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Assembly-Line Enzymology for Polyketide and Nonribosomal
Assembly-Line Enzymology for Polyketide and Nonribosomal

... NRPS-mediated peptide elongations do not use an RNA template. Rather, the identity and ordering of protein domains (Figure 1d) in the synthetase constitutes the template (Figure 6). There are one or two gate-keeping domains in each NRPS module that specify the monomer to be selected and the chiralit ...
The initiation phase of protein synthesis in eukaryotes
The initiation phase of protein synthesis in eukaryotes

... NTD is sufficient for binding to a C-terminal segment of Gcn1p (approximately residues 2050–2400), and overexpressing either domain dissociates the native Gcn1p/Gcn2p complex and produces a Gcn− phenotype that ...
List of abbreviations
List of abbreviations

Identification of the Human Erythrocyte Glucose Transporter (GLUT1
Identification of the Human Erythrocyte Glucose Transporter (GLUT1

... facilitative glucose transporters selectively pump ...
Ribozyme catalysis: not different, just worse
Ribozyme catalysis: not different, just worse

Rhizopus Raw-Starch-Degrading Glucoamylase: Its
Rhizopus Raw-Starch-Degrading Glucoamylase: Its

... CDNAlibrary prepared from Rhizopus mRNA.Sequence analysis of both glucoamylase genes revealed that the genomic gene contained 4 intervening sequences and the CDNAgene lacked 145 nucleotides corresponding to the N-terminal region. The glucoamylase consists of 604 amino acids including a putative sign ...
Enzyme Mechanisms
Enzyme Mechanisms

... Acid-base catalysis at histidine in steps 2 and 4 Covalent catalysis on serine hydroxymethyl group in steps 2-5 So both chemical (acid-base & covalent) and binding modes (proximity & transition-state) are used in this mechanism 11/5/2009 Biochem: Enzymes IV ...
Structure of ATP-Bound Human ATP:Cobalamin
Structure of ATP-Bound Human ATP:Cobalamin

... Loss of AdoCbl results in methylmalonic aciduria (MMA), a buildup of methylmalonic acid in body fluids, including blood and urine (12, 16). Mutations in three different genetic loci, cblA, cblB, and mut, specifically result in AdoCbl deficiency. Methylmalonyl CoA-mutase is encoded at the mut locus ( ...
The Amino Acid Sequences of the Myelin
The Amino Acid Sequences of the Myelin

... that specifically cross-reacted with the M10 fusion protein (immobilized on nitrocellulose paper) were isolated from the polyclonal MAG antiserum. The reactivity of the affinitypurified antibodies was then compared with GEN S-3, an anti-MAG monoclonal antibody (31), on immunoblots (Fig. 2). Both ant ...
Ovid: Parenteral administration of different amounts of branch
Ovid: Parenteral administration of different amounts of branch

... sepsis definition [13], who were in need of parenteral nutrition within the first three days of ICU admission and for at least 11 days, were entered into the study. Severity of illness was assessed by means of the Acute Physiology and Chronic Health Evaluation (APACHE) II score [14]. APACHE II score ...
Types and effects of protein variations. Vihinen
Types and effects of protein variations. Vihinen

... large proportion appears in protein coding DNA and RNA sequences, although the proteincoding regions constitute only about 1.3 % of human genome. Due to the large number of different functions in which proteins are involved, also the effects of variants are widely different. In addition to functions ...
Structure, function, and evolution of phosphoglycerate mutases
Structure, function, and evolution of phosphoglycerate mutases

... part containing 14 residues of the enzyme has a large degree of ¯exibility and its presence was not observed in any of the structures reported to date, except for the recent complex structure with 3PGA substrate where a part of this tail was located (Crowhurst et al., 1999). Based on the later studi ...
Comparative proteomic network signatures in seminal plasma of
Comparative proteomic network signatures in seminal plasma of

... improving tolerance towards paternal antigens [6]. In addition, an increasing number of seminal plasma proteins, such as insulin-like growth factor-I, alpha2-macroglobulin and the encephalin degrading enzymes, have been shown to be associated with sperm motility [7–9]. A common end to numerous pathw ...
magamtol talalt cikkek
magamtol talalt cikkek

... The sequences of two Drosophila and one rabbit protein phosphatase (PP) 1 catalytic subunits were determined from their cDNA. The sequence of Drosophila PP1 alpha 1 was deduced from a 2.2-kb cDNA purified from an embryonic cDNA library, while that for Drosophila PP1 beta was obtained from overlappin ...
Expanding the Genetic Code
Expanding the Genetic Code

... amide bond by intramolecular acyl transfer reactions (Figure 3 c).[53] An ingenious strategy termed “native chemical ligation” obviates the need for such a template and allows the direct coupling of peptide fragments to form a native peptide linkage (Figure 3 d).[54, 55] In this method, a peptide wi ...
E. coli
E. coli

...  The property that distinguishes these two groups is the presence of the EPEC adherence factor plasmid (pEAF), which is only found in tEPEC  aEPEC strains are emerging enteropathogens that have been detected worldwide  The large variety of serotypes and genetic virulence properties of aEPEC strai ...
Annex 1
Annex 1

... (ii) sequences which are included are any unbranched sequences of four or more amino acids or unbranched sequences of ten or more nucleotides. Branched sequences, sequences with fewer than four specifically defined nucleotides or amino acids as well as sequences comprising nucleotides or amino acids ...
N-terminal portion acts as an initiator of the inactivation of pepsin at
N-terminal portion acts as an initiator of the inactivation of pepsin at

... The most obvious differences between pepsin and pepsinogen are found in the prosegment portion. Not only does the prosegment cover the active site cleft, but it contains a large number of positively charged residues, i.e. 13 (nine Lys, two Arg, two His) out of the 44 residues in the prosegment of pe ...
NSPKU
NSPKU

... Why does a person with PKU need to take a protein substitute? • A protein substitute is a specially made medical supplement, which can come in various formats like a drink, a gel or tablets. • A protein substitute contains NO Phe... But it contains all of the other amino acids in protein that your ...
Amino acid specificity in translation
Amino acid specificity in translation

... with O30 different unnatural amino acids have been successfully incorporated into protein [9]. Together, these data suggest that the translational apparatus lacks specificity for different amino acids, once they are esterified onto tRNA. In a few isolated cases, however, the translation machinery se ...
Dietary protein for athletes - Inside Outside Wellness Center
Dietary protein for athletes - Inside Outside Wellness Center

... lower than that seen with lower-quality proteins. In addition, the intensity of the exercise performed by the subjects in studies in which protein requirements were elevated (Friedman and Lemon 1989; Lemon et al. 1992; Meredith et al. 1989; Tarnopolsky et al. 1988, 1992) was greater than that in stu ...
Ars Pharmaceutica - Facultad de Farmacia
Ars Pharmaceutica - Facultad de Farmacia

... of earthworm meal protein post-hydrolysis. Materials and Methods: In lab cultivated earthworms (Eisenia andrei) were reduced to flour which was then hydrolyzed with 6M HCl at 110 °C for 24 hours in a closed system. The hydrolysis product was neutralized and their aa were derivatized with 6-aminoquin ...
AMINO ACID SEQUENCE ANALYSIS OF HUMAN INTERLEUKIN 1
AMINO ACID SEQUENCE ANALYSIS OF HUMAN INTERLEUKIN 1

Molecular Record – evidence for common ancestry
Molecular Record – evidence for common ancestry

... Molecular Record – evidence for common ancestry Scientists can examine the amino acid sequences of particular protein molecules found in vertebrates to determine the degree of similarity between vertebrate species. Even organisms that appear to have few physical similarities may have similar sequenc ...
Evolution of Function in Protein Superfamilies, from a Structural
Evolution of Function in Protein Superfamilies, from a Structural

... between homologues based on an incorrect functional assignment would ultimately undermine the value of genome databases. There are two ways to help practically to improve genome analysis. Firstly, one can assess quantitatively the reliability of annotation transfer, and recent work has provided valu ...
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Ribosomally synthesized and post-translationally modified peptides

Ribosomally synthesized and post-translationally modified peptides (RiPPs), also known as ribosomal natural products, are a diverse class of natural products of ribosomal origin. Consisting of more than 20 sub-classes, RiPPs are produced by a variety of organisms, including prokaryotes, eukaryotes, and archaea, and they possess a wide range of biological functions.As a consequence of the falling cost of genome sequencing and the accompanying rise in available genomic data, scientific interest in RiPPs has increased in the last few decades. Because the chemical structures of RiPPs are more closely predictable from genomic data than are other natural products (e.g. alkaloids, terpenoids), their presence in sequenced organisms can, in theory, be identified rapidly. This makes RiPPs an attractive target of modern natural product discovery efforts.
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