
Evolution of an ancient protein function involved in
... neuroblasts, but it plays a similar role in birds and mammals (Saadaoui et al., 2014) and in other cell types, such as several kinds of epithelium (Nakajima et al., 2013; Saadaoui et al., 2014; Bergstralh et al., 2013; Bell et al., 2015). In this complex, the scaffold is the GK protein interaction d ...
... neuroblasts, but it plays a similar role in birds and mammals (Saadaoui et al., 2014) and in other cell types, such as several kinds of epithelium (Nakajima et al., 2013; Saadaoui et al., 2014; Bergstralh et al., 2013; Bell et al., 2015). In this complex, the scaffold is the GK protein interaction d ...
origins debate intro
... different hypotheses. Each team will have 10 minutes to present and instruct the other team. At the end of this section, the entire working group should fully understand the differences between the Replication-First and Metabolism-First hypotheses. Listen carefully, ask questions, and take good note ...
... different hypotheses. Each team will have 10 minutes to present and instruct the other team. At the end of this section, the entire working group should fully understand the differences between the Replication-First and Metabolism-First hypotheses. Listen carefully, ask questions, and take good note ...
22. pyruvate oxidation and citric acid cycle
... Kurt Henseleit at the University of Freiburg. In 1933, he emigrated to England to the University of Cambridge. Later, he moved to the University of Shefield, where he worked out a major part of the citric acid cycle using mainly the pigeon breast muscles, a very actively respiring tissue. In 1954, h ...
... Kurt Henseleit at the University of Freiburg. In 1933, he emigrated to England to the University of Cambridge. Later, he moved to the University of Shefield, where he worked out a major part of the citric acid cycle using mainly the pigeon breast muscles, a very actively respiring tissue. In 1954, h ...
A new natural product-based hybrid
... frequently reported is the framework combination strategy. In this approach, two separate pharmacophores that inhibit different targets are synthetically linked or merged into a single molecule (7, 8). The major complexity that is involved in the design of multiple ligands lies in balancing both dru ...
... frequently reported is the framework combination strategy. In this approach, two separate pharmacophores that inhibit different targets are synthetically linked or merged into a single molecule (7, 8). The major complexity that is involved in the design of multiple ligands lies in balancing both dru ...
Document
... proteinases. Sequence analysis revealed that the pregnancy-associated glycoproteins (PAGs) most closely resemble pepsin (49% to 59% identity). Most PAGs are unable to act as enzymes because of similar amino acid substitutions in the canonical triads and the flap region close to those found in Bla g ...
... proteinases. Sequence analysis revealed that the pregnancy-associated glycoproteins (PAGs) most closely resemble pepsin (49% to 59% identity). Most PAGs are unable to act as enzymes because of similar amino acid substitutions in the canonical triads and the flap region close to those found in Bla g ...
The RAGNYA fold: a novel fold with multiple topological variants
... for a biochemically diverse set of interactions with nucleic acids. Some notable examples of such folds are the RNA recognition motif (RRM)-like fold, double c-beta barrel (and the related EI barrel), b-grasp, S5-like fold, HhH (helix-hairpin-helix) and HTH (helix-turn-helix) [for further details se ...
... for a biochemically diverse set of interactions with nucleic acids. Some notable examples of such folds are the RNA recognition motif (RRM)-like fold, double c-beta barrel (and the related EI barrel), b-grasp, S5-like fold, HhH (helix-hairpin-helix) and HTH (helix-turn-helix) [for further details se ...
CHAPTER 6
... dihydrolipoyl dehydrogenase (DLD). (i) 24 dihydrolipoyl transacetylase subunits form a cubic core structure. (ii) 24 αβ dimers of pyruvate dehydrogenase are added to the cube (two per edge). (iii) Addition of 12 dihydrolipoyl dehydrogenase subunits (two per face) completes the complex. ...
... dihydrolipoyl dehydrogenase (DLD). (i) 24 dihydrolipoyl transacetylase subunits form a cubic core structure. (ii) 24 αβ dimers of pyruvate dehydrogenase are added to the cube (two per edge). (iii) Addition of 12 dihydrolipoyl dehydrogenase subunits (two per face) completes the complex. ...
What Is the Chemical Logic of the TCA Cycle?
... bacteria & plants), inhibited by aspartate • Pyruvate carboxylase - converts pyruvate to oxaloacetate (in animals), is activated by acetylCoA • Malic enzyme converts pyruvate into malate • PEP carboxykinase - could have been an anaplerotic reaction. CO2 binds weakly to the enzyme, but oxaloacetate b ...
... bacteria & plants), inhibited by aspartate • Pyruvate carboxylase - converts pyruvate to oxaloacetate (in animals), is activated by acetylCoA • Malic enzyme converts pyruvate into malate • PEP carboxykinase - could have been an anaplerotic reaction. CO2 binds weakly to the enzyme, but oxaloacetate b ...
Physiological characterisation of plants with - diss.fu
... determination on six individual plants per line; an asterisk indicates values that were determined by the t test to be significantly different (P< 0.05) from the wild type. Wild type, black bar; AL18 light grey bar; RL40, dark grey bar; RL25, white bar. C, Photograph of representative flowers and fr ...
... determination on six individual plants per line; an asterisk indicates values that were determined by the t test to be significantly different (P< 0.05) from the wild type. Wild type, black bar; AL18 light grey bar; RL40, dark grey bar; RL25, white bar. C, Photograph of representative flowers and fr ...
PDH02 - OSU Biochemistry and Molecular Biology
... Remarkable progress in understanding the function and mechanism of action of the keto acid dehydrogenases has been made in the last 50 years. These complexes are the classical example of a multienzyme complexes. A conference on "-Keto Acid Dehydrogenase Complexes: Organization, Regulation, and Bi ...
... Remarkable progress in understanding the function and mechanism of action of the keto acid dehydrogenases has been made in the last 50 years. These complexes are the classical example of a multienzyme complexes. A conference on "-Keto Acid Dehydrogenase Complexes: Organization, Regulation, and Bi ...
Identification of Novel Non-Metal Haloperoxidases from the Marine
... However, clones in group B, including CS19 HPO clone, showed relatively higher homology of approximately 80% with 70% identity as shown in Fig. 3. ...
... However, clones in group B, including CS19 HPO clone, showed relatively higher homology of approximately 80% with 70% identity as shown in Fig. 3. ...
+ 2
... Question: Is fermentation a catabolic process or is it an anabolic process? Fermentation may be considered as two metabolic pathways, glycolysis and the extending reactions. It may also be considered as a single metabolic pathway from glucose to the final fermentation products. ...
... Question: Is fermentation a catabolic process or is it an anabolic process? Fermentation may be considered as two metabolic pathways, glycolysis and the extending reactions. It may also be considered as a single metabolic pathway from glucose to the final fermentation products. ...
Kinetic models of metabolism: model construction, model
... 2.1.6 The convenience kinetics formalism . . . . . . . . . . . . . . . 2.1.7 Rate laws chosen for this thesis . . . . . . . . . . . . . . . . . . 2.2 Determining parameters of the rate equations . . . . . . . . . . . . . . 2.2.1 Experimental techniques for measuring keq . . . . . . . . . . . 2.2.2 U ...
... 2.1.6 The convenience kinetics formalism . . . . . . . . . . . . . . . 2.1.7 Rate laws chosen for this thesis . . . . . . . . . . . . . . . . . . 2.2 Determining parameters of the rate equations . . . . . . . . . . . . . . 2.2.1 Experimental techniques for measuring keq . . . . . . . . . . . 2.2.2 U ...
Topic: Exchange and functions of carbohydrates
... - free HCl - combined HCl (to proteins and the products of their digestion) - total HCl (free HCl and combined HCl) - total acidity (all acid reacting components of ventricle – free HCl, combined HCl, organic components, calcium phosphate salts). Mucous substances. The basis of mucous substances are ...
... - free HCl - combined HCl (to proteins and the products of their digestion) - total HCl (free HCl and combined HCl) - total acidity (all acid reacting components of ventricle – free HCl, combined HCl, organic components, calcium phosphate salts). Mucous substances. The basis of mucous substances are ...
Aromatic amino acid metabolism
... adequate to support growth. Tyrosine, an essential nutrient for individuals with phenylketonuria, must be supplied in the diet. ...
... adequate to support growth. Tyrosine, an essential nutrient for individuals with phenylketonuria, must be supplied in the diet. ...
Krebs Cycle
... ultimately cycles to itself in a series of reactions—this is in contrast to a pathway in which a substrate undergoes conversion to a chemically-distinct product! - Krebs cycle is comprised of a total of eight enzymatic steps—excluding Step 0 for the synthesis of acetyl-CoA—and occurs within the mito ...
... ultimately cycles to itself in a series of reactions—this is in contrast to a pathway in which a substrate undergoes conversion to a chemically-distinct product! - Krebs cycle is comprised of a total of eight enzymatic steps—excluding Step 0 for the synthesis of acetyl-CoA—and occurs within the mito ...
Four Amino Acids Are Converted to Succinyl
... Four Amino Acids Are Converted to SuccinylCoA • The carbon skeletons of methionine, isoleucine, threonine,and valine are degraded by pathways that yield succinyl-CoA, an intermediate of the citric acid cycle. • Only portions of the carbon skeletons are converted to succinylCoA. • Four-fifths of the ...
... Four Amino Acids Are Converted to SuccinylCoA • The carbon skeletons of methionine, isoleucine, threonine,and valine are degraded by pathways that yield succinyl-CoA, an intermediate of the citric acid cycle. • Only portions of the carbon skeletons are converted to succinylCoA. • Four-fifths of the ...
6 | metabolism
... Just as the dollar is used as currency to buy goods, cells use molecules of ATP as energy currency to perform immediate work. The sugar (glucose) is stored as starch or glycogen. Energy-storing polymers like these are broken down into glucose to supply molecules of ATP. Solar energy is required to s ...
... Just as the dollar is used as currency to buy goods, cells use molecules of ATP as energy currency to perform immediate work. The sugar (glucose) is stored as starch or glycogen. Energy-storing polymers like these are broken down into glucose to supply molecules of ATP. Solar energy is required to s ...
STRUCTURE-FUNCTION STUDIES OF THE CARNITINE/CHOLINE
... acid metabolism by facilitating the transfer of activated fatty acids across intracellular membranes. To understand the mechanism of these enzymes, the structure of human peroxisomal L-carnitine acetyltransferase (CAT) in complex with its substrate, L-carnitine, was determined. The structure reveale ...
... acid metabolism by facilitating the transfer of activated fatty acids across intracellular membranes. To understand the mechanism of these enzymes, the structure of human peroxisomal L-carnitine acetyltransferase (CAT) in complex with its substrate, L-carnitine, was determined. The structure reveale ...
Life in the slow lane: molecular mechanisms of estivation
... species also show high tolerance for tissue dehydration; estivating, arboreal and freeze tolerant species all top the list of desiccation tolerant anurans (Hillman, 1980; Shoemaker, 1992; Storey and Storey, 1996). Spadefoot toads endure the loss of as much as 60% of their total body water (represent ...
... species also show high tolerance for tissue dehydration; estivating, arboreal and freeze tolerant species all top the list of desiccation tolerant anurans (Hillman, 1980; Shoemaker, 1992; Storey and Storey, 1996). Spadefoot toads endure the loss of as much as 60% of their total body water (represent ...
Lecture_11
... The symptoms of carnitine deficiency range from mild muscle cramping to severe weakness and even death. In general, muscle, kidney, and heart are the tissues primarily impaired. Muscle weakness during prolonged exercise is a symptom of a deficiency of carnitine acyltransferases because muscle relies ...
... The symptoms of carnitine deficiency range from mild muscle cramping to severe weakness and even death. In general, muscle, kidney, and heart are the tissues primarily impaired. Muscle weakness during prolonged exercise is a symptom of a deficiency of carnitine acyltransferases because muscle relies ...
Handout #2 - MSU Billings
... Norm. "Well you see, Norm, it's like this... A herd of buffalo can only move as fast as the slowest buffalo. And when the herd is hunted, it's the slowest and weakest ones at the back that are killed first. This natural selection is good for the herd as a whole, because the general speed and health ...
... Norm. "Well you see, Norm, it's like this... A herd of buffalo can only move as fast as the slowest buffalo. And when the herd is hunted, it's the slowest and weakest ones at the back that are killed first. This natural selection is good for the herd as a whole, because the general speed and health ...
Enzyme

Enzymes /ˈɛnzaɪmz/ are macromolecular biological catalysts. Enzymes accelerate, or catalyze, chemical reactions. The molecules at the beginning of the process are called substrates and the enzyme converts these into different molecules, called products. Almost all metabolic processes in the cell need enzymes in order to occur at rates fast enough to sustain life. The set of enzymes made in a cell determines which metabolic pathways occur in that cell. The study of enzymes is called enzymology.Enzymes are known to catalyze more than 5,000 biochemical reaction types. Most enzymes are proteins, although a few are catalytic RNA molecules. Enzymes' specificity comes from their unique three-dimensional structures.Like all catalysts, enzymes increase the rate of a reaction by lowering its activation energy. Some enzymes can make their conversion of substrate to product occur many millions of times faster. An extreme example is orotidine 5'-phosphate decarboxylase, which allows a reaction that would otherwise take millions of years to occur in milliseconds. Chemically, enzymes are like any catalyst and are not consumed in chemical reactions, nor do they alter the equilibrium of a reaction. Enzymes differ from most other catalysts by being much more specific. Enzyme activity can be affected by other molecules: inhibitors are molecules that decrease enzyme activity, and activators are molecules that increase activity. Many drugs and poisons are enzyme inhibitors. An enzyme's activity decreases markedly outside its optimal temperature and pH.Some enzymes are used commercially, for example, in the synthesis of antibiotics. Some household products use enzymes to speed up chemical reactions: enzymes in biological washing powders break down protein, starch or fat stains on clothes, and enzymes in meat tenderizer break down proteins into smaller molecules, making the meat easier to chew.