Gene converter - Bioinformatics Platform
... SUMMARY CBS is a very helpful tool when characterizing the binding sites for certain TFs in a regulatory sequence. However, it is not uncommon that other applications deal with a different nomenclature for the genes involved in the study. Thus, it is interesting to use this CBS tool to convert gene ...
... SUMMARY CBS is a very helpful tool when characterizing the binding sites for certain TFs in a regulatory sequence. However, it is not uncommon that other applications deal with a different nomenclature for the genes involved in the study. Thus, it is interesting to use this CBS tool to convert gene ...
Planet Earth and Its Environment A 5000-million year
... organism, where they become part of the new organism’s genetic make-up and are passed on to its offspring. This has only become possible with an advance in the scientific understanding of the structure and functioning of DNA. ...
... organism, where they become part of the new organism’s genetic make-up and are passed on to its offspring. This has only become possible with an advance in the scientific understanding of the structure and functioning of DNA. ...
Structural organization of the malaria mosquito heterochromatin
... portion of the malaria mosquito Anopheles gambiae genome. Methods and Algorithms: Imunostaining of An. gambiae polytene chromosomes was performed using antibodies against Heterochromatin Protein 1 (HP1) and lamin Dm0 Drosophila melanogaster. Physical mapping was done by Cy3, Cy5 labeled PCR amplifie ...
... portion of the malaria mosquito Anopheles gambiae genome. Methods and Algorithms: Imunostaining of An. gambiae polytene chromosomes was performed using antibodies against Heterochromatin Protein 1 (HP1) and lamin Dm0 Drosophila melanogaster. Physical mapping was done by Cy3, Cy5 labeled PCR amplifie ...
Molecular epidemiology - The Battle Against Microbial Pathogens
... The discipline of molecular epidemiology has evolved by merging the boundaries of traditional epidemiology, human and molecular genetics and molecular biology. The genetic epidemiology, falling within the molecular epidemiology, focuses on the use of genetic factors specifically to elucidate epidemi ...
... The discipline of molecular epidemiology has evolved by merging the boundaries of traditional epidemiology, human and molecular genetics and molecular biology. The genetic epidemiology, falling within the molecular epidemiology, focuses on the use of genetic factors specifically to elucidate epidemi ...
expression of key genes related to unspecific
... Aims of the study • Adapt the RT-qPCR method for quantitative analysis of the expression of selected unspecific immune related genes in cod larvae ...
... Aims of the study • Adapt the RT-qPCR method for quantitative analysis of the expression of selected unspecific immune related genes in cod larvae ...
Genetics - TeacherWeb
... • Traits are controlled by genes. • Organisms inherit genes in pairs (2 alleles for every trait – 1 from mom, 1 from dad). • Some genes are dominant, some are ...
... • Traits are controlled by genes. • Organisms inherit genes in pairs (2 alleles for every trait – 1 from mom, 1 from dad). • Some genes are dominant, some are ...
Supplementary Information (doc 33K)
... Supplementary Table 1：Gene-sets significantly associated with narcolepsy The table shows the list of 32 significant gene-sets from both KEGG and the Gene Ontology with FDR 5%. P value was calculated using I(i,j) score. Define indicator I(i,j) = 1 if a sample i carries a CNV overlapping at least one ...
... Supplementary Table 1：Gene-sets significantly associated with narcolepsy The table shows the list of 32 significant gene-sets from both KEGG and the Gene Ontology with FDR 5%. P value was calculated using I(i,j) score. Define indicator I(i,j) = 1 if a sample i carries a CNV overlapping at least one ...
Malaria Fights Back - University of Nottingham
... steadily across the globe. The deadly strains have established themselves in South East Asia and South America, and have recently begun to spread across India and Africa. Formerly under control in many areas, the disease now threatens two billion people living in more than 100 countries. Estimates s ...
... steadily across the globe. The deadly strains have established themselves in South East Asia and South America, and have recently begun to spread across India and Africa. Formerly under control in many areas, the disease now threatens two billion people living in more than 100 countries. Estimates s ...
The percentage of bacterial genes on leading versus
... levels versus genes on leading and lagging strands of E. coli, which has a substantial amount of microarray gene-expression data1. We found that the percentage of genes with similar expression levels on the leading strand increases as the expression level (averaged over all the available experimenta ...
... levels versus genes on leading and lagging strands of E. coli, which has a substantial amount of microarray gene-expression data1. We found that the percentage of genes with similar expression levels on the leading strand increases as the expression level (averaged over all the available experimenta ...
BLAST_and_Genome_Browser_tutorial
... Genome browser is a dynamic graphical display of several features identified from rice as well as from maize, sorghum, barley and wheat that were mapped on the rice genome. Some of these features are sequenced genetic markers, ESTs, cDNAs, CDSs, genes, insertion and repeat elements. The browser is a ...
... Genome browser is a dynamic graphical display of several features identified from rice as well as from maize, sorghum, barley and wheat that were mapped on the rice genome. Some of these features are sequenced genetic markers, ESTs, cDNAs, CDSs, genes, insertion and repeat elements. The browser is a ...
ClusteringLab_2012_ANSWERS
... e. Cluster the data using the left-most button, “Centroid linkage.” The program will generate two new files for you: JobName.cdt and JobName.gtr. Open the .cdt file in Excel. Note that the file is very similar to the input .txt file, except that it contains a) data only for the selected genes b) in ...
... e. Cluster the data using the left-most button, “Centroid linkage.” The program will generate two new files for you: JobName.cdt and JobName.gtr. Open the .cdt file in Excel. Note that the file is very similar to the input .txt file, except that it contains a) data only for the selected genes b) in ...
Host plant resistance – Importance – disease resistance, tolerance
... These pathotypes soon build up in population to create epidemics and eventually the variety is withdrawn. This phenomenon is generally called “ boom and burst”. The avoid the implications of boom and burst phenomenon, use of durable host resistance is advocated in several crops. Durable resistance ...
... These pathotypes soon build up in population to create epidemics and eventually the variety is withdrawn. This phenomenon is generally called “ boom and burst”. The avoid the implications of boom and burst phenomenon, use of durable host resistance is advocated in several crops. Durable resistance ...
The systematic analysis of coding and long non-coding
... calculated using Cufflinks v2.2.1 with default parameters. Any FPKM less than 0.1 was set to 0.1 to avoid ratio inflation. The column ‘type’ is used to differentiate protein-coding genes from lncRNAs. Supplementary Table S3. Differential expression analysis results obtained comparing SCI samples (1M ...
... calculated using Cufflinks v2.2.1 with default parameters. Any FPKM less than 0.1 was set to 0.1 to avoid ratio inflation. The column ‘type’ is used to differentiate protein-coding genes from lncRNAs. Supplementary Table S3. Differential expression analysis results obtained comparing SCI samples (1M ...
DHPS-WDR83 overlapping SNPs detection in QTL region for meat pH
... checking their suitability to be used on the GoldenGate system with a score >0.6 (designability rank = 1). The position of the selected SNPs was precisely defined on porcine genome (version 10.2) allowing to align the location of the studied QTLR, based on the linkage map, to the physical map (Table ...
... checking their suitability to be used on the GoldenGate system with a score >0.6 (designability rank = 1). The position of the selected SNPs was precisely defined on porcine genome (version 10.2) allowing to align the location of the studied QTLR, based on the linkage map, to the physical map (Table ...
Evolution of language: Lessons from the genome | SpringerLink
... and so on, drawing from the growing set of elegant experimental tools and systems that molecular neuroscience has to offer (Fisher & Vernes, 2015). In addition, the mutations that yield speech and language impairments can be directly introduced into cells grown in the laboratory, or into animal mode ...
... and so on, drawing from the growing set of elegant experimental tools and systems that molecular neuroscience has to offer (Fisher & Vernes, 2015). In addition, the mutations that yield speech and language impairments can be directly introduced into cells grown in the laboratory, or into animal mode ...
Appendix A: Gene Annotation
... Generation and phenotypic analysis of transgenic SVC lines Transgenic lines for four SVC genes were generated. CG2081 and CG2444 were chosen because they are two of the infection-induced SVCs not expressed during normal development; CG15203 because of its transient expression in the fat body (a key ...
... Generation and phenotypic analysis of transgenic SVC lines Transgenic lines for four SVC genes were generated. CG2081 and CG2444 were chosen because they are two of the infection-induced SVCs not expressed during normal development; CG15203 because of its transient expression in the fat body (a key ...
Supplementary Information (doc 28K)
... siRNA (Cy). After 24 hours cells were incubated in the presence or absence of hypoxic condition (1%O2, 5%CO2 atmosphere or CoCl2 treatment) for 12 hours. HIF-1 mRNA expression was evaluated by RT-PCR whereas HIF-1 protein level and activity was detected by western blot and ELISA, respectively, as ...
... siRNA (Cy). After 24 hours cells were incubated in the presence or absence of hypoxic condition (1%O2, 5%CO2 atmosphere or CoCl2 treatment) for 12 hours. HIF-1 mRNA expression was evaluated by RT-PCR whereas HIF-1 protein level and activity was detected by western blot and ELISA, respectively, as ...
New Relationships Medline Full (prev. 5 yr)
... Wrong genes not necessarily lead to non-relevant papers. This is probably because we do a good job getting the diseases right. ...
... Wrong genes not necessarily lead to non-relevant papers. This is probably because we do a good job getting the diseases right. ...
Genome Projector: zoomable genome map with multiple views
... biological context for the visualisation and interpretation of data, and serve as a gateway to information stored in a database [2]. For example, the popular two-dimensional genome map viewer, Gbrowse, provides an entry point for browsing the model organism genome database, GMOD [3], and biochemical ...
... biological context for the visualisation and interpretation of data, and serve as a gateway to information stored in a database [2]. For example, the popular two-dimensional genome map viewer, Gbrowse, provides an entry point for browsing the model organism genome database, GMOD [3], and biochemical ...
Updated map of duplicated regions in the yeast genome
... characteristic of what is predicted by the genome duplication/reciprocal translocation model [i.e. properties (i) and (ii) above]. Consequently, the map published by Wolfe and Shields (1997) does not show some gene pairs that may have been formed by the same genome duplication event, but for which t ...
... characteristic of what is predicted by the genome duplication/reciprocal translocation model [i.e. properties (i) and (ii) above]. Consequently, the map published by Wolfe and Shields (1997) does not show some gene pairs that may have been formed by the same genome duplication event, but for which t ...
