanding of molecular genetics by using the core knowledge to give reasons for events that happen in the cell and linking ideas Show understanding of the cause and effect of mutations by using the core knowledge to link ideas Biotechnology Please remember these are only the objectives linking to this seminar—refer to your unit hand out at school for a full list Describe the techniques involved in gene cloning and how gene cloning meets human needs and demands. Describe the techniques involved in transgenesis and how transgenesis meets human needs and demands. Describe the techniques involved in DNA profiling and how DNA profiling meets human needs and demands. Describe the techniques involved in genome analysis and how genome analysis meets human needs and demands. Describe the technique of tissue culture and how it meets human needs and demands. Be aware of the differing viewpoints of the use of biotechnological applications. Show understanding of applications of biotechnological techniques by using core knowledge to link ideas Copyright © Liggins Education Network for Science, 2009 4 http://LENS.auckland.ac.nz