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Honors Chemistry Summer 2015 Biochemistry Answer these questions in ways that show your understanding. Do your best to avoid simply copying sentences from your notes or text. Most questions can be answered from the notes or text, but a few require further research. A few are for you to figure out on your own! You may type on this document and send it back to me, or you may create your own new document with just your answers. A reminder: as you work on questions that require Internet research, be very careful that you do not copy & paste information. That would be plagiarism. Read about the topic and work on understanding it. Then write answers in your own words, reflecting your own new knowledge. Section 1: Carbon Compounds 1. How do inorganic and organic compounds differ? 2. How do carbon’s bonding properties contribute to the existence of a wide variety of biological molecules? 3. What role is played by functional groups in molecules? 4. How are monomers, polymers, and macromolecules related to each other? 5. How is polymer broken down into its subunits (monomers)? 6. Condensation reactions are also referred to as dehydration synthesis. Explain how the name dehydration synthesis fits this process. (Consider the name and the meanings of the individual words.) Section 2: Molecules of Life Carbohydrates: 1. Why is the word “carbohydrate” a good name for molecules like glucose? 2. Compare the structure of monosaccharides, disaccharides, & polysaccharides, and give an example of each. 3. Explain how the term isomer relates to monosaccharides. 4. For the three simple sugars listed in your notes, look up where they are found and list them here. Proteins 1. How do amino acids differ from one another? 2. Two different examples of simple R-groups were given in your notes. Look up some diagrams of other amino acids and notice the variety of R-groups. Write three more names and the R-groups of some more complicated amino acids. (Do your best to type the elements of the R group. In this case, you may copy a picture of the R-group, in addition to your typing.) 3. The bonding of amino acids into a long chain is just the first step in the formation of a protein. The simple chain of amino acids is called the “Primary Structure.” Do some research to summarize what happens as the protein structure becomes more complex: Primary structure: the sequence of amino acids. Secondary structure: Tertiary structure: Quaternary structure: two or more protein molecules bond to each other to form a larger complex. 4. When a protein is made in a living cell, the folding into secondary structures etc happens spontaneously. However, conditions such as heat, or mechanical forces can change those structures. For example, this is what happens to the protein in the white of an egg when it is cooked. Here is a list of events in which the structure of a protein changes, although the sequence of amino acids remains the same. Choose one of them to explain. (Do some research. Contact me ahead of the due date if you are stuck, and I can direct you to some helpful websites.) The white of an egg solidifies when it is heated. The white of an egg thickens when it is beaten (as when making meringue.) Substances in egg yolk can allow oil and water to mix. Heat from a curling iron curls hair. Chemicals in a perm can hold curls in hair. 5. When you eat foods high in starch and/or protein, why do you need plenty of water to digest those nutrients?