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Tricarboxylic Acid Cycle (TCA), Krebs Cycle
Tricarboxylic Acid Cycle (TCA), Krebs Cycle

... The inner mitochondrial membrane is impermeable to the most charged and hydrophilic substances. However it contains numerous transport proteins that permit the passage of specific molecules. 1- ATP-ADP transport, see oxid-phospho, Transporter for ADP & Pi from cytosol into mitochondria by specialize ...
01 P⁄g. iniciales (Page 1)
01 P⁄g. iniciales (Page 1)

... of these routes suggest that all of them were shaped to a considerable extent by the evolutionary recruitment of enzymes. Molecular phylogenetic trees show that the Calvin-Benson cycle was a relatively late development in the (eu)bacterial branch, suggesting that some form(s) of carbon assimilation ...
Sequence and Structure Classification of Kinases
Sequence and Structure Classification of Kinases

... similarity of fold alone does not necessarily indicate a common ancestor. Furthermore, structural information is much less readily available than sequence information. Thus, the most effective route to the identification of homologs and the prediction of protein function is provided by the integrati ...
Amino acids and insulin act additively to regulate components of the
Amino acids and insulin act additively to regulate components of the

... Results: Incubation of C2C12 myotubes with 0.2 × physiological amino acids concentration (0.2 × PC AA), relative to 1.0 × PC AA, significantly increased total proteolysis and the expression of 14-kDa E2 ubiquitin conjugating enzyme (p < 0.05). The proteasome inhibitor MG132 blocked the rise in prote ...
RED CELL MEMBRANE DEFECTS
RED CELL MEMBRANE DEFECTS

...  Most common enzymopathy in the EM pathway  World-wide, multi-racial distribution (more common in northern European)  Clinical expression ranges from severe hemolytic anemia in neonates to a fully compensated anemia  Anemia or jaundice or both are recognized in infancy or early childhood ...
Some Structural and Kinetic Aspects of L
Some Structural and Kinetic Aspects of L

... Domain A has a classical (α/β)8 topology, domain B is with an irregular β barrel and domain C can be characterized with α/β organization. If there is an additional N-terminal domain, it is usually formed by helix-turn-helix motif (Mattevi et al., 1996; Valentini et al., 2000). The active site of pyr ...
Computational protein design enables a novel one
Computational protein design enables a novel one

... Table S1), so we used the BRENDA database to identify a set of five homologous ACDH enzymes (SI Appendix, Table S1) (16– 18). Genes encoding the native sequence for each enzyme were synthesized, and the proteins produced and purified as described in Materials and Methods. The proteins were assayed f ...
35 Amino acid breakdown Amino acids comprise one of the three
35 Amino acid breakdown Amino acids comprise one of the three

... used to synthesize glucose. Isoleucine is both glucogenic and ketogenic, because it also results in acetyl-CoA formation. Leucine is converted to HMG-CoA (the ketone body precursor), and is then metabolized by cellular pathways that use HMG-CoA as an intermediate; leucine is thus a purely ketogenic ...
Chapter 23 Gluconeogenesis Gluconeogenesis, con`t.
Chapter 23 Gluconeogenesis Gluconeogenesis, con`t.

... • Equilibrium reactions that interconvert trioses , tetroses, pentoses, hexoses and a heptose. • Sequence of reactions depends on needs of cell. Overall stoichiometry depends on which components are pulled from equilibrium mixture. • “Shuffling reactions” very similar to those in Calvin-Benson cycle ...
HER2
HER2

... EGFR tyrosine kinase inhibitors. Cancer Cell 2006; 10: 25-38. Williams, C., Allison, JG, Vidal, GA, Burow, ME, Beckman, BS, Marrero, L., and Jones, FE. The ErbB4/HER4 receptor tyrosine kinase regulates gene expression by functioning as a STAT5a nuclear chaperone. JCB 2004; 167(3): 469-478. Wood ER, ...
University of Groningen Plasticity of airway smooth muscle
University of Groningen Plasticity of airway smooth muscle

... mass as they can be mitogenic for cultured ASM cells and/or can augment growth factor induced proliferation [9]. For example, cholinergic signalling (as described in Chapter 7) [10], tachykinins [11], inflammatory mediators such as histamine [12] and leukotriene D4 [13] have been reported to be pro- ...
Document
Document

... pyruvate dehydrogenase complex first oxidizes pyruvate to form CO2 and acetyl coenzyme A (acetyl-CoA), an energy-rich molecule composed of coenzyme A and acetic acid joined by a highenergy thiol ester bond. Acetyl-CoA arises from the catabolism of many carbohydrates, lipids, and amino acids. It can ...
bio98a_l10
bio98a_l10

... • group addition - often reversible, ie phosphorylation allosteric* = allo (other); steric (shape, object) ...
Metabolic adaptation of Mycobacterium avium subsp
Metabolic adaptation of Mycobacterium avium subsp

... compared the protein profiles of clinical strains of MAP prepared from the gastrointestinal tract of diseased cows with the protein profiles of the same strains after they were grown in vitro. LC-MSMS analyses revealed that the principal enzymes for the central carbon metabolic pathways, including g ...
Alternative isoleucine synthesis pathway in
Alternative isoleucine synthesis pathway in

... approached the mid-exponential phase, the biomass was harvested by centrifugation (10 000 g, 10 min), and the cell pellet was hydrolysed in 6 M HCl at 100 uC for 24 h. After air-drying overnight, the dried samples (containing free amino acids) were derivatized in tetrahydrofuran and N-(tert-butyldim ...
Eris - Molecules in Action, LLC
Eris - Molecules in Action, LLC

... In  a  fixed  backbone  calculation,  Eris  starts  from  the  native   structure  and  mutate  the  native  residues.  After  the  substitution,   the  side  chain  dihedrals  of  all  residues  are  minimized  using  a   Monte  Carlo ...
Chapter 8
Chapter 8

... nucleotides synthesis or can be incorporated into purine nucleotides. Thus they block purine nucleotides synthesis or interfere in nucleic acids synthesis. ...
Ecological speciation model
Ecological speciation model

... Homofermentative: glucose to 2 lactic acids, 85-95% of glucose carbon in lactate Heterofermentative: glucose to 1 lactate, 1 ethanol, and 1 carbon dioxide, only 50% or less of glucose carbon in lactate. Types of products will define the pathway used and ATP made. ...
Topic 4 Proteins as Drug Targets
Topic 4 Proteins as Drug Targets

... Contents ...
PPT slides - USD Biology
PPT slides - USD Biology

... • Carbohydrates = Glycolysis  Pyruvate  Acetyl CoA  to Krebs (pyruvate to acetyl-CoA is catalyzed by Pyruvate Dehydrogenase ...
Metabolic Pathway Flux Enhancement by Synthetic
Metabolic Pathway Flux Enhancement by Synthetic

... Enzymes were tagged with peptide ligands specific for these scaffold protein–protein interaction domains. The modular composition of the scaffolds was used to build various architectures that were critical for optimizing flux as discussed later. The mevalonate biosynthetic pathway presents an intere ...
Calcium Activation of ERK Mediated by Calmodulin Kinase I
Calcium Activation of ERK Mediated by Calmodulin Kinase I

... Ras/Rap family of small G proteins that in turn trigger a complex cascade of protein kinases terminating in activation of the MAP kinase family including the ERKs (17–20). The response of the ERK pathway to various stimuli can be cell type-specific and/or -dependent on regulation of different subcel ...
METABOLISM IN HEALTH AND DISEASES I Lecture 2 Pentose
METABOLISM IN HEALTH AND DISEASES I Lecture 2 Pentose

... been described • In these females there is co-incidence of a rare immune ...
Regulation of the pyruvate dehydrogenase complex
Regulation of the pyruvate dehydrogenase complex

... The PDC (pyruvate dehydrogenase complex) plays a central role in the maintenance of glucose homoeostasis in mammals. The carbon flux through the PDC is meticulously controlled by elaborate mechanisms involving post-translational (short-term) phosphorylation/dephosphorylation and transcriptional (long ...
ILA: DIABETES
ILA: DIABETES

... • Although the blood glucose level is high but glucose is not taken up by the cells due to insulin deficiency therefore the cells are starved • The patient will take more food (polyphagia) to compensate for the loss of glucose and also loss of protein ...
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Mitogen-activated protein kinase

Mitogen-activated protein kinases (MAPK) are protein kinases that are specific to the amino acids serine, threonine, and tyrosine. MAPKs belong to the CMGC (CDK/MAPK/GSK3/CLK) kinase group. MAPKs are involved in directing cellular responses to a diverse array of stimuli, such as mitogens, osmotic stress, heat shock and proinflammatory cytokines. They regulate cell functions including proliferation, gene expression, differentiation, mitosis, cell survival, and apoptosis.MAP kinases are found in eukaryotes only, but they are fairly diverse and encountered in all animals, fungi and plants, and even in an array of unicellular eukaryotes.The closest relatives of MAPKs are the cyclin-dependent kinases (CDKs).
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