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Transparent DNA/RNA Co-extraction Workflow Protocol Suitable for
Transparent DNA/RNA Co-extraction Workflow Protocol Suitable for

... Adequate comparisons of DNA and cDNA libraries from complex environments require methods for co-extraction of DNA and RNA due to the inherent heterogeneity of such samples, or risk bias caused by variations in lysis and extraction efficiencies. Still, there are few methods and kits allowing simultan ...
HLA-A, -B
HLA-A, -B

... A*0101, *0301, Cw*0701,*0702, B*0702,*0801, DRB1*0301,*1501, DQA1*0501,*0102, DQB1*0201,*0602 composed from 2 haplotypes from the parents: A*0101 : Cw*0701 : B*0801 : DRB1*0301 : DQA1*0501 : DQB1*0201 (by serotyping A1-Cw7-B8-DR3-DQ2) A*0301 : Cw*0702 : B*0702 : DRB1*1501 : DQA1*0102 : DQB1*0602 (by ...
A novel locus of Yersinia enterocolitica serotype O:3 involved in
A novel locus of Yersinia enterocolitica serotype O:3 involved in

... clones were isolated from the library. In the second approach, a modified ligation-polymerase chain reaction (PCR) method (Rich and Willis, 1990) was used as described in the Experimental procedures. The purified ligation-PCR fragments were used as probes to screen 15 positive clones obtained earlie ...
An accessible database for mouse and human whole transcriptome
An accessible database for mouse and human whole transcriptome

... Downloaded from http://bioinformatics.oxfordjournals.org/ at Weizmann Institute of Science on April 27, 2013 ...
Sex differences in the genome-wide DNA
Sex differences in the genome-wide DNA

... the autosomes [9]. Many of these studies have only analyzed a limited number of genes and gene regions, such as the promoter region, and have not performed genome-wide analyses of DNA methylation. In addition, sex-specific differences in DNA methylation levels have, to our knowledge, not yet been st ...
Genetic and Molecular Diagnostics – Next Generation Sequencing
Genetic and Molecular Diagnostics – Next Generation Sequencing

... these genes will result in an entire panel to be denied. These excluded genes are listed in Table 2. ii. Unless indicated otherwise, genetic testing panels which include any of the gene components in Table 2 are denied as statutorily excluded and not medically necessary tests under the MolDX Program ...
ppt - Chair of Computational Biology
ppt - Chair of Computational Biology

... Most choices of rearrangements quickly lead to hard algorithmic problems. Therefore, the set of operations is usually restricted to reversals, translocations, fusions or fissions where linear-time algorithms were developed in the last years. However, this choice of rearrangement operations is more d ...
SuperGen`s Novel Hypomethylating Agent Highlighted at American
SuperGen`s Novel Hypomethylating Agent Highlighted at American

... "These important animal studies which incorporate a validated biomarker for hypomethylating activity support further clinical development of S110," said James Manuso, Ph.D., President and CEO of SuperGen. "We plan to introduce this nextgeneration hypomethylating agent into the clinic next year." The ...
- Philsci-Archive
- Philsci-Archive

... specifically, the features under discussion (non-contingency, specificity etc.) are not infrequently treated (e.g., in Susser, 1977) as conditions that can be used to distinguish between causal and non-causal relationships, rather than (as I would urge) features that should be used to distinguish am ...
DNA-mediated transformation of the filamentous fungusAspergillus
DNA-mediated transformation of the filamentous fungusAspergillus

... an overview see Portugal and Cohen 1977) have established the process of genetic transformation as a method to transfer genetic information, at first only among bacteria. The first evidence for genetic transformation in eukaryotic organisms was provided by McBride and Ozer (1973). From that time on ...
A new heavy lanthanide-dependent DNAzyme
A new heavy lanthanide-dependent DNAzyme

... substitution at the cleavage junction completely inhibits the activity, which cannot be rescued by Cd2+ alone, or by a mixture of Er3+ and Cd2+ , suggesting that two interacting metal ions are involved in direct bonding to both non-bridging oxygen atoms. A new model involving three lanthanide ions i ...
Recombinant Materials Form
Recombinant Materials Form

... that are chemically or by other means synthesized or amplified, including those that are chemically or otherwise modified but can base pair with naturally occurring nucleic acid molecules, or (iii) molecules that result from the replication of those described in (i) or (ii) above. 1. Goal of the pro ...
O4 M.A. Rouf Mian
O4 M.A. Rouf Mian

... in the USA. The Soybean aphid (SA) (Aphis glycines Matsumura) was first reported in the northern soybean growing region of the USA in 2000. By 2004, 80% of the U.S. soybean field was infested by SA. The SA is native to southeastern and eastern Asia and it is long been a pest of soybean in many Asian ...
supporting information
supporting information

... 9x20 matrix in which every entry is a number quantifying the preference of a given amino acid (20 possibilities) to be placed in a given position along the bound peptide (9 possibilities). A 9x20 binding preference matrix was also constructed for this molecule. The binding matrices were used in a co ...
345 - Timstar
345 - Timstar

... Studies show that there is an inherited component that effects how people taste PTC. In 2003, more than 70 years after its original discovery, the gene responsible for PTC sensitivity, TAS2R38, was identified. Analysis of SNPs within the coding region of TAS2R38 revealed that PTC taster and nontaste ...
Genetics and Genomics
Genetics and Genomics

... 1.1. DNA methylation ................................................................................................... 1.2. CpG as mutation hot spot ...................................................................................... 1.3. Histone modifications ................................... ...
Correlation of ABCA4 polymorphisms with age
Correlation of ABCA4 polymorphisms with age

... (ABCA4) gene polymorphisms (rs560426 and 6389T>A) with the occurrence of age-related macular degeneration (AMD). Methods: Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) was used to detect the genotypes of rs560426 and 6389T>A polymorphisms in 110 AMD patients and 125 h ...
Intelligent Icons: Integrating Lite-Weight Data Mining
Intelligent Icons: Integrating Lite-Weight Data Mining

... approach captures the correct relationship between the three species. An additional limitation of VisualIDs is that most people do not explicitly name the vast majority of files on their hard drive. Rather the file names are inherited when the files are downloaded, or they are automatically named by ...
(Non)Obviousness of Claims to Genetic Sequences: Finding the
(Non)Obviousness of Claims to Genetic Sequences: Finding the

... deoxyribose, phosphate, and one of four bases, adenine (A), guanine (G), thymine (T), and Cytosine (C).' 6 The two chains are held together by complementary base pairing, so that A always binds with T, and G always binds with C.'" Genes are segments of DNA that carry genetic information. To greatly ...
PPTX - Bioinformatics.ca
PPTX - Bioinformatics.ca

(type I) and mannose-resistant F8 (P) fimbriae of Escherichia coli
(type I) and mannose-resistant F8 (P) fimbriae of Escherichia coli

... information on the order of the gene loci in question. The order fei-gal-proC seems to be the most probable one because no quadruple cross-over would be required among the 227 hybrids tested here. Considered together with the results in Table 2 we suggest that the gene order is p y r D - f e i gal-p ...
1: Summary and Options
1: Summary and Options

... experiments are useful in manipulating various aspects of the mutagenic process, for example, to examine how mutagens act on DNA and to study effects of varying doses and rates of exposure to mutagenic agents administered either singly or in combination. Experimentation with animals is essential for ...
Fig. 1 - Repositorio Académico
Fig. 1 - Repositorio Académico

... among them we identified gene CG6234 and showed that it is specifically expressed along the dorsal midline of the early embryo and in the differentiated amnioserosa. Using an RNA interference knockdown strategy, we provided evidence that CG6234 gene product is required during germ-band retraction, a p ...
Unit 30C Cell Division, Genetics, and Molecular
Unit 30C Cell Division, Genetics, and Molecular

... parents. Sexually reproducing organisms exchange genetic information, so that the offspring have a unique combination of traits. The genetic material determines the proteins that make up cells, which ultimately give rise to physical traits. Daphnia (Figure 1, next page) is a truly remarkable animal. ...
letters - Centre for Social Evolution
letters - Centre for Social Evolution

... sex-determining function by RNAi knockdown experiments. Only csd and the new fem gene, located 12 kb upstream of csd, have sex determination function (Fig. 1b). RNAi-induced knockdowns of fem in females result in a developmental switch to entire male head differentiation (Fig. 1b), whereas knockdown ...
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Helitron (biology)

A helitron is a transposon found in eukaryotes that is thought to replicate by a so-called ""rolling-circle"" mechanism. This category of transposons was discovered by Vladimir Kapitonov and Jerzy Jurka in 2001. The rolling-circle process begins with a break being made at the terminus of a single strand of the helitron DNA. Transposase then sits at this break and at another break where the helitron targets as a migration site. The strand is then displaced from its original location at the site of the break and attached to the target break, forming a circlular heteroduplex. This heteroduplex is then resolved into a flat piece of DNA via replication. During the rolling-circle process, DNA can be replicated beyond the initial helitron sequence, resulting in the flanking regions of DNA being ""captured"" by the helitron as it moves to a new location.
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