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Chemistry for Biomedical Engineering. Exercises Topic 8 Open Course Ware Universidad Carlos III de Madrid. 2012/2013 Authors: Juan Baselga & María González Exercises Topic 8: Reactions in Organic Chemistry 1. Which of the following compounds can exist as cis-trans isomers? For each than can, draw both isomers and the two chair conformers formed by interconversion, showing the orientations in space of the –OH and –CH3. (a) (b) (c) Solution: Only (a) and (b) will have cis-trans isomers (a) CF3 H O O H F3 C O H H F3C H H CF3 H cis O H trans (b) F3C O H H H CF3 O CF3 O H H O H H F3 C H trans cis 2. Find the molecular structure of lycopene (C40H56), a compound partially responsible for the red colour of some fruits (tomatoes) and demonstrate that it is a terpene. 3. Standard hydrogenation enthalpies, ∆Hº, for several cis-trans alkene isomer pairs are shown in the following Table. (a) Can be used ∆Hº values as a measure for the relative stability of the isomers? (b) Can you explain why ∆Hº for trans-2,2,5,5-tetramethyl-3-hexene is 39 kJ/mol higher than the corresponding cis isomer while it is only 4 kJ/mol higher for the trans-2-butene? ∆HºHydrog (kJ/mol) cis-2-butene -119.7 trans-2-butene -115.5 cis-2,2,5,5,-tetramethyl-3-hexene -151.5 trans-2,2,5,5,-tetramethyl-3-hexene -112.6 Solution:(a) We know from thermochemistry the relation between enthalpy and internal energy H=E+pV. In a chemical process, enthalpy variation is given by ∆H=∆E+∆(pV). For constant Chemistry for Biomedical Engineering. Exercises Topic 8 Open Course Ware Universidad Carlos III de Madrid. 2012/2013 Authors: Juan Baselga & María González pressure processes, which are the majority of the chemical process, in which solids and/or liquids participate, ∆(pV)∼0 so ∆H∼∆E. Therefore, we can use reaction enthalpies as a measure of the relative stability of compounds provided that the initial or final states are the same. In the hydrogenation of alkene isomers, the initial states are different but the final states are the same as illustrated in the following scheme for 2-butene isomers CH3 CH3 H H H CH3 CH3 H H2 CH2 CH3 CH3 Pt CH2 (b) The reason why cis isomers are less stable than trans is the steric stresses induced by the substituents of the double bond. This is illustrated in the following scheme. Hydrogen atoms in the cis-2-butene are in the same region of space creating thus a repulsive stress. This phenomenon is more intense in cis-2,2,5,5,-tetramethyl-3-hexene since there are methyl groups which are more voluminous than hydrogen atoms H H H H C C H H C H H CH3 H C 3 H C H H H H H 4. Analyze the following electrophilic addition reactions to 3-methyl-2-pentene: a. H2/Pt. b. Br2/ClNa. c. H2SO4 cc followed by addition of H2O. Solution: CH3 CH3 CH3 CH CH2 CH3 CH3 C CH3 CH2 CH2 CH3 CH3 CH Br C CH2 CH3 CH2 OH Br 5. Product B discolors aqueous solutions of KMnO4. When B is treated with O3 followed by Zn/CH3-COOH, it is transformed into acetone and formaldehyde. Deduce the structure of B. Solution: H3 C H C H3 C C H 6. Which are the reaction products when propine is treated with?: d. Water in the presence of H2SO4 and HgSO4 e. ClH in excess Solution: Cl OH O H3C a) H3C C CH2 H3 C C CH3 b) C Cl CH3 Chemistry for Biomedical Engineering. Exercises Topic 8 Open Course Ware Universidad Carlos III de Madrid. 2012/2013 Authors: Juan Baselga & María González 7. Which are the alkenes you will select as starting molecules to obtain the following compounds? : H OH a. (1S,2R)-1-methylcyclohexane-1,2-diol OH b. 2-methylpentane-2,3-diol OH H3 C OH C H3 c. butane-1,2,3,4-tetrol Solution: H OH C H3 OH H3C 1-methylcyclohexene OH C H3 OH C H3 2-methylpent-2-ene OH HO OH buta-1,3-diene OH 8. Which are the alkynes you will select to prepare the following ketones? O b. pentan-3-one a. pentan-2-one O Solution: O OH HgSO 4 pent-1-yne pent-1-en-2-ol HgSO 4 O OH pent-2-yne pent-2-en-3-ol 9. Which are the expected products for the following reactions? + 2Cl2 ? + 1HBr ? a. b. Solution: + c. . Cl Cl a. + 2Cl2 + 1HBr Cl Br Cl Br + 1HBr 1HBr ? Chemistry for Biomedical Engineering. Exercises Topic 8 Open Course Ware Universidad Carlos III de Madrid. 2012/2013 Authors: Juan Baselga & María González 10. Which are the expected products for the following reactions? a) p-Xylene (1,4-dimethylbenzene)+ Cl2/Fe b) Toluene + CH3-CH2Cl + AlCl3 c) p-CH3O-C6H4-CH=CH-C6H5 + HBr d) Benzene + CH3-CH2-COCl + AlCl3 e) Benzene + succinic anhydride + AlCl3 f) 1-phenyl-1,3-butadiene + 1 mol H2 + Ni/30oC/2 atm Solution: Cl b) a) O H 3C O d) c) Br O e) O f) OH 11. Which are the main products in the mononitration of a. o-nitrotoluene b. p-nitrotoluene c. m-dibromobenzene d. p-nitroaniline e. m-dinitrobenzene f. m-cresol (3-CH3-C6H4OH) Solution: g. o-cresol h. p-cresol i. p-C6H4-(COOH)2 (tereftalic acid), j. p-xylene Chemistry for Biomedical Engineering. Exercises Topic 8 Open Course Ware Universidad Carlos III de Madrid. 2012/2013 Authors: Juan Baselga & María González [NO2+] b) H3 C NO2 H3 C NO2 O2N d) [NO2+] H2 N H2 N NO2 NO2 O 2N a ) [NO2+] H3C H3C NO2 O2 N O2 N c ) [NO2+] Br Br NO2 Br Br NO2 e ) + [NO2 ] O2 N O2 N NO2 NO2 HO g ) HO [NO2+] H3C H3C NO2 NO2 i ) HOOC [NO2+] COOH HOOC COOH Chemistry for Biomedical Engineering. Exercises Topic 8 Open Course Ware Universidad Carlos III de Madrid. 2012/2013 Authors: Juan Baselga & María González OH OH f) [NO2 OH + H3C H3C H3C NO 2 O 2N NO 2 h) [NO2 H3C + OH H3C OH NO 2 j) [NO2+ H3C C H3 H3C C H3 12. Design a synthetic route to obtain the following products starting from benzene f. p-nitrotoluene a. m-nitrophenylmethylketone b. m-nitrotoluene c. p-bromonitrobenzene Solution:a) Alkylation with CH3Cl followed by nitration; b) Acylation with CH3COCl followed by nitration; c) Nitration followed by acylation with CH3Cl; d) Bromation followed by nitration 13. The Friedel-Crafts electrophilic substitution of benzene with 2-chloro-3-methylbutane gives two products, being one of them the most abundant. Explain the structures of both. Solution: Cl AlCl3 C + + C + C H3 1,2-dimethylpropylbenzene 1,1-dimethylpropylbenzene 14. How can you prepare diphenylmethane starting from benzene and an adequate acyl chloride? Solution: O O Cl + AlCl3 diphenylmethanone H2 /Pd benzylbenzene Chemistry for Biomedical Engineering. Exercises Topic 8 Open Course Ware Universidad Carlos III de Madrid. 2012/2013 Authors: Juan Baselga & María González 15. Order the following alcohols according to their acidity: Phenol, p-methylphenol, p(trifluoromethyl)phenol. Is p-cyanophenol more acid than phenol? Solution: p-(trifluoromethyl)phenol > Phenol > p-methylphenol p-cyanophenol is more acid than phenol 16. Draw the structural formulas for the alkenes formed by dehydration of the following alcohols: (a) 3-methyl-2-butanol; (b) 2-methylcyclopentanol; (c) cyclohexylmethanol Solution: methylenecyclohexane 2-methylbut-2-ene 3-methylcyclopentene 3-methylbut-1-ene 1-methylcyclopentene 17. Draw the structural formulas for the intermediate and final compounds when the following alcohols are treated with a strong oxidant: (a) isopropanol; (b) menthol; (c) 2-methylpropan-2ol; (d) 1-propanol. Solution acetone 2-isopropyl-5-methyl-cyclohexanone CO 2 + H2O propanal propionic acid 18. What are the reaction products of 2,6-diisopropylcyclohexanol and 2,6-diisopropylphenol with aqueous sodium hydroxide? Solution No reaction 2,6-diisopropylcyclohexanol 2,6-diisopropylphenol sodium 2,6-diisopropylphenolate 19. Sodium borohydride (NaBH4) is a common reducing agent in organic chemistry, less reactive than LiAlH4. Deduce the reaction products when the following molecules are treated O with NaBH4 O O Chemistry for Biomedical Engineering. Exercises Topic 8 Open Course Ware Universidad Carlos III de Madrid. 2012/2013 Authors: Juan Baselga & María González Solution: OH O NaBH4 O H OH NaBH4 O H OH NaBH4 20. Deduce the parent carbonyl compounds whose reduction originates the following alcohols OH OH C H2 O H C H C H3 H Solution: O C H2 O H H LiAlH4 benzaldehyde OH O C H C H3 C H3 LiAlH4 1-phenylethanone OH O LiAlH4 H cyclohexanone 21. 2-methyl-2-pentanol can be synthesized from two carbonyl compounds A and B using methyl magnesium bromide as Grignard reactive. A needs two moles of CH3MgBr while B only needs one. Deduce the structural formula of A and B. Solution: O + CH3MgBr C H3 BrMgO C H3 + C H3 H+ O O HO C H3 BrMgO 2CH3MgBr HO C H3 H+ C H3 22. Propose a synthetic route to prepare p-cresol from benzene (two steps). Solution: H3 C Cl C H3 C H3 AlCl3 NaOH O SO 3 ? S H2SO4 HO O HO C H3 Chemistry for Biomedical Engineering. Exercises Topic 8 Open Course Ware Universidad Carlos III de Madrid. 2012/2013 Authors: Juan Baselga & María González 23. How would you prepare the following ethers using the Williamson synthesis? O H3 C C H3 O O Solution: NaH O H3 C + I HO OH O C H 3 NaH H3 C H 3C + I H 3C C H3 NaH O H3 C + I C H3 HO 24. Propose the reaction products when acetone is treated with: a) Hydroxylamine (NH2OH) H H 2N b) Butanediol N O N + O c) 2,4-dinitrophenylhidrazine d) Methyl magnesium bromide – – N+ O O Solution: O propan-2-one oxime + H2N OH OH N H2 C O + H2 C O HO OH C H2 O 2,2-dimethyl-1,3-dioxocane N N H N O O C H2 H3 C H H2N C H2 N H3 C O + O N – O + – N O + + O N O O N-(isopropylideneamino)-2,4-dinitro-aniline – H 3C O + H3 C [Mg] Br + H3 C OH C H3 2-methylpropan-2-ol – C H3 Chemistry for Biomedical Engineering. Exercises Topic 8 Open Course Ware Universidad Carlos III de Madrid. 2012/2013 Authors: Juan Baselga & María González 25. Find if the following molecule is D-Gucose. Draw the two possible six membered rings formed by hydroxy addition to the aldehyde. Solution: D-Glucose is (2R,3S,4R,5R)-2,3,4,5,6-Pentahydroxyhexanal. We need to find the R/S configuration of each carbon. Numbers start from the aldehyde (1). We apply Cahn rules to each carbon as shown in the following images. In these, the original image has been rotated to allow the lowest priority atom to point away from the image 2 1 2 2 3 3 3 1 1 4 2 3 1 5 2 3 Therefore, C2 is R, C3 is S, C4 is R and C5 is also R. Therefore, this molecule is D-glucose. Ring closening can occur by hemiacetal formation between carbon C1 and the hydroxy group either from C4 or C5. If ring closes by C4, a five membered ring is formed. Six membered ring (pyranose) is formed closing by C5. With a Fischer projection it is seen more clearly H H O O H OH HO H H OH HO H H OH H OH H OH H OH OH H OH H H Furanose ring H Pyranose ring Chemistry for Biomedical Engineering. Exercises Topic 8 Open Course Ware Universidad Carlos III de Madrid. 2012/2013 Authors: Juan Baselga & María González Hemiacetal formation transforms carbon C1 into a chiral center since it is bonded to –H. OH, -C and –O. Therefore, there are two ways to locate these four substituents that give rise to the two different optical isomers. To view them more clearly a special projection called Haworth projection is commonly used: CH2 OH CH2 OH O O OH OH HO OH HO OH OH OH 26. Show reagents and experimental conditions to convert cyclohexanone to each of the following compounds (c) (a) (b) (d) (e) Solution:a) Oxidation with K2Cr2O7; b) Dehydration with H2SO4; c) Addition of HBr; d) Addition of Br2; e) Hydrogenation with a catalyst as for example Pt. 27. Product A is obtained reacting benzene with one mole of CH3Cl using AlCl3 as catalyst. A is subjected to a strong oxidation treatment giving the product D. If instead of this route, benzene is treated with acetyl chloride (CH3COCl) in the presence of AlCl3 and afterwards, with I2 /NaOH followed by acid treatment, the same final product D is obtained. Deduce the structural formulas of all the compounds. Solution: CH3-Cl KMnO 4 AlCl3 A AlCl3 C CH3COCl / AlCl3 I2 /NaOH B CH3-I C 28. Propose synthetic routes to obtain benzoic acid from the following substances: a) Toluene b) Benzonitrile c) Acetophenone Chemistry for Biomedical Engineering. Exercises Topic 8 Open Course Ware Universidad Carlos III de Madrid. 2012/2013 Authors: Juan Baselga & María González d) Benzyl alcohol e) Benzaldehyde Solution: (a) (b) O O N OH KMnO4 OH H2O / H+ (c) (d) O O I2 /NaOH CH3-I O OH + OH OH KMnO4 (e) KMnO 4 29. Write the reactions of acetic acid with: a) KOH, b) LiAlH4, c) SOCl2, d) NH3, e) PCl5 and C6H6/AlCl3 f) P2O5 g) Ethanol/H+, h) H2/Ni catalyst subsequently Solution: O O P2O5 KOH – O K+ O O LiAlH4 O OH OH O O O Ethanol/H+ O OH SOCl2 Cl H2/Ni catalyst O NH3 O NH2 O C6H6/AlCl3 PCl5 Cl with Chemistry for Biomedical Engineering. Exercises Topic 8 Open Course Ware Universidad Carlos III de Madrid. 2012/2013 Authors: Juan Baselga & María González 30. Propose the reaction products for the following acyl nucleophilic substitution reactions: O a. H 3C O C H3 NaOH H2O O O b. Na+ -OCH3 H3 C O C H3 CH3OH O c. NH3 H3C Cl Solution: O O H3 C O C H3 NaOH H2O O – O Na+ H3 C O O Na+ -OCH3 H 3C O C H3 CH3OH 2 O H3 C O C H3 O NH3 H3 C Cl H3 C NH2 31. Using an acid chloride and an amine or ammonia, propose a synthetic route to obtain: a) CH3-CH2-CONH-CH3 b) N,N-diethylbenzamide c) Propanamide Solution: Chemistry for Biomedical Engineering. Exercises Topic 8 Open Course Ware Universidad Carlos III de Madrid. 2012/2013 Authors: Juan Baselga & María González 32. Hydroxyacids are molecules that behave as acids and alcohols. When the two functionalities are separated an appropriate distance the molecule looses spontaneously a water molecule by intramolecular esterification forming a cyclic compound named lactone. Five member rings are called γ-lactones and six member rings δ-lactones. Find the corresponding hydroxyacids from which the following lactones are formed: C H3 a. c. O O H3 C O O C H3 O b. d. O H3 C O O Solution: C H3 O O O HO HO O H3 C OH O OH O O C H3 O O HO HO OH O OH H3 C O O 33. A given compound A (C2H4O2) is divided in three portions. The first one is treated with thionyl chloride giving B which reacts with methylamine to give C. C is reduced with LiAlH4 to give D, a secondary amine (C3H9N). The second portion is treated with P2O5 to give E which is treated with D to give two products, F, an amide (C5H11NO), and A. The third portion is treated with methanol in acid media to give G; G is treated with ammonia giving H, which is reduced with LiAlH4 to give a primary amine I (C2H7N). Deduce the structural formulas of compounds A to I. Solution: The reactions that give B, E and G products are typical nucleophilic substitutions. A must be an acid. There is only one acid with two carbon atoms: acetic acid. A acetic acid B acetyl chloride A acetic acid A acetic acid A E acetyl acetate D N-methylethanamine C N-methylacetamide F N-ethyl-N-methyl-acetamide G methyl acetate H acetamide I ethanamine Chemistry for Biomedical Engineering. Exercises Topic 8 Open Course Ware Universidad Carlos III de Madrid. 2012/2013 Authors: Juan Baselga & María González 34. Show how n-propylamine can be prepared starting from the following substances: a) propanal d) propanamide b) 1-nitropropane e) propanol c) propanenitrile Solution: Br + NH2 NH3 NH O + H2 NH3 NH2 Pt H O H2 / Pt or N O N O NH2 SnCl2 / H+ LiAlH4 NH2 LiAlH4 NH2 NH2 O O NH3 ?KMnO4 OH OH O – + O NH4 H4LiAl ? NH2 NH2