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Analysis of Transcription Activation Distance as a Polygenic Trait in
Analysis of Transcription Activation Distance as a Polygenic Trait in

... regulation of gene expression. Work over the past few decades has provided vast insight into the proteins and mechanisms governing this step. In eukaryotes, most fundamental aspects of transcription initiation are conserved from yeast to humans. This conservation, as well as the ability to perform h ...
Ectopic induction and reorganization of Wnt-1
Ectopic induction and reorganization of Wnt-1

... 1985). The sequences are 84% identical at the nucleotide level, and 92% at the protein level. As expected, this homology is slightly higher than that observed between the mouse and Xenopus (Noordermeer et al., 1989) or between the mouse and zebrafish (Molven et al., 1991) sequences. Most of the amin ...
Time-Resolved Transcriptome Analysis of Bacillus subtilis
Time-Resolved Transcriptome Analysis of Bacillus subtilis

... subtilis gene expression patterns in response to amino acid mixtures availability have been performed by proteomics and transcriptomics [15]. In these studies, Casamino Acid (CAA), a mixture of amino acids and oligopeptides and constitutes a rich nitrogen source, were used. The products of CAA-regul ...
study of gene effects for boll number, boll weight, and seed index in
study of gene effects for boll number, boll weight, and seed index in

... revealed the presence of dominance, while the Wr-Vr for F1 also highly significant, and this significance was the result of the presence of non-allelic interactions thus invalidate the additive dominance model and did not permit for further analysis of diallel data. While in F2 generation, the non-sig ...
Evolutionary Potential and Requirements for Minimal Protocells
Evolutionary Potential and Requirements for Minimal Protocells

... A general point about definitions is that they cannot be falsified. They have to be internally consistent, of course, but there can be an arbitrary number of such definitions for life, for example. It is the use of the alternative definitions that makes the difference: some definitions are found helpful ...
Polymorphism of FecB Gene in Nine Sheep Breeds or Strains and
Polymorphism of FecB Gene in Nine Sheep Breeds or Strains and

... polymorphism (RFLP) approach based on the reports described by Souza et al. [2] and Davis et al [5]. In recent years, many aspects of the FecB gene, ...
Chapter 5 Gases - Saint Demetrios Astoria School
Chapter 5 Gases - Saint Demetrios Astoria School

... information about the dominance relationship between the alleles ...
Marker Saturation and Construction of a High
Marker Saturation and Construction of a High

... appropriate temperature, 90 s amplification reactions at 72 oC and 5 min extension at 72 ...
A possible association between panic disorder
A possible association between panic disorder

... disorders (Kindler et al., 2011), but none of these studies showed any significant associations between this polymorphism and the trait studied. The results regarding obesity and this polymorphism are inconclusive. One study found no association between rs4684677 and obesity (Larsen et al., 2005), wh ...
controversy and its implications Genetic hitchhiking versus
controversy and its implications Genetic hitchhiking versus

... distinguishing BGS and hitchhiking was a major activity in those years (until about 2000). An important question has been whether BGS alone can account for the patterns of variation we observe, or whether positive selection also needs to be invoked. Although numerous attempts have been made, the con ...
Automatic identification of topic boundaries in
Automatic identification of topic boundaries in

... Protein Cleavage site analysis: Specific signals present in the polypeptide chains are responsible for transport and sorting of proteins to their appropriate destination. In 1999 Blobel discovered that “proteins have intrinsic signals that govern transport and localization in the cell” (Blobel 1999) ...
controversy and its implications Genetic hitchhiking versus
controversy and its implications Genetic hitchhiking versus

... distinguishing BGS and hitchhiking was a major activity in those years (until about 2000). An important question has been whether BGS alone can account for the patterns of variation we observe, or whether positive selection also needs to be invoked. Although numerous attempts have been made, the con ...
Thesis-1962R-S215s
Thesis-1962R-S215s

... Many efforts were made to see the genes within the chromosomes. As earl;y as 1881, Balbiani in Italy pointed out the giant chromosomes in the salivary glands of certain flies. ...


... most closely related to ATR and the DNA-PK catalytic subunit. ...
Set - people.vcu.edu
Set - people.vcu.edu

... • The interface facilitates operations on sets of genes and sequences • The interface puts at your disposal powerful tools (that already exist), without the need to figure out a different computer environment • Taken together, these capabilities make possible a focus by those not particularly adept ...
Study of seven single-nucleotide polymorphisms identified in East
Study of seven single-nucleotide polymorphisms identified in East

... a growing number of studies are now being performed in populations of non-European ancestry. However, there have been relatively limited studies on SNPs in obesity-related genes within the Taiwanese population.22–27 We systematically reviewed PubMed-indexed studies for obesity-associated loci identi ...
Gene Section CASP8 (Caspase 8, Apoptosis-Related Cysteine Peptidase) Atlas of Genetics and Cytogenetics
Gene Section CASP8 (Caspase 8, Apoptosis-Related Cysteine Peptidase) Atlas of Genetics and Cytogenetics

... development was monitored. Although presence or lack of caspase-8 did not change primary tumor growth, metastasis was highly promoted in the tumors lacking caspase-8 due to impaired programmed cell death (Stupack et al., 2006). In a similar study, tumor cells additionally lacking caspase-3 were used ...
Chapter 6
Chapter 6

... Protostome animals, such as insects, snails and worms, seem to be organized up-side down when compared to deuterostomes, such as vertebrates. If this is true, then their respective ventrally (belly-side) and dorsally (back-side) located nervous system are homologous (inherited from a common ancestor ...
IgG4+ clones are dominantly present in the B
IgG4+ clones are dominantly present in the B

... found in tissue, a substantial number of these were not among the most dominant clones in tissue or could not be retrieved at all. When dividing these clones in IgG4+ and IgG4-, we observed that IgG4+ clones are among the highest ranked clones, while clones with another isotype than IgG4 were only f ...
USB® Thermo Sequenase Cycle Sequencing Kit
USB® Thermo Sequenase Cycle Sequencing Kit

... This kit and all enclosed reagents should be stored frozen at -20°C (NOT in a frostfree freezer). Keep all reagents on ice when removed from storage for use. The kit can conveniently be stored at +4°C for periods of up to 3 months with no loss of performance, but this should be avoided if it is expe ...
Extensions and Modifications of Basic Principles
Extensions and Modifications of Basic Principles

... express both the M and the N antigens; they have blood type MN. The differences between dominance, incomplete dominance, and codominance are summarized in Table 5.1. The type of dominance that a character exhibits frequently depends on the level of the phenotype examined. An example is cystic fibros ...
Molecular subtypes.
Molecular subtypes.

... predominates the normal tissue [7]. According to Perou and Sorlie et al. [1-3], this subtype concerns to ER negative carcinomas, however there are opposite data that classify it to the group of ER positive tumors [7, 25]. With a rate of 1015%, these tumors express CD36, alcohol dehydrogenase, lipop ...
Isolation, cloning and sequence analysis of the lactate
Isolation, cloning and sequence analysis of the lactate

... has been recently reported for the first time in the literature (Mhadhbi et al. 2010) and this has very recently been followed by a new case (Sharifiyazdi et al. 2012). The first study was conducted in a farm located in Tunisia. Four out of seven cattle showing symptoms of acute tropical theileriosi ...
fourth quarter atlas analysis
fourth quarter atlas analysis

... • However, peak area should be larger pieces in a small segment of the peak area More than 70%. That is the same different loci alleles The peak area of difference should be within 30%. • If the two alleles of peak height difference is more than 70%, you will need to consider may ...
Applications of Genome Rearrangements
Applications of Genome Rearrangements

... How do we measure their similarity and/or distance with respect to gene order and gene content? Sub-problem: How do we know that two genes or blocks are the "same" in two different species? ...
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RNA-Seq



RNA-seq (RNA sequencing), also called whole transcriptome shotgun sequencing (WTSS), is a technology that uses the capabilities of next-generation sequencing to reveal a snapshot of RNA presence and quantity from a genome at a given moment in time.
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