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Supplementary Methods
Supplementary Methods

Genetic Variation - Nicholls State University
Genetic Variation - Nicholls State University

File
File

... increasing the error rate of DNA replication. Others weaken the DNA strand, causing breaks and inversions that produce chromosomal mutations. Cells can sometimes repair the damage; but when they cannot, the DNA base sequence changes permanently. ...
gene
gene

... • single genes/traits can be transferred, • species boundaries are not limiting. ...
Microsoft Word
Microsoft Word

... Abstract Approximately 5% of men, although healthy, are infertile due to various reasons. Earlier studies from our lab suggest that various genetic factors are responsible for about 22% of male infertility. Hence, the present study was carried out to find the genetic causes of infertility in the rem ...
Neutral DNA - Penn State University
Neutral DNA - Penn State University

... • Determine the biological role of each functional sequence • Elucidate the evolutionary history of each type of sequence • Provide bioinformatic tools so that anyone can easily incorporate insights from comparative genomics into their research ...
Supplementary Data - Clinical Cancer Research
Supplementary Data - Clinical Cancer Research

... Asterand was also obtained. The resulting total RNA preparation was suitable for genetic sequencing and analysis. mRNA obtained was prepared for whole transcriptome sequencing using an Applied Biosystems SOLiD 3.0 (Sequencing by Oligo Ligation/Detection) next generation sequencing platform (Life Tec ...
90718-exm-04
90718-exm-04

... You are advised to spend 50 minutes answering the questions in this booklet. QUESTION ONE: Growth hormone Growth hormone is a hormone secreted by a part of the brain called the pituitary gland. Growth hormone stimulates the growth of bones and other tissues in humans under the age of 18-20. Children ...
GENES IN ACTION Section 1: Mutation and Genetic Change Key
GENES IN ACTION Section 1: Mutation and Genetic Change Key

... The splicing of eukaryotic genes creates additional opportunities for variation over time. Because each exon encodes a different part of a protein, cells can occasionally shuffle exons between genes and thus make new proteins. The thousands of proteins in human cells appear to result from shuffling ...
Analyzing Genomic Dose-Response Information to Inform Key
Analyzing Genomic Dose-Response Information to Inform Key

... literature focusing on gene or protein expression changes. Organize the results as it related to arsenic concentration. Do the available data support a cascade of biological responses progressing from adaptive to proliferative responses? ...
Document
Document

... To evaluate the effects of transcription factor mutants, a combined metabolic and regulatory model was used to evaluate whether the deletion of a transcription factor is lethal for growth on glycerol minimal medium. ...
Mechanisms of microevolution
Mechanisms of microevolution

... microevolution might be responsible for the pattern, and part of the scientist's job is to figure out which of these mechanisms caused the change: ...
Essential Bio 4.1
Essential Bio 4.1

... part of the discussions in class. After class, go back and review them. Complete the self-assessment rubric before submitting to Moodle. Avoid printing this if possible. ...
Section 1 Control of Gene Expression
Section 1 Control of Gene Expression

... – The genomes of eukaryotes are larger and more complex than those of prokaryotes. – Eukaryotic genes are organized into noncoding sections, called introns, and coding sections, called exons. ...
The Two Versions of the Human Genome - Max-Planck
The Two Versions of the Human Genome - Max-Planck

... snippet belongs to part A or B of the genome. However, whether A originates from the father or mother can be established only through further comparison with at least one parent. In this way, it was possible to resolve the two versions of almost all of the German subject’s 17,861 genes that code for ...
Module - Discovering the Genome
Module - Discovering the Genome

... http://www.dnai.org/c/index.html (Select Genome / Tour) Video on how gene duplication can lead to ...
Mutations - Allen ISD
Mutations - Allen ISD

...  UCA=Stop ...
7. Oncogenes
7. Oncogenes

... proto-oncogenes into oncogenes  DNA located in a specific chromosomal region is replicated numerous time in succession. ----> creating dozens, hundreds, or thousands of copies of the same stretch of DNA.  Chromosome regions containing amplified genes often exhibit a distinctive, abnormal appearanc ...
Gene Section IRF4 (interferon regulatory factor 4) Atlas of Genetics and Cytogenetics
Gene Section IRF4 (interferon regulatory factor 4) Atlas of Genetics and Cytogenetics

... BCR-ABL protein in majority of patients. IRF4 is shown to be underexpressed in CML patients along with its highly homologous family member IRF8. However the functional role of IRF4 in CML is not well characterized. ...
Other examples of second site suppressors.
Other examples of second site suppressors.

BEBERAPA MUTASI GEN katG
BEBERAPA MUTASI GEN katG

... polymerase, with the highest frequency at codon 526 and 531. While Isoniazid is a prodrug, must be activated by the enzyme catalase-peroxidase encoded by the gene katG of M. tuberculosis, this gene mutation resulting in INH resistant. The purpose of this research is to obtain information on the caus ...
Document
Document

... 5’-AG GTAAGT-3’ hit and miss affair ...
b, PKU
b, PKU

... tJ ...
Biology 207 Research Paper and Presentation on Cancer
Biology 207 Research Paper and Presentation on Cancer

... transgenic mice (in which the gene for Bcl-2 is overexpressed by genetic engineering) showed that synthesis of Bcl-2 results in accumulation of excess mature B lymphocytes and additional genetic changes (especially in the oncogene myc) associated with lymphomas (reviewed in Adams and Cory, 1998). Th ...
Biology 207 Research Paper and Presentation on Cancer
Biology 207 Research Paper and Presentation on Cancer

... transgenic mice (in which the gene for Bcl-2 is overexpressed by genetic engineering) showed that synthesis of Bcl-2 results in accumulation of excess mature B lymphocytes and additional genetic changes (especially in the oncogene myc) associated with lymphomas (reviewed in Adams and Cory, 1998). Th ...
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Oncogenomics



Oncogenomics is a relatively new sub-field of genomics that applies high throughput technologies to characterize genes associated with cancer. Oncogenomics is synonymous with ""cancer genomics"". Cancer is a genetic disease caused by accumulation of mutations to DNA leading to unrestrained cell proliferation and neoplasm formation. The goal of oncogenomics is to identify new oncogenes or tumor suppressor genes that may provide new insights into cancer diagnosis, predicting clinical outcome of cancers, and new targets for cancer therapies. The success of targeted cancer therapies such as Gleevec, Herceptin, and Avastin raised the hope for oncogenomics to elucidate new targets for cancer treatment.Besides understanding the underlying genetic mechanisms that initiates or drives cancer progression, one of the main goals of oncogenomics is to allow for the development of personalized cancer treatment. Cancer develops due to an accumulation of mutations in DNA. These mutations accumulate randomly, and thus, different DNA mutations and mutation combinations exist between different individuals with the same type of cancer. Thus, identifying and targeting specific mutations which have occurred in an individual patient may lead to increased efficacy of cancer therapy.The completion of the Human Genome Project has greatly facilitated the field of oncogenomics and has increased the abilities of researchers to find cancer causing genes. In addition, the sequencing technologies now available for sequence generation and data analysis have been applied to the study of oncogenomics. With the amount of research conducted on cancer genomes and the accumulation of databases documenting the mutational changes, it has been predicted that the most important cancer-causing mutations, rearrangements, and altered expression levels will be cataloged and well characterized within the next decade.Cancer research may look either on the genomic level at DNA mutations, the epigenetic level at methylation or histone modification changes, the transcription level at altered levels of gene expression, or the protein level at altered levels of protein abundance and function in cancer cells. Oncogenomics focuses on the genomic, epigenomic, and transcript level alterations in cancer.
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