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ASPARAGINASE FROM ASPERGILLUS ORYZAE ENCODED BY
ASPARAGINASE FROM ASPERGILLUS ORYZAE ENCODED BY

... for industrial production of enzymes. Strain A1560 also contains inactive genes related to aflatoxin synthesis. Strain A1560 was genetically modified by site-directed disruption of three endogenous amylase genes, one alkaline protease gene, and one neutral metalloprotease I gene. The inactivation o ...
Release Notes for Genomes Processed Using Complete Genomics
Release Notes for Genomes Processed Using Complete Genomics

L-Lysin-Production with Corynebacterium glutamicum
L-Lysin-Production with Corynebacterium glutamicum

... Metabolite sensors as a high-throughput tool. a)The principle of the L-lysine sensor is based on the transcription factor LysG recognizing its effector L-lysine and the fusion of the LysG-target gene with eYFP asreporter. b)Cells accumulating higher intracellular L-lysine concentrations and carrying ...
PPT - Glasnost
PPT - Glasnost

... Beyond Scalars ...
A GENETIC LINKAGE MAP OF Phycomyces blakesleeanus
A GENETIC LINKAGE MAP OF Phycomyces blakesleeanus

... initiation of sporangiophores. The responses to light have been most thoroughly analyzed, in part driven by the efforts of Nobel laureate Max Delbrück who aimed to develop Phycomyces into the “phage of vision” (Cohen et al. 1975; Cerdá-Olmedo and Lipson 1987). All these properties have made Phycomyc ...
Comparison of three molecular methods for typing Aeromonas
Comparison of three molecular methods for typing Aeromonas

... bacteria, and ubiquitous in aquatic environments, although they are also involved in a variety of human infections (Janda and Abbott 1998). Aeromonas popoffii is the most recently described species (Huys et al. 1997) and is commonly found in freshwater and seawater (Soler et al. 2002). Although to ou ...
Sorting Out the Genome
Sorting Out the Genome

... The importance of identifying the shortest reversal sequence is not that we need a high-performance algorithm for sorting genes on chromosomes. Sorting the genes is not really the point. The shortest pathway matters because it is the best available estimate of the true reversal distance between two ...
Identification and characterization of genetic variants in the
Identification and characterization of genetic variants in the

... A notorious very low conc. of lysozyme revealed that further investigations and analysis of such rarely existed bovine families are the essential pre-requisite: To identify more LZM+ animals in the general dairy cattle population through lys-mic genotyping. To search out more new genetic variants fo ...
Standard Genetic Nomenclature - Iowa State University Digital
Standard Genetic Nomenclature - Iowa State University Digital

... can be consistently linked to function in a way that facilitates effective computational analysis and promotes comparative genomics. In 1998, the GO Consortium was formed to standardize functional annotation in the form of gene ontologies that can be used across all eukaryotes (Gene Ontology Consort ...
Genetic and epigenetic processes in seed development Allan R
Genetic and epigenetic processes in seed development Allan R

Van de Mark, Daniel: The Numerous Caveats of Designing, Implementing, and Interpreting Genome-Wide Association Studies
Van de Mark, Daniel: The Numerous Caveats of Designing, Implementing, and Interpreting Genome-Wide Association Studies

... here on, I will discuss only linking to disease phenotypes, but it is implied that the same methods could always be used to link variants to other quantitative traits). These studies involve genotyping members of a population on the basis of genetic markers that are spread throughout the genome, and ...
Vertebrate genomics : More fishy tales about Hox genes
Vertebrate genomics : More fishy tales about Hox genes

Standard Genetic Nomenclature - Iowa State University Digital
Standard Genetic Nomenclature - Iowa State University Digital

Divergent evolution of oxidosqualene cyclases in plants
Divergent evolution of oxidosqualene cyclases in plants

... a novel phenolic pathway in Brassicaceae (Matsuno et al., 2009). Families of genes for enzymes implicated in plant secondary metabolism (e.g. cytochrome P450s, glycosyltransferases, acyltransferases, prenyltransferases) have commonly expanded, and the different members have acquired new functions by ...
Origin of the eukaryotic cell
Origin of the eukaryotic cell

Section 2: Energy Flow in Ecosystems
Section 2: Energy Flow in Ecosystems

... • Like prokaryotic cells, eukaryotic cells have proteins that regulate transcription. But many more proteins are involved, and the interactions are more complex. • The genetic switch involves the first step of transcription, when RNA polymerase binds to the promoter region. • The proteins involved i ...
Unequal Crossing Over Locus by KIR Cutting Edge: Expansion of the
Unequal Crossing Over Locus by KIR Cutting Edge: Expansion of the

Divergent evolution of oxidosqualene cyclases in plants
Divergent evolution of oxidosqualene cyclases in plants

Repeat mediated gene duplication in the Drosophila
Repeat mediated gene duplication in the Drosophila

... was added, and this longer sequence was used to identify the endpoints (via BLAST). This process was repeated until the alignment no longer terminated at the end of the partition, and the duplication endpoint was identified. Protein coding sequences were inferred using the initial published annotatio ...
Genomic Analysis of Arabidopsis Thaliana
Genomic Analysis of Arabidopsis Thaliana

... Chang C., Bowman J.L., DeJohn A.W., Lander E.S., and Meyerowitz E.M. (1988). Restriction fragment length polymorphism linkage map for Arabidopsis thaliana. Proeedings of National Academy of Sciences USA 85, 6856–6860. [The first RFLP map of Arabidopsis is reported using mainly randomly selected lamb ...
Exercise - GEP Community Server
Exercise - GEP Community Server

... 4. For the next exercise, we will use an Excel workbook (HMM_intron.xls) to explore the properties of Hidden Markov Models. Before continuing with the rest of this exercise, please read the HMM Spreadsheet Manual to learn how to use this Excel workbook. Make a copy of the Excel workbook and change ...
Continuous Representations of Time Series Gene Expression Data
Continuous Representations of Time Series Gene Expression Data

... Recently, several papers have focused on modeling and analyzing the temporal aspects of gene expression data. In Holter   [10] a time translational matrix is used to model the temporal relationships between different modes of the Singular Value Decomposition (SVD). Unlike our work, this method ...
Theoretical and Applied Genetics
Theoretical and Applied Genetics

... Brassica species and comparative genetic analysis between Arabidopsis and Brassica show a high level of chromosomal and gene duplication and rearrangement in all diploid and amphidiploid Brassica species. In particular, amphidiploid Brassica species have extremely complex genome structure and gene f ...
A long-term demasculinization of X
A long-term demasculinization of X

巴西橡胶Pto类抗病同源序列的克隆与系统发育重建
巴西橡胶Pto类抗病同源序列的克隆与系统发育重建

... Natural rubber is not only an important industrial material but also an important strategic resource, the Para rubber tree (Hevea brasiliensis Willd. ex A. Juss.), is the only commercial source at present, due to its high rubber content and quality (Backhaus, 1985). Natural rubber production is curr ...
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Pathogenomics

Pathogen infections are among the leading causes of infirmity and mortality among humans and other animals in the world. Until recently, it has been difficult to compile information to understand the generation of pathogen virulence factors as well as pathogen behaviour in a host environment. The study of Pathogenomics attempts to utilize genomic and metagenomics data gathered from high through-put technologies (e.g. sequencing or DNA microarrays), to understand microbe diversity and interaction as well as host-microbe interactions involved in disease states. The bulk of pathogenomics research concerns itself with pathogens that affect human health; however, studies also exist for plant and animal infecting microbes.
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