Nitric Oxide Signalling in Plants: Cross
... Currently, NO is recognized as one of the key messengers governing the overall control of Ca2+ homeostasis, and almost all types of Ca2+ channels and transporters are under its control. The effects of NO on Ca2+ channel and transporter activities can be divided into two mechanisms of action: a cGMP ...
... Currently, NO is recognized as one of the key messengers governing the overall control of Ca2+ homeostasis, and almost all types of Ca2+ channels and transporters are under its control. The effects of NO on Ca2+ channel and transporter activities can be divided into two mechanisms of action: a cGMP ...
Stockholm University
... and correct sequence was verified by Eurofins MWG Operon. 2.2. Cell culture, transfection of hGalR3 constructs and membrane preparation HEK293T cells were cultured in Dulbecco’s modified essential media with Glutamax I supplemented with 10% foetal bovine serum, 100 U/mL penicillin and 100 mg/mL strepto ...
... and correct sequence was verified by Eurofins MWG Operon. 2.2. Cell culture, transfection of hGalR3 constructs and membrane preparation HEK293T cells were cultured in Dulbecco’s modified essential media with Glutamax I supplemented with 10% foetal bovine serum, 100 U/mL penicillin and 100 mg/mL strepto ...
IOSR Journal of Pharmacy and Biological Sciences (IOSR-JPBS) e-ISSN: 2278-3008, p-ISSN:2319-7676.
... Molecular Docking of protein structures involve various possibilities of association are tried and verified on the basis of energy value, and the conformation with the least energy value is titled „best match‟ i.e. having best interaction of protein with ligand. Docking strategy plays a significant ...
... Molecular Docking of protein structures involve various possibilities of association are tried and verified on the basis of energy value, and the conformation with the least energy value is titled „best match‟ i.e. having best interaction of protein with ligand. Docking strategy plays a significant ...
Sequence identity and homology
... homologous”. Also sometimes defined as “Similar due to descent from a common ancestor.” Homology is either/or-there is no such thing as “percent homology”! Homologous is not a synonym for “similar”! It is, however, possible for only a part of two sequences to be homologous, for instance one domain i ...
... homologous”. Also sometimes defined as “Similar due to descent from a common ancestor.” Homology is either/or-there is no such thing as “percent homology”! Homologous is not a synonym for “similar”! It is, however, possible for only a part of two sequences to be homologous, for instance one domain i ...
The Identity of Proteins Associated with a Small Heat Shock Protein
... of protein-folding diseases and aging (3, 4). The sHSPs are defined by a conserved C-terminal domain of ⬃90 amino acids (the ␣-crystallin domain), which is flanked by a variable length N-terminal arm and a more conserved C-terminal extension (1, 5). These small proteins (16 – 42-kDa monomers) assemb ...
... of protein-folding diseases and aging (3, 4). The sHSPs are defined by a conserved C-terminal domain of ⬃90 amino acids (the ␣-crystallin domain), which is flanked by a variable length N-terminal arm and a more conserved C-terminal extension (1, 5). These small proteins (16 – 42-kDa monomers) assemb ...
Understanding the functional difference between growth
... In plasma, approximately 60% of the total amount of PROS1 is bound to C4BP, while the remaining 40% circulates free and functions as a cofactor for APC. It has recently been suggested that residues within the GLA and EGF1 domains of PROS1 act cooperatively for its APC cofactor function [37]. The PRO ...
... In plasma, approximately 60% of the total amount of PROS1 is bound to C4BP, while the remaining 40% circulates free and functions as a cofactor for APC. It has recently been suggested that residues within the GLA and EGF1 domains of PROS1 act cooperatively for its APC cofactor function [37]. The PRO ...
Protein © 2009 Cengage - Wadsworth
... synthesis (transcription) to cellular apparatus for protein synthesis (translation) ...
... synthesis (transcription) to cellular apparatus for protein synthesis (translation) ...
galanin - Personal Home Pages (at UEL)
... •Only one galanin receptor subtype has been cloned so far - GalR1. •Pharmacological evidence suggests more than one receptor subtype exists. ...
... •Only one galanin receptor subtype has been cloned so far - GalR1. •Pharmacological evidence suggests more than one receptor subtype exists. ...
Gastrointestinal Stromal Tumours(GIST)
... • In normal cells activation of the of the c-kit tyrosine kinase requires the presence of an endogenous ligand (KIT ligand, ckit ligand, or stem cell factor) • Approx 80 % of GISTs have KIT protooncogene mutations that lead to activation of the c-kit receptor resulting in spontaneous receptor activa ...
... • In normal cells activation of the of the c-kit tyrosine kinase requires the presence of an endogenous ligand (KIT ligand, ckit ligand, or stem cell factor) • Approx 80 % of GISTs have KIT protooncogene mutations that lead to activation of the c-kit receptor resulting in spontaneous receptor activa ...
The Sec34/35 Golgi Transport Complex Is Related to the Exocyst
... fusion, and these have also been found to contribute to the tethering of vesicles or organelles (Cao et al., 1998; Christoforidis et al., 1999; Waters and Hughson, 2000). Precisely how these different factors contribute to a given transport step and what interactions are key to the provision of spec ...
... fusion, and these have also been found to contribute to the tethering of vesicles or organelles (Cao et al., 1998; Christoforidis et al., 1999; Waters and Hughson, 2000). Precisely how these different factors contribute to a given transport step and what interactions are key to the provision of spec ...
Lehninger Principles of Biochemistry 5/e
... AMP-activated protein kinase - regulated by [AMP] - A reduced nutrient supply or by increase exercise cause the rise in [AMP] - increase glucose uptake, activates glycolysis and fatty acid oxidation - suppress energy requiring processes such as fatty acid, cholesterol, and ...
... AMP-activated protein kinase - regulated by [AMP] - A reduced nutrient supply or by increase exercise cause the rise in [AMP] - increase glucose uptake, activates glycolysis and fatty acid oxidation - suppress energy requiring processes such as fatty acid, cholesterol, and ...
The alphabet soup of plant intracellular signalling: enter cyclic
... before the pathway itself has been defined either biochemically, or by molecular genetics in plants. A foretaste is provided by a quick scan of the TIGR Arabidopsis gene index [35] which reveals four hits when searched for RyR, 251 with protein kinase A and 217 with protein kinase C. Naturally, DNA ...
... before the pathway itself has been defined either biochemically, or by molecular genetics in plants. A foretaste is provided by a quick scan of the TIGR Arabidopsis gene index [35] which reveals four hits when searched for RyR, 251 with protein kinase A and 217 with protein kinase C. Naturally, DNA ...
Structural and enzymatic characterization of a glycoside hydrolase
... cellulosome complexes [7], but are instead either secreted into the medium or attached to the cell membrane as lipoproteins. Indeed, approximately one-third of the encoded carbohydrate-degrading enzymes have been predicted to be lipoproteins [6], which may suggest that C. japonicus has developed a s ...
... cellulosome complexes [7], but are instead either secreted into the medium or attached to the cell membrane as lipoproteins. Indeed, approximately one-third of the encoded carbohydrate-degrading enzymes have been predicted to be lipoproteins [6], which may suggest that C. japonicus has developed a s ...
Gene Section CLTCL1 (clathrin heavy polypeptide-like 1) Atlas of Genetics and Cytogenetics
... CLTCL1/ALK may in fact be cases of CLTC/ALK Disease ? found in a case of ALK+ anaplasic large cell lymphoma. Abnormal protein ? 2197 amino acids, 248-250 kDa; 1634 (nearly all the CLTCL1 protein) N-term amino acids from CLTCL1, fused to the 562 C-term amino acids from ALK (i.e. the entire cytoplasmi ...
... CLTCL1/ALK may in fact be cases of CLTC/ALK Disease ? found in a case of ALK+ anaplasic large cell lymphoma. Abnormal protein ? 2197 amino acids, 248-250 kDa; 1634 (nearly all the CLTCL1 protein) N-term amino acids from CLTCL1, fused to the 562 C-term amino acids from ALK (i.e. the entire cytoplasmi ...
Going from where to why—interpretable
... allows a straightforward decomposition of a prediction into the individual contributions of each feature. It has been shown that naive Bayes is still surprisingly effective in cases where the independency assumption is violated (Rish, 2001). Given a set of features F = {F1 ,...,Fn }, a set of locati ...
... allows a straightforward decomposition of a prediction into the individual contributions of each feature. It has been shown that naive Bayes is still surprisingly effective in cases where the independency assumption is violated (Rish, 2001). Given a set of features F = {F1 ,...,Fn }, a set of locati ...
... Sidechains point out H bonds perp. to strand direction 3.6 residues/turn or 1.5 Å/amino acid Sidechains alternate up and down or 5.5 Å/turn 3 Å/amino acid. α Combination of above structures, with the alpha helix on top of the two stranded sheet. barrel β-sheet wrapped into a barrel sha ...
Newly described pattern recognition receptors team up against
... Necroptosis is a lytic type of cell death and requires the kinase activities of receptorinteracting protein 1 (RIP1) and RIP3. The discovery of necroptosis was prompted by the observation that tumour necrosis factor (TNF) treatment induces a necrotic type of cell death when caspase 8 activity is com ...
... Necroptosis is a lytic type of cell death and requires the kinase activities of receptorinteracting protein 1 (RIP1) and RIP3. The discovery of necroptosis was prompted by the observation that tumour necrosis factor (TNF) treatment induces a necrotic type of cell death when caspase 8 activity is com ...
Plant mitochondria contain the protein translocase subunits TatB
... pseudogene. There are however several pieces of evidence to suggest that mtTatC is a funtional gene that encodes a protein. The mtTatC transcript in Arabidopsis is edited at 36 individual sites (Bentolila et al., 2013). There are also several studies demonstrating that the Arabidopsis mtTatC is an e ...
... pseudogene. There are however several pieces of evidence to suggest that mtTatC is a funtional gene that encodes a protein. The mtTatC transcript in Arabidopsis is edited at 36 individual sites (Bentolila et al., 2013). There are also several studies demonstrating that the Arabidopsis mtTatC is an e ...
Physiological adaptations of Saccharomyces cerevisiae evolved for
... protein was Rpl7B, a component of the large subunit of the ribosome. This was the only ribosomal protein showing a significant change in expression of >1.5 fold in any direction. Rpl7B is highly similar to Rpl7A which shows no change in expression. The significance of this differential expression is ...
... protein was Rpl7B, a component of the large subunit of the ribosome. This was the only ribosomal protein showing a significant change in expression of >1.5 fold in any direction. Rpl7B is highly similar to Rpl7A which shows no change in expression. The significance of this differential expression is ...
Induction of the autism related oxytocin receptor in the
... Oxytocin in known for its maternity functions ...
... Oxytocin in known for its maternity functions ...
The DsbA Signal Sequence Directs Efficient
... be imagined that cytoplasmic proteins, in contrast to, for example, periplasmic proteins, have evolved to fold more rapidly and to avoid antifolding factors. For example, it has been shown that when the signal sequence of the periplasmic enzyme alkaline phosphatase (PhoAss) is fused directly to the ...
... be imagined that cytoplasmic proteins, in contrast to, for example, periplasmic proteins, have evolved to fold more rapidly and to avoid antifolding factors. For example, it has been shown that when the signal sequence of the periplasmic enzyme alkaline phosphatase (PhoAss) is fused directly to the ...
Hitting the Target: Emerging Technologies in the Search for Kinase
... If gene expression and protein translation represent the musicians and instruments of a cellular symphony, then posttranslational modification of proteins should be considered the conductor. Aside from containing sequences necessary for three-dimensional folding into domains, many proteins have evol ...
... If gene expression and protein translation represent the musicians and instruments of a cellular symphony, then posttranslational modification of proteins should be considered the conductor. Aside from containing sequences necessary for three-dimensional folding into domains, many proteins have evol ...
... The α-helices are in magenta, the β-sheets are in gold, the fluorophore is in cyan, and the random coils are in white. The β-sheets form an almost perfect cylinder with the fluorophore being located in nearly the geometric center. The random α-helices at the top form a lid for the structure. This co ...
G protein–coupled receptor
G protein–coupled receptors (GPCRs), also known as seven-transmembrane domain receptors, 7TM receptors, heptahelical receptors, serpentine receptor, and G protein–linked receptors (GPLR), constitute a large protein family of receptors that sense molecules outside the cell and activate inside signal transduction pathways and, ultimately, cellular responses. Coupling with G proteins, they are called seven-transmembrane receptors because they pass through the cell membrane seven times.G protein–coupled receptors are found only in eukaryotes, including yeast, choanoflagellates, and animals. The ligands that bind and activate these receptors include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters, and vary in size from small molecules to peptides to large proteins. G protein–coupled receptors are involved in many diseases, and are also the target of approximately 40% of all modern medicinal drugs. Two of the United States's top five selling drugs (Hydrocodone and Lisinopril) act by targeting a G protein–coupled receptor. The 2012 Nobel Prize in Chemistry was awarded to Brian Kobilka and Robert Lefkowitz for their work that was ""crucial for understanding how G protein–coupled receptors function."". There have been at least seven other Nobel Prizes awarded for some aspect of G protein–mediated signaling.There are two principal signal transduction pathways involving the G protein–coupled receptors: the cAMP signal pathway and the phosphatidylinositol signal pathway. When a ligand binds to the GPCR it causes a conformational change in the GPCR, which allows it to act as a guanine nucleotide exchange factor (GEF). The GPCR can then activate an associated G protein by exchanging its bound GDP for a GTP. The G protein's α subunit, together with the bound GTP, can then dissociate from the β and γ subunits to further affect intracellular signaling proteins or target functional proteins directly depending on the α subunit type (Gαs, Gαi/o, Gαq/11, Gα12/13).