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AP & Regents Biology
AP & Regents Biology

...  Using computers to study primary biological data (genomes, proteins, other databases) students learn biology as a dynamic process of interpreting complex data  students can reproduce current scientific work & ask new questions ...
The MUR1 gene of Arabidopsis thaliana encodes an isoform of GDP
The MUR1 gene of Arabidopsis thaliana encodes an isoform of GDP

... EST (clone 90A12T7) that showed high sequence similarity to putative bacterial GDP-D-mannose-4,6-dehydratases was identified in the database of ESTs (dbEST; ref. 20). This clone was provided by the Arabidopsis Biological Resource Center, and its entire nucleotide sequence was determined. Sequence co ...
Student Name: Teacher
Student Name: Teacher

... Description: ...
Chap2 DNA RNA and Protein
Chap2 DNA RNA and Protein

... In mammals, the methylation of DNA occurs at the cytosine bases in CpG dinucleotide via the methyltransferase [1]. A high CpG content is found in regions known as CpG islands (a stretch of DNA 1-2 kb that has clusters of CpG doublets). CpG islands surround the promoters of constitutively expressed ...
PowerPoint 演示文稿
PowerPoint 演示文稿

... few base pairs Polymerase chain reaction (PCR) a method used to amplify a specific DNA sequence in vitro by repeated cycles of synthesis using specific primers and DNA polymerase Recombination the process by which parts or all of the DNA molecules from two separate sources are exchanged or brought t ...
The Genetics of Viruses and Prokaryotes The Genetics of Viruses
The Genetics of Viruses and Prokaryotes The Genetics of Viruses

... enveloped, by their genetic material, and by their host range. • Some viruses have a lipid membrane derived from host membranes, which determines if they are enveloped or naked. • They have a nucleic acid genome, that can be DS or SS, RNA or DNA. • The host range can be at the level of cells, tissue ...
apbio ch 17 test
apbio ch 17 test

... 5) A possible sequence of nucleotides in the template strand of DNA that would code for the polypeptide sequence phe-leu-ile-val would be A) 5' TTG-CTA-CAG-TAG 3'. B) 3' AAC-GAC-GUC-AUA 5'. C) 5' AUG-CTG-CAG-TAT 3'. D) 3' AAA-AAT-ATA-ACA 5'. E) 3' AAA-GAA-TAA-CAA 5'. 6) The genetic code is essential ...
FISH
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... FISH for Detection of Single to Multiple Genetic Events ...
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... Welcome to Phage sequences in bacterial genomes Searching for PCR primers Thursday, 23 June 2005 • Meghan Feltcher presents: Molecular genetics of SaPI1… • James Kokorelis presents: Diversity and host range… • Available tools to find primers in EDL933 • Strategy to find primers • Do it ...
Cell Division Mitosis vs. Meiosis - kromko
Cell Division Mitosis vs. Meiosis - kromko

... tRNA-binding site, called the A site, is vacant and ready for the next amino-acidbearing tRNA molecule. Important Note: Each amino acid is joined the correct tRNA molecule by a specific enzyme. This process requires energy in the form of ATP. 2.) Elongation: Amino acids are added to the growing poly ...
Construction and stable transformation of Tetrahymena
Construction and stable transformation of Tetrahymena

... Construction and stable transformation of Tetrahymena macronuclear artificial chromosome (TtAC) for a large gene/DNA cloning and expression system Ayça Fulya Üstüntanır and Muhittin Arslanyolu Graduate School of Sciences, Biology Program, Anadolu University, Eskisehir, Turkey Department of Biology, ...
Mutations in the parkin gene cause autosomal
Mutations in the parkin gene cause autosomal

... (lodged under accession number AB009973 in the DDBJ database). The parkin gene consists of 12 exons, with exon 7 corresponding to the putative exon J-17 obtained by the initial exon trapping. Based on these data, we designed 14 sets of PCR primers to amplify each of 12 exons and determined the size ...
DNA in culture media Conflict of interest?
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... used to: – Rank embryos according to their implantation potential? • ”PGS” ...
Exercises Biological databases PART
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Select one of your Biology instructors from another class and look
Select one of your Biology instructors from another class and look

... these cereal grasses are highly sterile and have many characteristics intermediate between the parental species. How many chromosomes do the hybrids possess? 3.2 The diagrams shown here depict anaphase in cell division in a cell of a hypothetical organism with two pairs of chromosomes. Identify the ...
Using Molecular Markers in Plant Genetics
Using Molecular Markers in Plant Genetics

Cloning of the mouse BTG3 gene and definition of a new
Cloning of the mouse BTG3 gene and definition of a new

... Human chromosome localization of the BTG3 gene was determined by Southern blot analysis of a human × rodent cell hybrid DNA panel purchased from BIOS laboratories (Newhaven, CT, USA) with a mouse BTG3 ORF probe. Results Several recombinant phage clones containing inserts different from BTG1 and TIS2 ...
PPT - BeeSpace - University of Illinois at Urbana
PPT - BeeSpace - University of Illinois at Urbana

... Partition with Medical Subject Headings (MeSH) Community is all abstracts classified by core term  40M abstracts containing 280M concepts  computation is 2 days on NCSA Origin 2000 Simulating World of Medical Communities  10K repositories with > 1K abstracts  (1K with > 10K) ...
An example of HDLSS: Microarray data
An example of HDLSS: Microarray data

... samples to the Microarray. Once the cDNA probes have been hybridized to the array and any loose probe has been washed off, the array must be scanned to determine how much of each probe is bound to each spot. ...
Supplemental Figures
Supplemental Figures

... number EU072424), and five tomato (Solanum lycopersicum) ERFs (1g090300, 1g090310, 1g090320, 1g090340, and 1g090370) that are clustered on chromosome I. Tobacco sequences can be found in the database of tobacco transcription factors (TOBFAC) (Rushton et al., 2008) under the same names. Residues iden ...
Biology for Bioinformatics - NIU Department of Biological
Biology for Bioinformatics - NIU Department of Biological

... – One characteristic of genomes is their GC content: the percentage of G and C. This can vary between from about 20% to 70%. Eukaryotes generally have GC contents around 40%. Also, there are large scale variations in GC content along the length of chromosomes called “isochores”, which may be the res ...
Biology for Bioinformatics
Biology for Bioinformatics

... – One characteristic of genomes is their GC content: the percentage of G and C. This can vary between from about 20% to 70%. Eukaryotes generally have GC contents around 40%. Also, there are large scale variations in GC content along the length of chromosomes called “isochores”, which may be the res ...
PAT
PAT

... binding motif etc. – Structure is more conserved than sequence during evolution, therefore protein sequences can have similar structures even without clearly detected sequence similarity. It means that we have bigger chance to find the function relationship from structure similarity than from sequen ...
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... mice are mice that have had foreign genes incorporated into their DNA. The result of the foreign DNA is an overactive gene. In this study, the mice were transgenic for MIP-2. My litter had a mom with no foreign MIP-2 added, and a dad that had foreign MIP-2 genes added. In order to see each gene’s ef ...
Note: all of these sentences are true.
Note: all of these sentences are true.

... 19.Replication of dsDNA is bidirectional. 20.DNA replication occurs in the S phase of the cell cycle. 21.Dna A protein initiates unwinding of DNA. 22.DNA helicases: require energy (ATP) for unwinding or separate the DNA. 23.Single-stranded DNA-binding (SSB) proteins has two functions,1. Keep the tw ...
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Genomics

Genomics is a discipline in genetics that applies recombinant DNA, DNA sequencing methods, and bioinformatics to sequence, assemble, and analyze the function and structure of genomes (the complete set of DNA within a single cell of an organism). Advances in genomics have triggered a revolution in discovery-based research to understand even the most complex biological systems such as the brain. The field includes efforts to determine the entire DNA sequence of organisms and fine-scale genetic mapping. The field also includes studies of intragenomic phenomena such as heterosis, epistasis, pleiotropy and other interactions between loci and alleles within the genome. In contrast, the investigation of the roles and functions of single genes is a primary focus of molecular biology or genetics and is a common topic of modern medical and biological research. Research of single genes does not fall into the definition of genomics unless the aim of this genetic, pathway, and functional information analysis is to elucidate its effect on, place in, and response to the entire genome's networks.
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