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Slides-Brian_Charlesworth-Sex_and_molecular_evolution
Slides-Brian_Charlesworth-Sex_and_molecular_evolution

... What has all this got to do with the evolution of sex and recombination? • In order to understand how sexual reproduction and genetic recombination influence the evolutionary process, we need to have well-formulated models that can be related to data. • To produce these models, we need to include p ...
Is it on or off? The Use of Microarrays in Functional Genomics
Is it on or off? The Use of Microarrays in Functional Genomics

... Another exciting development in this field of personalized molecular medicine is using protein microarrays, based on the understanding that the dysfunction of protein interactions is the most direct, underlying cause of diseases as they oversee all biological processes and cellular fates. The intera ...
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File

- Horizon Discovery
- Horizon Discovery

... using cells of higher ploidy, a significant advantage when studying sensitive biological paradigms. In addition, haploid cells can be used to rapidly evaluate hits as part of post-screen validation cascades, making them a valuable tool for drug discovery work-flows. ...
Introduction to How Designer Children Work
Introduction to How Designer Children Work

... If you think of the human body as big, complicated, encrypted code, then the scientists mapping the human genome are attempting to break that code. Once the code is broken, it will reveal many secrets of how the human body works, and it could lead to greater disease prevention. In June 2000, scienti ...
Unit VII: Genetics
Unit VII: Genetics

... the different allelic combinations of the offspring ex: Cross: True breeding Tall x True breeding Short 1. Determine the genotypes of the parents ...
HW #1
HW #1

... poor choice for studying segregation and recombination? 2. What new procedures were carried out in Mendel’s work? Why was his experimental approach so effective? 3. What is Fisher’s most serious criticism of Mendel’s ratios? What does Fisher show is true of Mendel’s whole series of data? 4. ...
Phenotypic effects and variations in the genetic material (part 2)
Phenotypic effects and variations in the genetic material (part 2)

... Somatic Mutations: They occur in somatic cells so, affect only the individual and are not transmissible to future generation (non-heritable). (2) according to the types of mutation Spontaneous Mutations: A spontaneous mutation is one that occurs as a result of natural processes in cells and no mutag ...
LLog6 - CH 7 - Our Flesh and Blood
LLog6 - CH 7 - Our Flesh and Blood

... the MC1R gene which determines hair and eye color. In northern Europe, the people in that region have lighter skin and red hair (Scots and Irish) because the MC1R genes in that region have many more mutations and variants (10:3 ratio of nonsynon. : synon. changes) whereas in Africa, the people in th ...
Slide ()
Slide ()

... Two forms of muscular dystrophy are caused by deletion mutations in the dystrophin gene. (Adapted, with permission, from Hoffman and Kunkel 1989; photos, reproduced with permission, from Arthur P. Hays.) A. The relative position of the dystrophin gene within the Xp21 region of the X chromosome. An e ...
Eucharyotic Chromatin Organization
Eucharyotic Chromatin Organization

... (estimated 35,000 genes in the human genome) (4300 genes in E.coli bacteria)  2) introns that must be excised before functional mRNA is made.  3) DNA wrapped in histone protein complexes called nucleosomes. ...
Targeted Fluorescent Reporters: Additional slides
Targeted Fluorescent Reporters: Additional slides

... healthy fashion become an oncogene? What are the genetic changes? a) A gene can move to a new location and become under the control of a new promoter that is more active and thus more of the gene’s product is produced which stimulates the cell cycle. b) A gene can be duplicated (amplified) in a cell ...
Unit 4
Unit 4

... For example, the end product of an anabolic pathway may turn off its own production by inhibiting activity of an enzyme at the beginning of the pathway (feedback inhibition). Useful for immediate short-term response. ...
Genetic Engineering
Genetic Engineering

... sex-linked genes. More than 100 sex-linked genetic disorders have now been mapped to the X chromosome. ...
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Project 1 Concepts in Biology Project 1 Development of a PCR

... Most inherited genetic diseases are recessive, which means that a person must inherit two copies of the mutated gene to inherit a disorder. This is one reason that marriage between close relatives is discouraged; two genetically similar adults are more likely to give a child two copies of a defectiv ...
Chapter 10
Chapter 10

... of a single nucleotide 1. Substitution – a point mutation where one nucleotide in a codon is replaced with a different nucleotide, resulting in a new codon Ex. Sickle Cell Anemia – sub. Of A for T in a single codon ...
The Quest for Ancient DNA
The Quest for Ancient DNA

... areas are studied to determine markers and differences in mtDNA or Y chromosome DNA. ...
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Genetics and Genomics in Medicine Chapter 7 Questions Multiple

... In the sequence below, the blue sequence represents an exon containing coding DNA near the beginning of a large gene and green lines and letters are flanking intron sequence. Nine mutations are shown: an insertion of an Alu repeat insertion plus three deletions at top and five single nucleotide subs ...
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4.2 Correlation Cautions

... EXPERIMENTS are what we use to hold as many factors constant as possible. Yet, the finding might not generalize to other settings. (Ex: Rats, Saccharin, Bladder Tumors) ...
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midterm questions

A History of Innovation in Genetic Analysis
A History of Innovation in Genetic Analysis

... The Flavr Savr tomato, the first genetically engineered food product, is approved for market. • Applied Biosystems introduces systems that automate and standardize DNA-based technology for forensic investigation. • DNA fingerprinting using PCR becomes accepted in court as reliable forensic evidence ...
Genes can encode proteins or non
Genes can encode proteins or non

... mutation and a deletion exhibits the mutant phenotype, the mutation is said to fall within the deletion. When overlapping deletions are available along a chromosome this method provides rapid and reliable mapping. Often the physical map of the deletion can be established cytologically or molecularly ...
Figure 1 - West Chester University
Figure 1 - West Chester University

... • HIV-1 accessory spliced doubly spliced messages (TAT), may control host genome in latently infected cells and determine both viral transcription and possibly the fate of posttranscriptional events ...
Marek`s Disease Virus - Cal State LA
Marek`s Disease Virus - Cal State LA

... Class I genes are called B-F and they encode MHC molecules found on the surface of all nucleated cells. Class II genes are called B-L and they encode MHC molecules found on the surface of cells involved in immune function. The B21 haplotype, which maps to the B-F region, appears to confer resistance ...
G ENNOVATIONS Whole Exome Sequencing in Routine Clinical Practice Genomics Core Newsletter
G ENNOVATIONS Whole Exome Sequencing in Routine Clinical Practice Genomics Core Newsletter

... observation that 85% of disease-causing mutations are found in the coding sequence and regulatory regions of exons1 (For more information on WES, see Gennovations Volume 1, Issue 3). In recent years, there have been many published papers that use WES to identify unknown variants in individual patien ...
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Oncogenomics



Oncogenomics is a relatively new sub-field of genomics that applies high throughput technologies to characterize genes associated with cancer. Oncogenomics is synonymous with ""cancer genomics"". Cancer is a genetic disease caused by accumulation of mutations to DNA leading to unrestrained cell proliferation and neoplasm formation. The goal of oncogenomics is to identify new oncogenes or tumor suppressor genes that may provide new insights into cancer diagnosis, predicting clinical outcome of cancers, and new targets for cancer therapies. The success of targeted cancer therapies such as Gleevec, Herceptin, and Avastin raised the hope for oncogenomics to elucidate new targets for cancer treatment.Besides understanding the underlying genetic mechanisms that initiates or drives cancer progression, one of the main goals of oncogenomics is to allow for the development of personalized cancer treatment. Cancer develops due to an accumulation of mutations in DNA. These mutations accumulate randomly, and thus, different DNA mutations and mutation combinations exist between different individuals with the same type of cancer. Thus, identifying and targeting specific mutations which have occurred in an individual patient may lead to increased efficacy of cancer therapy.The completion of the Human Genome Project has greatly facilitated the field of oncogenomics and has increased the abilities of researchers to find cancer causing genes. In addition, the sequencing technologies now available for sequence generation and data analysis have been applied to the study of oncogenomics. With the amount of research conducted on cancer genomes and the accumulation of databases documenting the mutational changes, it has been predicted that the most important cancer-causing mutations, rearrangements, and altered expression levels will be cataloged and well characterized within the next decade.Cancer research may look either on the genomic level at DNA mutations, the epigenetic level at methylation or histone modification changes, the transcription level at altered levels of gene expression, or the protein level at altered levels of protein abundance and function in cancer cells. Oncogenomics focuses on the genomic, epigenomic, and transcript level alterations in cancer.
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