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Seasonal regulation of a 24-kDa protein from red
Seasonal regulation of a 24-kDa protein from red

... the present study, a calcium chloride extraction method was used to identify cell-wall-associated xylem proteins that accumulated during periods of cold acclimation. A 24-kDa protein represented the predominant protein in both total protein and CaCl2 extracts during cold acclimation of field-grown p ...
QPrEST™—isotope-labeled multipeptide standards for
QPrEST™—isotope-labeled multipeptide standards for

... Mass spectrometry (MS) enables absolute quantification of endogenous proteins by the use of isotopelabeled standards as internal references. QPrEST standards, currently available for >13,000 human proteins, represent a novel class of recombinantly produced heavy isotope–labeled standards that are ad ...
With-the-great-explosion-of-use-of
With-the-great-explosion-of-use-of

... structural diversity of proteins that begins with different amino acid sequences (primary structure) of polypeptide chains that fold into final conformation of secondary and tertiary structures. It was proposed that the information for folding to the native conformation is present in the amino acid ...
Hydrophobic Interaction Chromatography (HIC
Hydrophobic Interaction Chromatography (HIC

... *Hydrophobic literally means “water fearing.” It refers to substances that do not mix well with water (i.e., Oil is hydrophobic). Note how it stays together in small beads and does not mix with water. Purpose: To separate hydrophobic proteins based on their tendency to stick to specially treated bea ...
10858_2016_75_MOESM1_ESM
10858_2016_75_MOESM1_ESM

... H-15N pairs. These are sequential 1HNi-1HNi+1 distance (2.8 Å), 1HNi-1H Ni+2 distance (4.2 Å), intra residue 1H Ni-2Hαi ...
A New Method to Detect Related Function Among Proteins
A New Method to Detect Related Function Among Proteins

Nonconvex Optimization Is Combinatorial Optimization
Nonconvex Optimization Is Combinatorial Optimization

... folding is the process by which a protein, consisting of a long chain of amino acids, assumes its functional shape. The computational problem is to predict this final conformation from the known sequence of amino acids. This requires minimizing an energy function consisting mainly of a sum of pairwi ...
Proteins and Enzymes
Proteins and Enzymes

... http://www.johnkyrk.com/DNAtranslation.html ...
Severa1 Proteins lmported into Chloroplasts Form
Severa1 Proteins lmported into Chloroplasts Form

... An abundant chloroplast stromal protein has been implicated in the assembly of the photosynthetic enzyme ribulose-1,.Ç-bisphosphate carboxylase/oxygenase (Rubisco) (Barraclough and Ellis, 1980; Roy et al., 1982; Cannon, Wang, and Roy, 1986; Gatenby et al., 1988), and has been referred to as either t ...
View Full PDF - Biochemical Society Transactions
View Full PDF - Biochemical Society Transactions

appendix 1
appendix 1

... Oats contained in these products must have been specifically produced, prepared or processed to reduce their gluten content and this must not exceed 20mg / kg (20 ppm) These foods will be subject to future review ...
8. ARTÍCULOS
8. ARTÍCULOS

... GTPases, and thus to regulate important cellular processes such as nucleocytoplasmic transport and mitotic spindle formation [4,5]. For this reason, it is thought that RLDs may act as guanine nucleotide exchange factors (GEFs) for small GTPases [6]. The HERC family can in turn be divided into two su ...
Alfy, a novel FYVE-domain-containing protein associated with
Alfy, a novel FYVE-domain-containing protein associated with

... FYVE-domain-containing proteins with unknown functions, several have structures resembling endosomal FYVE proteins (Stenmark et al., 2002) and, in order to identify a possible FYVE domain protein with a non-endosomal function, we therefore sought a protein with an unknown function whose structure wa ...
BIOLOGY
BIOLOGY

Operon Models
Operon Models

... 5. Using a permanent pen, draw the shape of the active form of the repressor protein onto the lower portion of the noodle/operon, in the operator region. Make the shape simple since you will need to carve it out using a serrated knife. Also, carve a matching shape into the regulatory repressor prote ...
Computational design of a pH-sensitive IgG binding
Computational design of a pH-sensitive IgG binding

... efforts to engineer pH-dependent protein switches have either used structure-guided insertion of ionizable groups (8) or systematic histidine scanning mutagenesis (9, 10). These approaches often result in lower affinity interactions or low sensitivity to physiologically relevant pH changes. Computat ...
Synaptic adhesion molecules - UCSF Physiology
Synaptic adhesion molecules - UCSF Physiology

Lesson 15. Nutrition
Lesson 15. Nutrition

Selective Binding of the Scavenger Receptor C
Selective Binding of the Scavenger Receptor C

... these key residues are present.2 Thus, SRCL differs from DCSIGN, the macrophage mannose receptor, serum mannosebinding protein, and other C-type lectins known to have roles in pathogen recognition, all of which fall into the second subgroup. Semiquantitative binding studies using cells expressing SR ...
Trichohyalin, an Intermediate Filament
Trichohyalin, an Intermediate Filament

... For these studies, the Mr 190,000 antiserum was purified by protein ASepharose CL-4B chromatography (17), and the IgG fraction was rechromatographed on an affinity column of the sheep follicle Mr 190,000 protein covalently linked to Sepharose 4B (Pharmacia). The purified antibody was dialyzed overni ...
Site-specific functionalization of proteins and their applications to
Site-specific functionalization of proteins and their applications to

... around cells they perform a magnificently diverse set of functions. Besides providing structure and stability, proteins are involved in cell signaling, catalyzing reactions, storage and transport, and are therefore extensively studied. Over the years, tools have become available for researchers to r ...
18_2014_1558_MOESM8_ESM
18_2014_1558_MOESM8_ESM

... represents protein relative abundance. Thresholds for decreased and increased abundance were set at <0.83 and >1.2, respectively. The P-value was calculated using Stouffer’s z-test, which enables P-values from several protein ratios belonging to the same analysis group to be combined, generating a s ...
Example 2 Monte Carlo Simulation
Example 2 Monte Carlo Simulation

Review on Dengue viral Replication, assembly and entry into the
Review on Dengue viral Replication, assembly and entry into the

... serotypes 1–4). It is also a bifunctional enzyme with a methyltransferase domain (MTase; residues 1–296) at its N-terminal end and a RNA-dependent RNA polymerase (RdRp; residues 320–900) at its C-terminal end. The structure of the MTase domain was previously solved for DENV [50] and recently solved ...
Sequence
Sequence

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Protein domain



A protein domain is a conserved part of a given protein sequence and (tertiary) structure that can evolve, function, and exist independently of the rest of the protein chain. Each domain forms a compact three-dimensional structure and often can be independently stable and folded. Many proteins consist of several structural domains. One domain may appear in a variety of different proteins. Molecular evolution uses domains as building blocks and these may be recombined in different arrangements to create proteins with different functions. Domains vary in length from between about 25 amino acids up to 500 amino acids in length. The shortest domains such as zinc fingers are stabilized by metal ions or disulfide bridges. Domains often form functional units, such as the calcium-binding EF hand domain of calmodulin. Because they are independently stable, domains can be ""swapped"" by genetic engineering between one protein and another to make chimeric proteins.
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