Visualization with the Integrative Genomics Viewer (IGV)
... You can add as many tracks as you want. They don’t need to be of the same type or format: you can combine a ChIP-seq enrichment track and the corresponding alignment track IF they are done on the same reference ...
... You can add as many tracks as you want. They don’t need to be of the same type or format: you can combine a ChIP-seq enrichment track and the corresponding alignment track IF they are done on the same reference ...
Conserved syntenic clusters of protein coding genes are missing in birds
... many conserved genes that could not be found in the previous assembly (for example, [20]), and yielded significant BLAT-alignments for approximately 96% of genes from a positive control search set consisting of randomly selected lizard gene models with known orthologs in birds). Lastly, this subset ...
... many conserved genes that could not be found in the previous assembly (for example, [20]), and yielded significant BLAT-alignments for approximately 96% of genes from a positive control search set consisting of randomly selected lizard gene models with known orthologs in birds). Lastly, this subset ...
Comparison of Target-Capture and Restriction
... Abstract.—Restriction-site associated DNA sequencing (RAD-seq) and target capture of specific genomic regions, such as ultraconserved elements (UCEs), are emerging as two of the most popular methods for phylogenomics using reducedrepresentation genomic data sets. These two methods were designed to ta ...
... Abstract.—Restriction-site associated DNA sequencing (RAD-seq) and target capture of specific genomic regions, such as ultraconserved elements (UCEs), are emerging as two of the most popular methods for phylogenomics using reducedrepresentation genomic data sets. These two methods were designed to ta ...
The Biology and Evolution of Mammalian Y Chromosomes
... the Y chromosome: testis determination. In 1959, reports of 45,X females (Turner syndrome, with oocyte-depleted ovaries) and 47,XXY males (Klinefelter syndrome, with germ-cell-depleted testes) established the existence of a testis-determining gene on the human Y chromosome (32, 53), and the ensuing ...
... the Y chromosome: testis determination. In 1959, reports of 45,X females (Turner syndrome, with oocyte-depleted ovaries) and 47,XXY males (Klinefelter syndrome, with germ-cell-depleted testes) established the existence of a testis-determining gene on the human Y chromosome (32, 53), and the ensuing ...
Phytopathology
... DNA array technology, essentially a reverse dot blot technique, is an emerging methodology useful for identification of DNA fragments and may be applicable for rapid identification and detection of plant pathogens associated with plants (20,21,26). An array of species-specific oligonucleotide probes ...
... DNA array technology, essentially a reverse dot blot technique, is an emerging methodology useful for identification of DNA fragments and may be applicable for rapid identification and detection of plant pathogens associated with plants (20,21,26). An array of species-specific oligonucleotide probes ...
MOLECULAR TECHNIQUES IN LABORATORY DIAGNOSIS
... Schematic of Multiplex PCR In multiplex PCR more than one target sequence can be amplified by including more than one pair of primers in the reaction. ( Amplifying various genes simultaneously) ...
... Schematic of Multiplex PCR In multiplex PCR more than one target sequence can be amplified by including more than one pair of primers in the reaction. ( Amplifying various genes simultaneously) ...
Gene expression patterns in human placenta
... placenta and marked invasion of inflammatory cells into the placenta (27). Also, the amnion compared with the chorion is remarkably nonimmunogenic: the amniotic membrane transplantation procedure does not require systemic immunosuppressives (21). Consistent with this observation, 2-microglobulin an ...
... placenta and marked invasion of inflammatory cells into the placenta (27). Also, the amnion compared with the chorion is remarkably nonimmunogenic: the amniotic membrane transplantation procedure does not require systemic immunosuppressives (21). Consistent with this observation, 2-microglobulin an ...
Gene regulation in three dimensions
... Last, but not least I would like to thank Julie my fiancé who has supported me and been there for me when I needed it the most. K.T.W ...
... Last, but not least I would like to thank Julie my fiancé who has supported me and been there for me when I needed it the most. K.T.W ...
Natural variation in nucleolar dominance reveals
... n genetic hybrids or allopolyploids, nucleoli often assemble at specific chromosomal loci of one parent but not the other. This phenomenon, known as nucleolar dominance (1–4), was initially discovered as a change in chromosome structure (5). At nucleolus organizer regions (NORs), the loci where nucl ...
... n genetic hybrids or allopolyploids, nucleoli often assemble at specific chromosomal loci of one parent but not the other. This phenomenon, known as nucleolar dominance (1–4), was initially discovered as a change in chromosome structure (5). At nucleolus organizer regions (NORs), the loci where nucl ...
Endogenous Retroviral Elements in Human DNA1
... scription (retroposition) (1). The information generated in this manner includes both sequence elements, which seem to have used cellular mechanisms for passive retroposition, as well as retroelements containing reverse transcriptase- and/or integrase-related sequences possibly initiating their own ...
... scription (retroposition) (1). The information generated in this manner includes both sequence elements, which seem to have used cellular mechanisms for passive retroposition, as well as retroelements containing reverse transcriptase- and/or integrase-related sequences possibly initiating their own ...
Module 1: Introduction
... • Set of biological phrases (terms) which are applied to genes: – protein kinase – apoptosis – Membrane ...
... • Set of biological phrases (terms) which are applied to genes: – protein kinase – apoptosis – Membrane ...
Discussion paper - Office of the Gene Technology Regulator
... (GMOs) and ensure that new technologies are regulated in a manner commensurate with the risks they pose. The technical review aims to focus on new technologies and examine: cases where the capture or exclusion of these techniques is not clear, and whether those new technologies should be regulated ...
... (GMOs) and ensure that new technologies are regulated in a manner commensurate with the risks they pose. The technical review aims to focus on new technologies and examine: cases where the capture or exclusion of these techniques is not clear, and whether those new technologies should be regulated ...
v5_02_alcoholism_and_our_genes
... Copyright © 2009 Pearson Education, Inc. publishing as Benjamin Cummings ...
... Copyright © 2009 Pearson Education, Inc. publishing as Benjamin Cummings ...
Estimating complexity and adaptation in the embryo: a
... In here, I analysed gene expression information to estimate both complexity and adaptation in the embryo using a statistical approach. To measure complexity, I developed quantitative measures of spatial complexity and used them in publicly available gene expression data (thousands of in situ hybridi ...
... In here, I analysed gene expression information to estimate both complexity and adaptation in the embryo using a statistical approach. To measure complexity, I developed quantitative measures of spatial complexity and used them in publicly available gene expression data (thousands of in situ hybridi ...
Research Project Final Report
... the second parent. These lines have been used to make a genetic map that will inform future studies of quantitative variation in seed bleaching under field conditions. Besides this ‘open’ approach to gene identification, we have studied variation in two candidate genes, either or both of which may i ...
... the second parent. These lines have been used to make a genetic map that will inform future studies of quantitative variation in seed bleaching under field conditions. Besides this ‘open’ approach to gene identification, we have studied variation in two candidate genes, either or both of which may i ...
Genomic gains and losses influence expression levels of genes
... aberration but rather secondary events associated with progression. This is supported by the fact that especially trisomy 8 occurs in addition to a large variety of primary aberrations in AML such as t(8;21)(q22;q22), inv(16)(p13q22), t(15;17)(q22;q12), 11q23/MLL rearrangements.11,12 In contrast, lo ...
... aberration but rather secondary events associated with progression. This is supported by the fact that especially trisomy 8 occurs in addition to a large variety of primary aberrations in AML such as t(8;21)(q22;q22), inv(16)(p13q22), t(15;17)(q22;q12), 11q23/MLL rearrangements.11,12 In contrast, lo ...
Genetic Homologies between Flagellar Antigens of
... Hybrids of Salmonella abony and Escherichia coli combining antigenic characteristics of both parents have been obtained. In this case the antigens, each determined by distinct structural genes, retain their original identity. Only flagellar antigens have so far been studied, and these strains would ...
... Hybrids of Salmonella abony and Escherichia coli combining antigenic characteristics of both parents have been obtained. In this case the antigens, each determined by distinct structural genes, retain their original identity. Only flagellar antigens have so far been studied, and these strains would ...
association study of 37 genes suggests involvement of DDC
... inhibitors (SSRIs) and dopamine receptor antagonists have a role in reducing specific associated symptoms in autism: aggression, self-injury and compulsive behaviours (Nikolov et al. 2006). And third, neuroimaging studies with positron emission tomography (PET) have shown abnormal asymmetry of serot ...
... inhibitors (SSRIs) and dopamine receptor antagonists have a role in reducing specific associated symptoms in autism: aggression, self-injury and compulsive behaviours (Nikolov et al. 2006). And third, neuroimaging studies with positron emission tomography (PET) have shown abnormal asymmetry of serot ...
What makes resistance to methicillin heterogeneous?
... synthesis gene tagO from Bacillus subtilis) reduces methicillin resistance and increases the rate of autolysis (Maki et al., 1994). A reduced degree of teichoic acid D-alanine substitution leads to reduced autolytic activity and, concomitantly, the methicillin MIC rises (O’Brien et al., 1995). The r ...
... synthesis gene tagO from Bacillus subtilis) reduces methicillin resistance and increases the rate of autolysis (Maki et al., 1994). A reduced degree of teichoic acid D-alanine substitution leads to reduced autolytic activity and, concomitantly, the methicillin MIC rises (O’Brien et al., 1995). The r ...
Animal Models of human DCG`s
... Lecture Goal – Exam Question You are reading a Times article with a friend and you come across the following statement: “The study hypothesized that some of these susceptibility factors may be allelic variants of genes that govern embryonic serotonin neuron development and that these alleles may co ...
... Lecture Goal – Exam Question You are reading a Times article with a friend and you come across the following statement: “The study hypothesized that some of these susceptibility factors may be allelic variants of genes that govern embryonic serotonin neuron development and that these alleles may co ...