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Molluscan Studies - Oxford Academic
Molluscan Studies - Oxford Academic

... within P. hochstetteri lignaria, due to their assumed hybrid origin; however, Powell’s (1979) classification is still followed by some authors (e.g. Trewick et al., 2008; Walker et al., 2008). Many of these P. lignaria subspecies are distributed along the Mokihinui River valley and associated catchme ...
File
File

... Which of the following is not a correct statement about third generation sequencing? a) A single DNA molecule is sequenced on its own b) Different bases interrupt an electric current for a particular length of time a compound and an isotope; a molecule c) DNA moves through a small nanopore a molecu ...
FEMS Microbiology Letters
FEMS Microbiology Letters

... PFO and tetrameric POR/VOR/KOR. Sequence alignments performed for only some of these oxidoreductase groups are scattered in the literature [2,16^18]. Most of the tetrameric and dimeric oxidoreductase-containing species do not possess a homodimeric PFO. Campylobacter jejuni is an exception as it cont ...
Kinetic MoDiversity of Hydrocarbon-Related Catabolic Genes in Oil
Kinetic MoDiversity of Hydrocarbon-Related Catabolic Genes in Oil

... anaerobic hydrocarbon-degrading micro-organisms in environmental samples [32], as well as to study the microbial community structure of sulfate-reducing enrichment cultures growing on petroleum hydrocarbons, where Desulfosarcina ovata was showed to be dominant [33]. bamA was also used as a biomarker ...
Identification of logical extra-ribosomal functions
Identification of logical extra-ribosomal functions

... The eukaryotic 80S ribosome consists of 60S large subunit and 40S small subunit. This eukaryotic ribosome is more complex and consists more components than prokaryotic ribosome and significantly larger in size (Vallabhaneni, 2009). The 60S subunit consists of three rRNAs (5S, 28S and 5.8S) and about ...
PERL - unimore.it
PERL - unimore.it

... Similar to normal arrays but the elements are identified by keys and not indices. The keys can be more complicated, such as strings of characters. Hashes are indicated by % and can be initialized with lists like arrays: ...
Variables
Variables

... Similar to normal arrays but the elements are identified by keys and not indices. The keys can be more complicated, such as strings of characters. Hashes are indicated by % and can be initialized with lists like arrays: ...
Rate of Gene Transfer From Mitochondria to Nucleus
Rate of Gene Transfer From Mitochondria to Nucleus

... than in plants, implying a higher transfer rate of animals. The evolution of gene transfer may have been affected by an intensity of intracellular competition among organelle strains and the organelle inheritance system of the organism concerned. This article reveals a relationship between those fac ...
poor homologous synapsis 1 a novel gene required for homologous
poor homologous synapsis 1 a novel gene required for homologous

Complete Thyroxine-Binding Globulin (TBG) Deficiency Produced
Complete Thyroxine-Binding Globulin (TBG) Deficiency Produced

... defects on mRNA processing has often been hindered by the inaccessibility of the mRNA transcripts. Ectopic transcript analysis (illegitimate transcription) is an invaluable tool for the characterization of defects of mRNA splicing, although splicing patterns exhibited by normal and ectopic transcrip ...
Identification of Mga1, a G‐protein α‐subunit gene involved in
Identification of Mga1, a G‐protein α‐subunit gene involved in

... production (Hicks et al., 1997; Yu et al., 2008). While substantial basic knowledge regarding the functional role of G-proteins has been gained from other fungi, especially model filamentous fungi and pathogenic fungi, our understanding of the biological significance of these components in fermentat ...
Cytogenetics
Cytogenetics

... Cytogenetics is a specialized laboratory test involving the study of normal and abnormal chromosomes. Cytogenetics studies are performed on blood, bone marrow, amniotic fluid, and solid tissue specimens. Cells from the specimen are cultured, harvested and banded then viewed under a microscope for nu ...
use of genomic tools to discover the cause of
use of genomic tools to discover the cause of

... I represent that my thesis or dissertation and abstract are my original work. Proper attribution has been given to all outside sources. I understand that I am solely responsible for obtaining any needed copyright permissions. I have obtained needed written permission statement(s) from the owner(s) o ...
genotyping arabidopsis - STLCC.edu :: Users` Server
genotyping arabidopsis - STLCC.edu :: Users` Server

... The Ds element is not the entire story, however. McClintock found that another gene she called “Activator” (Ac) is necessary for the transposition of Ds. Ds is believed to be a mutant transposon, lacking the gene for transposase. Ac carries the transposase gene, and no matter where in the genome it ...
2016‐12‐15 1
2016‐12‐15 1

... What is a DNA molecule?  A piece of double stranded DNA (i.e. a double helix of DNA) What is the difference between a chromosome and a chromatid? A replicated chromosome is made  up of two chromatids which are joined by the centromere. The chromatids separate from each other  during mitosis and is d ...
genomic flux: genome evolution by gene loss and
genomic flux: genome evolution by gene loss and

... this way, one may sort bacterial genes into broad classes that reflect their average importance to the cell (Table 1). Mutations in genes making essential or very important contributions to the cell will be strongly counterselected in bacterial populations, since these mutants cannot compete effecti ...
RNA-Mediated Programming of Developmental
RNA-Mediated Programming of Developmental

... Measured signals were normalized by rehybridizing the membrane with a telomeric oligonucleotide probe, as previously described (7). The reference value of 1 copy per haploid genome (1 cphg) was arbitrarily defined as the average of normalized signals from uninjected control clones of the same experi ...
lecture 1 File
lecture 1 File

Issue #14 November 2011 In This Issue Check Your Mailbox DBAR
Issue #14 November 2011 In This Issue Check Your Mailbox DBAR

... first is that some of the patients harboring these deletions exhibited what is known as mosaicism, suggesting that not every cell analyzed harbors the deletion. Interestingly, there was a correlation between mosiacism and spontaneous remission. One could envision in patients exhibiting such mosaicis ...
Genome Rearrangements Caused by Depletion of Essential DNA
Genome Rearrangements Caused by Depletion of Essential DNA

... cycle following gene-product depletion by promoter shut off (Yu et al. 2006). Spontaneous DNA damage was measured by the relocalization of the DNA damage checkpoint protein Ddc2 from a diffuse nuclear pattern to discrete subnuclear foci (Figure 1A) (Melo et al. 2001; Lisby et al. 2004). Following gr ...
letters
letters

... Next, we probed the functional relationship between EZH2 and DNA methyltransferases. As these proteins act as transcriptional repressors11,12,15, we investigated whether they can silence a common target gene. Recent work has identified several EZH2-target genes, including the MYT1 gene16. We first e ...
Sequences 5` to Translation Start Regulate
Sequences 5` to Translation Start Regulate

... tissue specificity of expression. The extra regions of nucleotide sequence conservation between SSU301 and SSU611 might contribute to the high expression levels of these two genes. Studies that define the c/s-acting elements in 5' promoter regions generally use deletion analysis of the pertinent seq ...
emboj7601802-sup
emboj7601802-sup

... Plasmid patpA2 was digested with SexAI, filled-in with Klenow and relegated on itself to create plasmid patpA2300St. This generated a five bases frame-shift, causing the premature termination of translation 300 residues after the initiation codon. The recycling aadA cassette was then introduced into ...
FEMS Microbiology Ecology
FEMS Microbiology Ecology

... Pyrosequencing libraries were generated by GATC Biotech (Konstanz, Germany) using the Roche 454 GS-FLX+ TitaniumTM sequencing platform. A taxonomy-based analysis was carried out with the web server SNOWMAN 1.11 (http://snowman.genome. tugraz.at). Primer sequences were cropped, and sequences shorter ...
Team Application Activity #3: Statistical Analysis of Microbial
Team Application Activity #3: Statistical Analysis of Microbial

... To calculate alpha diversity, QIIME must first generate alpha rarefaction tables (in biom format). As you know from your readings, rarefaction data will not only provide information regarding the amount of diversity present within each sample, but will also help you determine if you have sampled at ...
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Genomics

Genomics is a discipline in genetics that applies recombinant DNA, DNA sequencing methods, and bioinformatics to sequence, assemble, and analyze the function and structure of genomes (the complete set of DNA within a single cell of an organism). Advances in genomics have triggered a revolution in discovery-based research to understand even the most complex biological systems such as the brain. The field includes efforts to determine the entire DNA sequence of organisms and fine-scale genetic mapping. The field also includes studies of intragenomic phenomena such as heterosis, epistasis, pleiotropy and other interactions between loci and alleles within the genome. In contrast, the investigation of the roles and functions of single genes is a primary focus of molecular biology or genetics and is a common topic of modern medical and biological research. Research of single genes does not fall into the definition of genomics unless the aim of this genetic, pathway, and functional information analysis is to elucidate its effect on, place in, and response to the entire genome's networks.
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