
2009 exam with answers
... Catalysts cannot change the direction of reactions, which depend on the absorbance or release of energy, as that depends only on the nature of the reactants and the products 5. The progesterone receptor (PR) is a heterotetramer consisting of 3 types of subunit: an R subunit of molecular weight (MW) ...
... Catalysts cannot change the direction of reactions, which depend on the absorbance or release of energy, as that depends only on the nature of the reactants and the products 5. The progesterone receptor (PR) is a heterotetramer consisting of 3 types of subunit: an R subunit of molecular weight (MW) ...
file (4.1 MB, ppt)
... In globular proteins, tertiary interactions are frequently stabilized by the sequestration of hydrophobic amino acid residues in the protein core, from which water is excluded, and by the consequent enrichment of charged or hydrophilic residues on the protein's water-exposed surface. In secreted pro ...
... In globular proteins, tertiary interactions are frequently stabilized by the sequestration of hydrophobic amino acid residues in the protein core, from which water is excluded, and by the consequent enrichment of charged or hydrophilic residues on the protein's water-exposed surface. In secreted pro ...
AP Biology Test 1 Organic Chemistry Part III. Organic Molecules 1
... 20.A polypeptide can best be described as a A) monomer of a protein polymer. B) polymer containing 20 amino acid molecules. C) polymer containing 19 peptide bonds. D) polymer containing 20 peptide bonds. E) polymer of amino acids. 21. The 20 different amino acids found in polypeptides exhibit diffe ...
... 20.A polypeptide can best be described as a A) monomer of a protein polymer. B) polymer containing 20 amino acid molecules. C) polymer containing 19 peptide bonds. D) polymer containing 20 peptide bonds. E) polymer of amino acids. 21. The 20 different amino acids found in polypeptides exhibit diffe ...
Sequence Alignment - UTK-EECS
... – An optimal alignment is one with the minimum cost. – The edit distance of s and t is the cost of an optimal alignment of s and t under a cost function w denoted by dw(s, t). ...
... – An optimal alignment is one with the minimum cost. – The edit distance of s and t is the cost of an optimal alignment of s and t under a cost function w denoted by dw(s, t). ...
FARM ANIMAL NUTRITION
... Unsaturated & polyunsaturated – plant origin Precursors of cholesterol, prostaglandin and structural components of cells • Some vitamins are fat soluble ...
... Unsaturated & polyunsaturated – plant origin Precursors of cholesterol, prostaglandin and structural components of cells • Some vitamins are fat soluble ...
Faculty of Science Department of science Chemistry of
... of steroids. Biological functions. Structure and stereochemical aspects related to the steroid ring system. Examples of some chemical transformations with emphasis on Regio- and stereoselectivity. ■Nucleic acids (6) Structure of nucleic acids DNA and RNA. Biological function in relation to structure ...
... of steroids. Biological functions. Structure and stereochemical aspects related to the steroid ring system. Examples of some chemical transformations with emphasis on Regio- and stereoselectivity. ■Nucleic acids (6) Structure of nucleic acids DNA and RNA. Biological function in relation to structure ...
Modelling Protein Synthesis - Jannali
... • Genetic code- sequence of the bases along DNA strand. • Codon- 3 bases, the codon codes for one amino acid. • The two processes that use information from the DNA for synthesis of protein: - Transcription - Translation • RNA exists in the forms: - Messenger RNA ( mRNA ) is made in the nucleus, copi ...
... • Genetic code- sequence of the bases along DNA strand. • Codon- 3 bases, the codon codes for one amino acid. • The two processes that use information from the DNA for synthesis of protein: - Transcription - Translation • RNA exists in the forms: - Messenger RNA ( mRNA ) is made in the nucleus, copi ...
Alanine Probes of Supra-Molecular Structure and Dynamics
... addressed by solution NMR spectroscopy. One popular strategy in studies of high-molecular-weight proteins involves the use of a pair of a-ketoacids, a-ketobutyrate and a-ketoisovalerate, which serve as the biosynthetic precursors for the production of Ile and Leu / Val, respectively.1 Addition of th ...
... addressed by solution NMR spectroscopy. One popular strategy in studies of high-molecular-weight proteins involves the use of a pair of a-ketoacids, a-ketobutyrate and a-ketoisovalerate, which serve as the biosynthetic precursors for the production of Ile and Leu / Val, respectively.1 Addition of th ...
NMR Stucture of the Sterol Carrier Protein
... studies of nitroxide spin-labeled substrate binding are presented as a new basis for investigations of the mode of action of SCP2. The SCP2 fold is formed by a ®ve-stranded b-sheet and four a-helices. Fatty acid binding to a hydrophobic surface area formed by amino acid residues of the ®rst and thir ...
... studies of nitroxide spin-labeled substrate binding are presented as a new basis for investigations of the mode of action of SCP2. The SCP2 fold is formed by a ®ve-stranded b-sheet and four a-helices. Fatty acid binding to a hydrophobic surface area formed by amino acid residues of the ®rst and thir ...
Lecture 5
... residue pKi = pK1 and pKj = pK2 ; for D and E, pKi = pK1 and pKj - pKR ; For R, H and K, pKi = KR and pKj = pK2 ...
... residue pKi = pK1 and pKj = pK2 ; for D and E, pKi = pK1 and pKj - pKR ; For R, H and K, pKi = KR and pKj = pK2 ...
Bio Rad Proposal
... Goal: To allow students to employ protein gel electrophoresis to explore evolution at the molecular level Objectives: 1. Students will generate protein profile from the muscles of distantly and closely related species of fish. 2. Compare and contrast these profiles to the hypothesis that protein pro ...
... Goal: To allow students to employ protein gel electrophoresis to explore evolution at the molecular level Objectives: 1. Students will generate protein profile from the muscles of distantly and closely related species of fish. 2. Compare and contrast these profiles to the hypothesis that protein pro ...
Natural Polymers - Wikispaces
... Nature uses natural polymers to make life possible, as all living things are made from these polymers. In many ways, these natural polymers are more important than other polymers. ...
... Nature uses natural polymers to make life possible, as all living things are made from these polymers. In many ways, these natural polymers are more important than other polymers. ...
Protein Targetting Prokaryotes vs. Eukaryotes - mvhs
... – Introns are noncoding regions (“junk” DNA) – Exons are sections that code for part of protein – Introns are cut out of the pre mRNA and exons are joined together. ...
... – Introns are noncoding regions (“junk” DNA) – Exons are sections that code for part of protein – Introns are cut out of the pre mRNA and exons are joined together. ...
Getting things where they need to go: Protein Targeting
... Hypotheses for molecular basis of bipolar disorder •Suggest problem lies in protein targeting Proteins made in cytosol (cytosolic and membrane ones) Sorting places proteins in membrane and in lumen of organelles ...
... Hypotheses for molecular basis of bipolar disorder •Suggest problem lies in protein targeting Proteins made in cytosol (cytosolic and membrane ones) Sorting places proteins in membrane and in lumen of organelles ...
Macro-molecule study guide / worksheet
... 3. There are two basic kinds of nucleic acids. Ribonucleic Acid (RNA) which contains the sugar ribose and deoxyribonucleic acid (DNA) which contains the sugar deoxyribose. 4. DNA - 2 strands of nucleotides; RNA - 1 strand of nucleotides Enzymes - with few exceptions, they are proteins Catalyst - sub ...
... 3. There are two basic kinds of nucleic acids. Ribonucleic Acid (RNA) which contains the sugar ribose and deoxyribonucleic acid (DNA) which contains the sugar deoxyribose. 4. DNA - 2 strands of nucleotides; RNA - 1 strand of nucleotides Enzymes - with few exceptions, they are proteins Catalyst - sub ...
Lecture_9_2005
... • Interacting proteins - determining which proteins come together to form functional complexes. – Yeast 2-hybrid, affinity purification ...
... • Interacting proteins - determining which proteins come together to form functional complexes. – Yeast 2-hybrid, affinity purification ...
Protein Synthesis Simulation
... 6. The “Met” amino acid is the “start” codon and allows protein synthesis to begin. Find this codon on the RNA strand. Position the green window over it and click. 7. Build the protein by dragging the correct amino acid sequence from the “Universal Genetic Code Chart” into the box. Record the amino ...
... 6. The “Met” amino acid is the “start” codon and allows protein synthesis to begin. Find this codon on the RNA strand. Position the green window over it and click. 7. Build the protein by dragging the correct amino acid sequence from the “Universal Genetic Code Chart” into the box. Record the amino ...
Steps of Translation
... 2. A tRNA carrying an amino acid approaches 3. The Anticodon on the tRNA pairs with codon 4. The tRNA drops off it’s amino acid 5. An enzyme forms a peptide bond between amino acids 6. This process continues to form a protein until a STOP codon is reached and then the new protein is released. ...
... 2. A tRNA carrying an amino acid approaches 3. The Anticodon on the tRNA pairs with codon 4. The tRNA drops off it’s amino acid 5. An enzyme forms a peptide bond between amino acids 6. This process continues to form a protein until a STOP codon is reached and then the new protein is released. ...
control biological machines
... Compute (DNA) – Input/Output – Energetically efficient – High data density – Error correction Self replication Fabrication (synthesis) and breakdown All processes highly efficient ...
... Compute (DNA) – Input/Output – Energetically efficient – High data density – Error correction Self replication Fabrication (synthesis) and breakdown All processes highly efficient ...
H 2 O - cloudfront.net
... of amino acids for developing plants and animals. – “S” – signal: This type of proteins are responsible for cell communication. Includes insulin & other hormones – “C” – contractile: found mostly in muscle; Responsible for movement. Includes actin and myosin – “D” – defense: Proteins used by the imm ...
... of amino acids for developing plants and animals. – “S” – signal: This type of proteins are responsible for cell communication. Includes insulin & other hormones – “C” – contractile: found mostly in muscle; Responsible for movement. Includes actin and myosin – “D” – defense: Proteins used by the imm ...
Protein Synthesis Poster Project
... Materials: 3 pieces of construction paper, 1 pairs of scissors, crayons, glue or tape, model for tRNAs, construction paper (ribosomes),toothpicks or yarn for peptide bonds. Pre-Activity : BEFORE Beginning Poster: List the following steps of Translation (Protein Synthesis) in order on the back of thi ...
... Materials: 3 pieces of construction paper, 1 pairs of scissors, crayons, glue or tape, model for tRNAs, construction paper (ribosomes),toothpicks or yarn for peptide bonds. Pre-Activity : BEFORE Beginning Poster: List the following steps of Translation (Protein Synthesis) in order on the back of thi ...
polymers - ClassNet
... different proteins, found in living organisms. All amino acids can form two different isomers, therefore known as ‘chiral molecules’. A chiral molecule is able to exist in two forms, which mirror each other. ...
... different proteins, found in living organisms. All amino acids can form two different isomers, therefore known as ‘chiral molecules’. A chiral molecule is able to exist in two forms, which mirror each other. ...
Amino acid theory sheet
... and therefore have two optical isomers that are nonsuperimposable mirror images of each other. You will be required to explain and draw this. ...
... and therefore have two optical isomers that are nonsuperimposable mirror images of each other. You will be required to explain and draw this. ...
Protein structure prediction

Protein structure prediction is the prediction of the three-dimensional structure of a protein from its amino acid sequence — that is, the prediction of its folding and its secondary, tertiary, and quaternary structure from its primary structure. Structure prediction is fundamentally different from the inverse problem of protein design. Protein structure prediction is one of the most important goals pursued by bioinformatics and theoretical chemistry; it is highly important in medicine (for example, in drug design) and biotechnology (for example, in the design of novel enzymes). Every two years, the performance of current methods is assessed in the CASP experiment (Critical Assessment of Techniques for Protein Structure Prediction). A continuous evaluation of protein structure prediction web servers is performed by the community project CAMEO3D.