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Chapter 4
Chapter 4

... The process of DNA replication • The DNA strands separate (the bonds between the two bases that make up each rung separate) – like “unzipping.” • New bases attach to each strand. • Two identical DNA molecules are formed (each with one strand of old DNA and one strand of new DNA). ...
Federal Agency for Social Development
Federal Agency for Social Development

... The sum total of the gens that make up genetic apparatus of a cell (genome) establishes its genotype, which is the hereditary constitution of the cell that is transmitted to its progeny. The genotype includes the complete genetic potential of the cell, all of which may or may not be expressed in a g ...
Gene expression: Microarray data analysis
Gene expression: Microarray data analysis

Reduction in DNA Binding Activity of the Transcription Factor Pax
Reduction in DNA Binding Activity of the Transcription Factor Pax

... because the C-terminal region, which in Pax-5a contains the transactivation, repression, and partial homeodomain homology regions, has been replaced by a novel sequence with unknown function (30). Based on the absence of a transactivating domain, we hypothesize that Pax-5d may have a regulatory func ...
Hyper-eccentric structural genes in the mitochondrial genome of the
Hyper-eccentric structural genes in the mitochondrial genome of the

... structural genes still remain to be understood. Since the gene fragmentation pattern is generally conserved among the diplonemid species studied to date, it was considered that their structural complexity has plateaued and further gene fragmentation could not occur. Here, we show the mitochondrial g ...
Slide 1
Slide 1

... Vast number of Google/Yahoo users, satisfied Huge Demand for specialized tools for TM in Bio-Medical Domains Small number of users, unsatisfied The current TM tools, though successful in some business applications, do not meet requirements of users in bio-medical domains. More publicity and marketin ...
Genes
Genes

... Gene Expressivity—If the Protein Is Made, Does It Change a Person’s Phenotype? • No: it is recessive • Yes: it is dominant • Sometimes: it has intermediate penetrance ...
The RNA world meets behavior: AfiI pre
The RNA world meets behavior: AfiI pre

... which a coding position is modified within messages. Certain pre-mRNA editing sites vary greatly in the frequency with which their editing is detected in vivo, ranging from a few percent to nearly 100%. Thus, editing introduces levels of expression intermediate to the usual genetic variation (i.e. 0 ...
Gene Section PLCB1 (phospholipase C, beta 1 (phosphoinositide-specific)) Atlas of Genetics and Cytogenetics
Gene Section PLCB1 (phospholipase C, beta 1 (phosphoinositide-specific)) Atlas of Genetics and Cytogenetics

... expression: higher signal intensities were observed in some CNS areas, such as the amygdala, caudate nucleus, and hippocampus, and PLCB1a appeared to be expressed at slightly higher levels in most tissues. PCR analysis of embryonic and adult rat tissues indicated restricted expression of both isofor ...
Educational Item Section Architecture of the chromatin in the interphase Nucleus
Educational Item Section Architecture of the chromatin in the interphase Nucleus

... the genome of the cytoplasm but it plays an essential role probably in the chromatin organization and the gene expression control. Within this organelle, the genome is arranged on a none random way; each chromosome is occupying a well defined territory and it is globally maintained in place by conta ...
Efficient expression of ribozyme and reduction of stromelysin mRNA
Efficient expression of ribozyme and reduction of stromelysin mRNA

... of stromelysin upon stimulation (Brinckerhoff and Auble, 1990). In addition, there is a significant up-regulation of stromelysin and other MMPs in articular tissues from patients with osteo- or rheumatoid arthritis (Hembry et al., 1995) (Okada et al., 1992). Thus targeted inhibition of one or more o ...
Dysregulation of intestinal crypt cell proliferation and villus cell
Dysregulation of intestinal crypt cell proliferation and villus cell

... fingers (2, 12, 38). There are 25 SP/KLF genes/proteins known at present. SP/KLF proteins bind to GC/GT boxes (consensus binding site: 5⬘-NGGGNGNGG-3⬘) resident in promoter and enhancer/silencer regions of multiple chromosomal genes (38). Although each SP/KLF family member is homologous to all other ...
Mitochondrial inheritance - Centre for Genetics Education
Mitochondrial inheritance - Centre for Genetics Education

P-Element Transformation with period Locus DNA Restores
P-Element Transformation with period Locus DNA Restores

... Biological rhythms are ubiquitous and have been intensively studied at many levels. Yet almost nothing is known about the molecular nature of the “clocks” underlying such rhythms. The isolation of mutations that perturb or abolish rhythms (reviewed by Feldman, 1982) has allowed molecular analyses of ...
Suppl. Material
Suppl. Material

... Construction of mutants using pJET1.2/blunt cloning vector Insertion mutation was carried out in kdsA and waaG genes of the lipopolysaccharide biosynthesis (LPS) pathway of P.aeruginosa PAO1. Internal fragments of both kdsA and waaG genes were used to construct the recombinant plasmids using CloneJE ...
Teacher Background on Epigenetics 2013
Teacher Background on Epigenetics 2013

... Epigenetics works by ‘tagging’ or making punctuation changes to our DNA. Two of the best known mechanisms are:  Histone acetylation -- DNA is wound around chemical spools called histones. This saves space in the cell, but tightly wrapped DNA can't be read for gene expression. Chemical triggers can ...
HST.161 Molecular Biology and Genetics in Modern Medicine
HST.161 Molecular Biology and Genetics in Modern Medicine

... double stranded, A is always opposite T and G is always opposite C. The hydrogen bonds formed by these base pairs cause the double stranded structure to be more stable than the separated single strands. Information is encoded by the order of the nucleotide building blocks in the linear DNA polymer. ...
Genetic Engineering
Genetic Engineering

... Using sticky ends to add DNA to a bacterial plasmid ...
to get the file - Chair of Computational Biology
to get the file - Chair of Computational Biology

... Essential elements of biological clocks Our biological clocks contain three essential elements: - a central oscillator that keeps time; - the ability to sense time cues in the environment and to reset the clock as the seasons change; and - a series of outputs tied to distinct phases of the oscillat ...
Activity 19.4, DNA Sequencing
Activity 19.4, DNA Sequencing

... “DNA Sequencing is a laboratory method of determining the nucleotide sequence of a DNA fragment. The most popular method, sometimes called dideoxysequencing, was worked out by Frederick Sanger in 1974, and so is also called Sanger sequencing. The method utilizes DNA polymerase in vitro to perform a ...
printer-friendly version of benchmark
printer-friendly version of benchmark

... http://www.wisc-online.com/objects/index_tj.asp?objID=AP1302 For information on how mutations affect the expression of DNA, see MS TIPS Benchmark L.8.A.2 ...
Expression of Xenopus T-box transcription factor, Tbx2 in Xenopus
Expression of Xenopus T-box transcription factor, Tbx2 in Xenopus

et al.
et al.

... When gene manipulation in fungi first became possible, there were many unsuccessful attempts to express heterologous genes from bacteria or higher eukaryotes. This suggested that fungal promoters have a unique structure, a feature first shown for S. cerevisiae (Guarente 1987). Four structural elemen ...
First mutation in the red blood cell-specific
First mutation in the red blood cell-specific

... Utrecht), in a patient previously diagnosed with HK deficiency. To our knowledge, these three patients are the only ones in which the molecular basis has been studied. In all three cases mutations were located in that part of the gene that encodes both HK-R and HK-1. The erythroid-specific promoter ...
Beyond Co-expression: Gene Network Inference
Beyond Co-expression: Gene Network Inference

... concert with other TF’s.  Synergistic effects • Clustering: – a motif may occur in more than one cluster, because it may give rise to different expression patterns depending on its interaction partners. – several motifs may occur in the same cluster. ...
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Primary transcript



A primary transcript is the single-stranded ribonucleic acid (RNA) product synthesized by transcription of DNA, and processed to yield various mature RNA products such as mRNAs, tRNAs, and rRNAs. The primary transcripts designated to be mRNAs are modified in preparation for translation. For example, a precursor messenger RNA (pre-mRNA) is a type of primary transcript that becomes a messenger RNA (mRNA) after processing.There are several steps contributing to the production of primary transcripts. All these steps involve a series of interactions to initiate and complete the transcription of DNA in the nucleus of eukaryotes. Certain factors play key roles in the activation and inhibition of transcription, where they regulate primary transcript production. Transcription produces primary transcripts that are further modified by several processes. These processes include the 5' cap, 3'-polyadenylation, and alternative splicing. In particular, alternative splicing directly contributes to the diversity of mRNA found in cells. The modifications of primary transcripts have been further studied in research seeking greater knowledge of the role and significance of these transcripts. Experimental studies based on molecular changes to primary transcripts the processes before and after transcription have led to greater understanding of diseases involving primary transcripts.
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