TissueNet database of human tissue protein–protein interactions
... Here, we focus on the human PPIs. Unlike unicellular organisms such as yeast, the human body is composed of many tissues, each expressing a distinct set of proteins [e.g. (8,9)]. Consequently, many proteins have varying PPI partners across tissues (10,11). A tissue-sensitive view of PPIs is therefor ...
... Here, we focus on the human PPIs. Unlike unicellular organisms such as yeast, the human body is composed of many tissues, each expressing a distinct set of proteins [e.g. (8,9)]. Consequently, many proteins have varying PPI partners across tissues (10,11). A tissue-sensitive view of PPIs is therefor ...
Isolation and Characterization of Rice MADS Box Gene
... C1032 (0sMADS5) was mapped on chromosome 6. The localization is consistent with the result of Kang et al.10 From this localization, we suspected that C1032 might be related to depressed palea-1 (dp-1),32 and did more precise mapping to determine the loci of dp-1 and C1032. Genomic DNA from 90 F 2 pl ...
... C1032 (0sMADS5) was mapped on chromosome 6. The localization is consistent with the result of Kang et al.10 From this localization, we suspected that C1032 might be related to depressed palea-1 (dp-1),32 and did more precise mapping to determine the loci of dp-1 and C1032. Genomic DNA from 90 F 2 pl ...
HW7 key - WordPress.com
... observed in more than 1 gene, and tags of length 8 will on average appear in less than 1 gene. n = Ng p = 20, 000 ...
... observed in more than 1 gene, and tags of length 8 will on average appear in less than 1 gene. n = Ng p = 20, 000 ...
The hybrid origins of three perennial Medicago species
... Gene Selection for NGS: Genes for Next Generation Sequencing (NGS) were selected from the reference genome sequence of M. truncatula in the Medicago HapMap project (http://www.medicagohapmap.org/). We used the GBrowse viewer and the Mt.3.0 version of the genome to select genes. One set of genes were ...
... Gene Selection for NGS: Genes for Next Generation Sequencing (NGS) were selected from the reference genome sequence of M. truncatula in the Medicago HapMap project (http://www.medicagohapmap.org/). We used the GBrowse viewer and the Mt.3.0 version of the genome to select genes. One set of genes were ...
A Study of Genetically Modified Foods: Their Advantages and
... How Genes Affect the Crops Creation of Genetically Modified Crops Advantages of Genetically Modified Crops Disadvantages of Genetically Modified Crops Future of the Technology ...
... How Genes Affect the Crops Creation of Genetically Modified Crops Advantages of Genetically Modified Crops Disadvantages of Genetically Modified Crops Future of the Technology ...
Genetics of Bacteriophage P22. II. Gene Order and Gene Function.
... A complete genetic map of the temperate Salmonella phage P22 has been constructed using a variety of methods. The map is circular, about 100 map units (percent recombination) in length, and shows clustering of related functions. The map order by function closely resembles the order reported for the ...
... A complete genetic map of the temperate Salmonella phage P22 has been constructed using a variety of methods. The map is circular, about 100 map units (percent recombination) in length, and shows clustering of related functions. The map order by function closely resembles the order reported for the ...
Document
... • For example: Human Blood Types (ABO blood groups) • Blood cells have a carbohydrate marker that is found on the surface of red blood cells. • These markers are called: A substance or B substance. • They are recognized by antibodies present in the blood serum of individuals for foreign carbohydrate ...
... • For example: Human Blood Types (ABO blood groups) • Blood cells have a carbohydrate marker that is found on the surface of red blood cells. • These markers are called: A substance or B substance. • They are recognized by antibodies present in the blood serum of individuals for foreign carbohydrate ...
Intro to Mendelian Genetics
... • Chromosomes were being inherited from parents. (1930s) • DNA specifically is the molecule being that gives us our traits. (1920s – 1950s) • What DNA is made of. (1953) ...
... • Chromosomes were being inherited from parents. (1930s) • DNA specifically is the molecule being that gives us our traits. (1920s – 1950s) • What DNA is made of. (1953) ...
Mutations in the MicroRNA Complementarity Site
... Our results and those of Prigge et al. (2005) are in striking contrast with those of Kim et al. (2005), who recently reported severe phenotypic alterations in transgenic plants bearing an antisense ATHB15 construct. To further analyze the involvement of At1g52150 on the phenotype of icu4 mutants, th ...
... Our results and those of Prigge et al. (2005) are in striking contrast with those of Kim et al. (2005), who recently reported severe phenotypic alterations in transgenic plants bearing an antisense ATHB15 construct. To further analyze the involvement of At1g52150 on the phenotype of icu4 mutants, th ...
Genetic Control of the Domestication Syndrome in Common Bean
... identify the minimumnumberof genes, their respective phenotypic effect, and their linkage relationships. The study of evolution under cultivation as an experimental approach for the study of evolution presents several advantages. Both the wild ancestor (or its immediate descendant) and the cultivate ...
... identify the minimumnumberof genes, their respective phenotypic effect, and their linkage relationships. The study of evolution under cultivation as an experimental approach for the study of evolution presents several advantages. Both the wild ancestor (or its immediate descendant) and the cultivate ...
Quantitative Genetics
... - phenotypes are constant in an environment (heritability measurements only apply to that environment) To develop norm of reaction: 1. Develop a homozygous or stable heterozygous line (cloning, selfing) 2. Allow different lines to develop in different environments Norm of reaction curves - Plotting ...
... - phenotypes are constant in an environment (heritability measurements only apply to that environment) To develop norm of reaction: 1. Develop a homozygous or stable heterozygous line (cloning, selfing) 2. Allow different lines to develop in different environments Norm of reaction curves - Plotting ...
5. Differential Gene Expression
... 8. Enhancers can also inhibit transcription (aka Silencers). ...
... 8. Enhancers can also inhibit transcription (aka Silencers). ...
The Plant Cell
... and bulges when aligned to their targets are predicted to cause translational regulation, as in the cases of lin-4 and let-7. On the other hand, a miRNA with perfect or nearly perfect complementarity with its target is predicted to cause RNA cleavage, and recent studies in both plants and animals ha ...
... and bulges when aligned to their targets are predicted to cause translational regulation, as in the cases of lin-4 and let-7. On the other hand, a miRNA with perfect or nearly perfect complementarity with its target is predicted to cause RNA cleavage, and recent studies in both plants and animals ha ...
CHAPTER 2 - ESSENTIALS OF HUMAN DEVELOPMENT
... a, factual, easy, p. 49 2.19. A mother and a father have four children (biological not adopted). All four children have blue eyes. Which of the following statements must be true? a. Each parent has brown eyes, but also has a recessive gene for blue eyes. b. Both parents have brown eyes, but only one ...
... a, factual, easy, p. 49 2.19. A mother and a father have four children (biological not adopted). All four children have blue eyes. Which of the following statements must be true? a. Each parent has brown eyes, but also has a recessive gene for blue eyes. b. Both parents have brown eyes, but only one ...
Applied Microbiolgy and Biotechnology
... We have shown that the alga can utilize stored ARA as a reservoir of VLC-PUFA for membrane modifications under sudden changes in environmental conditions, e.g., a sudden low-temperature shift or recovery from nitrogen starvation (Bigogno et al. 2002b; Khozin-Goldberg et al. 2005). We have further hy ...
... We have shown that the alga can utilize stored ARA as a reservoir of VLC-PUFA for membrane modifications under sudden changes in environmental conditions, e.g., a sudden low-temperature shift or recovery from nitrogen starvation (Bigogno et al. 2002b; Khozin-Goldberg et al. 2005). We have further hy ...
How could colouration affect behaviour in animals?
... prefer to mate yellow coloured females. It is suggested that this behaviour could be a pleiotropic effect or an effect of linked genes (Kronforst et al., 2006). Pleiotropy is the phenomenon where one single gene controls for multiple phenotypical traits. One well known example of pleiotropy comes wi ...
... prefer to mate yellow coloured females. It is suggested that this behaviour could be a pleiotropic effect or an effect of linked genes (Kronforst et al., 2006). Pleiotropy is the phenomenon where one single gene controls for multiple phenotypical traits. One well known example of pleiotropy comes wi ...
Mutations I: Changes in Chromosome Number and Structure
... Mutation – may even render the protein non-functional But this organism is not selected against, relative to others in the population that lack the duplication, because it still has the original, functional, gene. ...
... Mutation – may even render the protein non-functional But this organism is not selected against, relative to others in the population that lack the duplication, because it still has the original, functional, gene. ...
chapter_16
... Example showing how chromosomal rearrangements contribute to speciation in Anopheles gambiae. Avril Coghlan , Evan E. Eichler , Stephen G. Oliver , Andrew H. Paterson , Lincoln Stein. Chromosome evolution in eukaryotes: a multi-kingdom perspective. Trends in Genetics, Volume 21, Issue 12, (2005), 6 ...
... Example showing how chromosomal rearrangements contribute to speciation in Anopheles gambiae. Avril Coghlan , Evan E. Eichler , Stephen G. Oliver , Andrew H. Paterson , Lincoln Stein. Chromosome evolution in eukaryotes: a multi-kingdom perspective. Trends in Genetics, Volume 21, Issue 12, (2005), 6 ...
LDheatmap (Version 0.9-1): Example of Adding Tracks
... SNP genotypes. Rows correspond to subjects and columns correspond to SNPs. snp.support is a data frame whose rows correspond to SNPs and whose columns give information on the SNPs, such as their alleles and genomic location. The help file help("GIMAP5.CEU") gives full details. In addition to GIMAP5. ...
... SNP genotypes. Rows correspond to subjects and columns correspond to SNPs. snp.support is a data frame whose rows correspond to SNPs and whose columns give information on the SNPs, such as their alleles and genomic location. The help file help("GIMAP5.CEU") gives full details. In addition to GIMAP5. ...
intelligence
... Twin studies that compare the intellectual similarity of monozygotic twins relative to dizygotic twins have become a hallmark of much modern behavior–genetic research. If intelligence is genetically based, then the correlation of intelligence-test scores between pairs of monozygotic twins, who are g ...
... Twin studies that compare the intellectual similarity of monozygotic twins relative to dizygotic twins have become a hallmark of much modern behavior–genetic research. If intelligence is genetically based, then the correlation of intelligence-test scores between pairs of monozygotic twins, who are g ...
PhenoLink - a web-tool for linking phenotype Lactobacillus plantarum strains
... d) selecting gene sets based on their expression levels under different experimental conditions and then building phenotype-specific gene networks [4]. Though these methods allow finding relations between features and phenotypes, correlation based methods (a, b and c) are not suitable for finding pa ...
... d) selecting gene sets based on their expression levels under different experimental conditions and then building phenotype-specific gene networks [4]. Though these methods allow finding relations between features and phenotypes, correlation based methods (a, b and c) are not suitable for finding pa ...
General - Bioinformatics Research Group at SRI International
... Phase II: Prune pathways unlikely to be present No/few unique enzymes Most pathway steps present because they are used in another pathway Pathway very unlikely to be present in this organism ...
... Phase II: Prune pathways unlikely to be present No/few unique enzymes Most pathway steps present because they are used in another pathway Pathway very unlikely to be present in this organism ...
Antisense RNA
... Problems and solutions of RNAi • Delivery of siRNA to tissue is a problem both because: – The material must reach the target organ – And must also enter the cytoplasm of target cells. • RNA cannot penetrate cellular membranes, so systemic delivery of siRNA is unlikely to be successful. • RNA is qui ...
... Problems and solutions of RNAi • Delivery of siRNA to tissue is a problem both because: – The material must reach the target organ – And must also enter the cytoplasm of target cells. • RNA cannot penetrate cellular membranes, so systemic delivery of siRNA is unlikely to be successful. • RNA is qui ...
1 Rapid evolution of phenotypic plasticity and shifting thresholds of
... but rather the threshold for the response was shifted to higher temperatures over evolutionary time. These results demonstrate that apparent genetic assimilation can result from shifting thresholds of induction across environments and that analysis of the broader environmental context is critically ...
... but rather the threshold for the response was shifted to higher temperatures over evolutionary time. These results demonstrate that apparent genetic assimilation can result from shifting thresholds of induction across environments and that analysis of the broader environmental context is critically ...
here - Genetics
... o r more base-pair positions, and since any of four different base-pairs may occupy any one position, the number of possible mutant alleles is very large. It is important that each mutant allele of a particular locus be given a unique designation; e.g., by the use of serial numbers as suffixes. Use ...
... o r more base-pair positions, and since any of four different base-pairs may occupy any one position, the number of possible mutant alleles is very large. It is important that each mutant allele of a particular locus be given a unique designation; e.g., by the use of serial numbers as suffixes. Use ...
Gene expression profiling
In the field of molecular biology, gene expression profiling is the measurement of the activity (the expression) of thousands of genes at once, to create a global picture of cellular function. These profiles can, for example, distinguish between cells that are actively dividing, or show how the cells react to a particular treatment. Many experiments of this sort measure an entire genome simultaneously, that is, every gene present in a particular cell.DNA microarray technology measures the relative activity of previously identified target genes. Sequence based techniques, like serial analysis of gene expression (SAGE, SuperSAGE) are also used for gene expression profiling. SuperSAGE is especially accurate and can measure any active gene, not just a predefined set. The advent of next-generation sequencing has made sequence based expression analysis an increasingly popular, ""digital"" alternative to microarrays called RNA-Seq. However, microarrays are far more common, accounting for 17,000 PubMed articles by 2006.