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1 - life.illinois.edu
1 - life.illinois.edu

... mutation in the dnaA gene (dnaATS), You have isolated a Tn10 insertion (encodes resistance to tetracycline) that is 25 % linked to the dnaATS mutation by P22 HT mediated transduction. a. How could you transfer the dnaATS mutation to a new S. typhimurium strain? How would you show that the new strain ...
Quasi-Continuum Models of Low-Fkequency Oscillators in DNA
Quasi-Continuum Models of Low-Fkequency Oscillators in DNA

Directed Enzyme Evolution and High
Directed Enzyme Evolution and High

... of a library of protein mutants (or variants) and selection of a protein with desirable function from within that library [2]. It is an iterative Darwinian optimization process, whereby the fittest variants are selected from an ensemble of mutants [3]. Directed evolution can be used to target a numb ...
Exploring a fatal outbreak of Escherichia coli using
Exploring a fatal outbreak of Escherichia coli using

... 8. This will filter the table on the right hand side to show all the genomes that were either isolated in Germany, or had that word mentioned in the information that was submitted when the genome became public. Other information about these genomes can be seen in the columns, including information l ...
Powerpoint template for scientific posters (Swarthmore
Powerpoint template for scientific posters (Swarthmore

... On the right is a picture of a completed gel – all samples would be strong enough for sequencing except for sample 6, where troubleshooting would be necessary. ...
msb156484-sup-0001-Appendix
msb156484-sup-0001-Appendix

... phenotype, whereas genuinely interacting positives show a His+ / His+CHXS phenotype. Since each DB-X yeast strain is mated against a mini-library of 192 AD-Y yeast strains, it is possible, albeit unlikely, to obtain multiple interactions per mini-library. To mitigate this event we picked four coloni ...
Deletion of GLI3 supports the homology of the human Greig
Deletion of GLI3 supports the homology of the human Greig

... rupted in the first third of its coding region by two of the GCPS translocations (Vortkamp et al. 1991a). The third translocation breakpoint was shown to be located approximately 10 kbp downstream of the expressed sequence. Thus, mutations of GLI3 resulting in a reduced gene dosage are probably resp ...
A THREE-GENERATION APPROACH IN BIODEMOGRAPHY IS
A THREE-GENERATION APPROACH IN BIODEMOGRAPHY IS

... 30,000 individuals who were exposed to high levels of ionizing radiation (beginning in 1950). Such a multigeneration cohort study is necessary to identify genetic determinants of a complex phenotype such as senescence. Our conclusion about the necessity of introducing the three-generation approach t ...
The Central Dogma - Assets - Cambridge University Press
The Central Dogma - Assets - Cambridge University Press

... that single DNA strands have an orientation, since two 3 ends (or two 5 ends) cannot be joined by a phosphodiester bond; and that strings representing DNA are almost always written beginning at the 5 end. Ribonucleic acid, or RNA, is similar to DNA, but the sugar “backbone” consists of ribose rat ...
copyright © adelaide tuition centre
copyright © adelaide tuition centre

... A frame-shift mutation is the deletion or insertion of a base in the DNA sequence. Discuss the change EACH of these types of mutation will make in the DNA code and the possible effect EACH would have on the protein produced as a result ...
DNA and Protein Synthesis Notes 2015
DNA and Protein Synthesis Notes 2015

... Peptide Bonds (between AAs) – Grey Tubes 5. When you have constructed the complementary strand join the two strands together with Hydrogen bonds ...
DNA damage studies in cases of Trisomy 21 using Comet Assay
DNA damage studies in cases of Trisomy 21 using Comet Assay

... DS is now regarded as a genomic instability condition with over-expression of genes present on chromosome 21. Around 52 genes are identified on chromosome 21. Over-expression of these genes due to extra copy of 21st chromosome leads to increased level of oxidative stress lead-ing to DNAdamage which ...
DNA - The Double Helix
DNA - The Double Helix

... "unzip" when it needs to replicate - or make a copy of itself. DNA needs to copy itself when a cell divides, so that the new cells each contain a copy of the DNA. Without these instructions, the new cells wouldn't have the correct information. The hydrogen bonds are represented by small circles. Col ...
Shark Fin Forensics
Shark Fin Forensics

... different species' DNA.) To do this, you must add primers and reagents to the unknown shark fin DNA samples as well as your great white DNA sample. First, use the pipette to load “Taq” and insert it into each tube. (You can pick up the pipette from the bench and then click on the Taq jar to generate ...
Definition of a 1-Mb homozygous deletion at 9q32-q33 in a
Definition of a 1-Mb homozygous deletion at 9q32-q33 in a

... BamHI, using WI13592 and stSG46662 as probes. Figure 2 displays an autoradiogram of a Southern blot probed with WI13592. Strong signals were detected on each lane containing normal lymphoblast DNA (lanes 1, 3, and 5), but no signal was detected on corresponding lanes containing KYBTDS DNA (lanes 2, ...
PDF
PDF

... decide to combine the dut1 mutation with mutations in various genes known to be involved in DNA repair. Most of the cells carrying these pairs of mutations do not have a phenotype that is significantly more severe than the parent strains carrying the individual mutations. However, you find two genes ...
PGS: 274 – 284
PGS: 274 – 284

... b. They experience problems with bleeding to death. c. This was a disorder associated with the “Royal Blue-Bloods of Europe” – They were inbreeding to keep the crown “ In the Family”. d. Treatment? These individuals have to keep AHF with them at all times in case they get hurt. If they do get hurt a ...
Mining SNPs from public sequence Databases
Mining SNPs from public sequence Databases

Activity 2.16 Reebops
Activity 2.16 Reebops

Mining Single Nucleotide Polymorphisms from public sequence
Mining Single Nucleotide Polymorphisms from public sequence

... SNPs result from replication errors and DNA damage ...
Document
Document

... DNA According to Watson & Crick (1953) ...
DNA Review Worksheet
DNA Review Worksheet

... o ____________________and ___________________are complementary. They both require _______ hydrogen bonds. o __________________and _________________are complementary. They both require _______ hydrogen bonds. o ___________________of bases determines the genetic information and is unique to each organ ...
Gene!
Gene!

...  Stop codons break genome into segments between consecutive Stop codons  The subsegments of these that start from the Start codon (ATG) are ORFs  ORFs in different frames may overlap ATG ...
Epigenetics 12
Epigenetics 12

... 1. TWO volunteers for next week (September 13th): chromatin assembly ...
KS4 Chromosomes, Genes and DNA
KS4 Chromosomes, Genes and DNA

... Each chromosome is a very long molecule of tightly coiled DNA. DNA molecules carry the code that controls what your cells are made of and what they do. Which part of a DNA molecule holds this information? 18 of 47 ...
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Genomic library



A genomic library is a collection of the total genomic DNA from a single organism. The DNA is stored in a population of identical vectors, each containing a different insert of DNA. In order to construct a genomic library, the organism's DNA is extracted from cells and then digested with a restriction enzyme to cut the DNA into fragments of a specific size. The fragments are then inserted into the vector using DNA ligase. Next, the vector DNA can be taken up by a host organism - commonly a population of Escherichia coli or yeast - with each cell containing only one vector molecule. Using a host cell to carry the vector allows for easy amplification and retrieval of specific clones from the library for analysis.There are several kinds of vectors available with various insert capacities. Generally, libraries made from organisms with larger genomes require vectors featuring larger inserts, thereby fewer vector molecules are needed to make the library. Researchers can choose a vector also considering the ideal insert size to find a desired number of clones necessary for full genome coverage.Genomic libraries are commonly used for sequencing applications. They have played an important role in the whole genome sequencing of several organisms, including the human genome and several model organisms.
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