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Name: __________________________________________________ TEST DATE: __________________________ Per: ______ 1. Study Guide for Final Exam - Ecology, Chemistry of Life, Cell Biology, Molecular Genetics, Heredity Sketch replication (at the replication fork). Label all strands and indicate direction (5’, 3’) 2. Thee following is a food web for a meadow habitat that occupies 25.6 km2. The primary producers’ biomass is uniformly distributed throughout the habitat and totals 1,500 kg/km2. Developers have approved a project that will permanently reduce the primary producers’ biomass by 50 percent and remove all rabbits and deer. What will most likely happen to each species at the completion of the project? 3. For the diagram describe what changes are seen as time progresses. For each species explain why they disappear or appear over time. 4. The gene encoding ß -galactosidase, lacZ, in E. coli is part of a coordinately regulated operon containing other genes required for lactose utilization. Correctly Describe/sketch/label the interactions at the lac operon when lactose IS and IS NOT being utilized? (The legend below shows the shapes of the molecules you should use in your drawing.) 1 Name: __________________________________________________ TEST DATE: __________________________ Per: ______ 5. An experiment to measure the rate of respiration in crickets and mice at 10°C and 25°C was performed using a respirometer, an apparatus that measures changes in gas volume. According to the data, the mice at 10°C demonstrated greater oxygen consumption per gram of tissue than did the mice at 25°C. Why is this? According to the data, the crickets at 25°C have greater oxygen consumption per gram of tissue than do the crickets at 10°C. Why is the trend in oxygen consumption of the mice different to the trends in oxygen consumption among crickets and? 6. Paramecia are unicellular protists that have contractile vacuoles to remove excess intracellular water. In an experimental investigation, paramecia were placed in salt solutions of increasing osmolarity. The rate at which the contractile vacuole contracted to pump out excess water was determined and plotted against osmolarity of the solutions, as shown in the graph. Give an explanation for the graph. (use hypotonic/hypertonic/isotonic concepts) 7. Describe how Sickle-cell Anemia is caused at the DNA and Protein level: 8. In a transformation experiment, a sample of E. coli bacteria was mixed with a plasmid containing the gene for resistance to the antibiotic ampicillin (ampr). Plasmid was not added to a second sample (Wild-type). Samples were plated on nutrient agar plates, some of which were supplemented with the antibiotic ampicillin. The results of E. coli growth are summarized below. The shaded area represents extensive growth of bacteria; dots represent individual colonies of bacteria. EXPLAIN the results of EACH PLATE (I, II, III, IV) 9. Describe hydrolysis and dehydration reactions of nucleic acids, amino acids, lipids and carbohydrates. 2 Name: __________________________________________________ TEST DATE: __________________________ Per: ______ 10. Describe the steps in Cellular Respiration. Where does each happen? Which require Oxygen? a. b. c. d. 11. The following shows 3 crossed found in a species of flower. The data does not show simple dominance or a predictable pattern. What are some reasons this may be? 12. The chemical reaction for photosynthesis is If the input water is labeled with a radioactive isotope of oxygen, 18O, then the oxygen gas released as the reaction proceeds is also labeled with 18O. Describe the movement of water throughout respiration. 13. The figure above shows several steps in the process of bacteriophage transduction in bacteria. How does the bacteriophage change the genetic information of the bacteria? 14. Figure I to the left shows the growth of an algal species in a flask of sterilized pond water. If phosphate is added as indicated, the growth curve changes as shown in Figure II. Predict algal growth if nitrate is added instead of phosphate? In what form do plants use nitrogen, at what stage of the nitrogen cycle is this? 3 Name: __________________________________________________ TEST DATE: __________________________ Per: ______ 15. Use the graph above to calculate the mean rate of population growth (individuals per day) between day 3 and day 5. Give your answer to the nearest whole number. (how do you calculate rate?) 16. In a certain species of flowering plant, the purple allele P is dominant to the yellow allele p. A student performed a cross between a purple-flowered plant and a yellow-flowered plant. When planted, the 146 seeds that were produced from the cross matured into 87 plants with purple flowers and 59 plants with yellow flowers. Calculate the chi-squared value for the null hypothesis that the purple-flowered parent was heterozygous for the flowercolor gene. Give your answer to the nearest tenth. OBS EXP OBS-EXP (OBS-EXP)2 (OBS-EXP)2/EXP 17. How much carbon (in g/m2) is released into the atmosphere as a result of the metabolic activity of herbivores? Give your answer to the nearest whole number. 18. Fruit flies (Drosophila melanogaster) with a wild-type phenotype have gray bodies and red eyes. Certain mutations can cause changes to these traits. Mutant flies may have a black body and/or cinnabar eyes. To study the genetics of these traits, a researcher crossed a true- breeding wild-type male fly (with gray body and red eyes) with a true- breeding female fly with a black body and cinnabar eyes. All of the F1 progeny displayed a wild-type phenotype. Female flies from the F1 generation were crossed with true-breeding male flies with black bodies and cinnabar eyes. The table below represents the expected outcome and the data actually obtained from the cross. Explain the difference between the expected data and the actual numbers observed. 4 Name: __________________________________________________ TEST DATE: __________________________ Per: ______ 19. A population of microscopic eukaryotic organisms growing in a large flask had the growth pattern shown. Explain the biological factors that determine the shape of the growth pattern shown above in both period 1 and period 2. 20. Membrane-bound organelles have been an important component in the evolution of complex, multicellular organisms. Explain why eukaryotic cells having internal membranes may provide an advantage over prokaryotic organisms. 21. Illustrate a dipeptide and an amino acid in as they would appear before and after forming a tripeptide as a result of dehydration reaction? What functional groups identify an amino acid? What is lost? 22. The sequences for two short fragments of DNA are shown above. How do they two segments differ in base pair differences? How would this affect their structure? How are the bonds that hold them together make them different structurally? 23. During the infection cycle for a typical retrovirus, such as HIV, which uses RNA as genetic material, How would the genetic variation in the resulting population of new virus particles be differ from the original? Why? 24. A sample of human blood was placed in a test tube containing a physiological saline solution (0.9% sodium chloride). This type of solution is often used intravenously to quickly rehydrate patients. A drop of the blood from the test tube was placed on a slide and red blood cells (RBCs) were observed under a microscope. Which of the pictures in the following diagram predicts the likely microscope view the laboratory worker would see? Explain why? 5 Name: __________________________________________________ TEST DATE: __________________________ Per: ______ 25. The regulatory sequences of the operon controlling arabinose metabolism (ara operon) were studied to determine whether bacteria can respond to changes in nutrient availability. It is predicted that if those regulatory sequences are functioning properly, the bacteria will produce the enzymes involved in arabinose metabolism (structural genes B, A, and D) in the presence of arabinose. If a gene that encodes a green fluorescent protein (GFP) is substituted for the structural genes of the operon, activation of the regulatory sequences can be assayed by GFP expression. A culture of E. coli cells underwent a transformation procedure with a plasmid containing the regulatory sequences of the ara operon directly upstream of the gene encoding the GFP. The plasmid also confers ampicillin resistance to bacteria. Samples were then plated on different types of culture media. (Note: The GFP fluoresces only under UV light, not under white light.) The table below shows the results. Why is the GFP expressed by E. coli cells after transformation with the plasmid? 26. What are the figures below demonstrating? 27. What percent of the biomass in the forest community represented above is tied up in the shrub layer? Give your answer to the nearest whole number. 6 Name: __________________________________________________ TEST DATE: __________________________ Per: ______ 28. What determines the primary, secondary and the tertiary structure and function of a polypeptide? 29. How many different genotypes are possible from the cross AaBb × AaBb? 30. Describes allosteric inhibition of an enzyme? 31. The occurrence of a particular genetic condition in a family is shown in the pedigree above. What is the most likely inheritance pattern for the individuals with the condition? Squares represent males, circles represent females, and shaded symbols represent individuals who exhibit the condition. 32. Describe how the steps in the experiments by Meselson and Stahl demonstrated semiconservative replication? 33. Milk kept past the expiration date often spoils, tastes sour, and develops stringy curds. What can explain the reason? 34. What occurs in both fermentation and aerobic cellular respiration? 35. Define: a. Nonsense codon b. Anticodon c. Ribosome d. Exon e. Poly-A tail f. plasmids 7 Name: __________________________________________________ TEST DATE: __________________________ Per: ______ 36. For each of the following, state at what stage of cell division you would find these chromosomes (meiosis or mitosis) a. Unpaired unreplicated linear chromosomes b. Unpaired replicated linear chromosomes c. Paired replicated linear chromosomes 37. In similar rocky coastal ecosystems where sea otters have disappeared due to human harvesting or killer whale predation, the kelp forests also disappear and the species diversity of the community decreases drastically. In these ecosystems, the sea otter can best be described as a 38. What creates cohesion is water? Illustrate this. 39. What do ATP, DNA, and RNA have in common? 40. Fill in the chart for the following 4 major groups of organic compounds: Proteins Carbohydrates Nucleic Acids Lipids Example monomers Example polymers Reaction that joins monomers Reaction that separates polymers Some major functions 8 Name: __________________________________________________ TEST DATE: __________________________ Per: ______ 41. Label the structures of the cell membrane in the picture, identify the function of the parts. 42. Describe each molecule to the right 43. A culture of white-eyed fruit flies (Drosophila melanogaster) was maintained for many generations. Females from the stock white-eyed culture were crossed with red-eyed (wild-type) males. The F1 females were crossed with the whiteeyed males from the original culture. The resulting phenotypes of the progeny are summarized below. Parental Generation Cross F1 Generation (at least 500 flies) White-eyed females x red-eyed males 100% of females are red-eyed 100% of males are white-eyed F1 Generation Cross F2 Generation (at least 500 flies) F1 red-eyed females x white-eyed males 50% of females are red-eyed and 50% are white-eyed 50% of males are red-eyed and 50% are white-eyed a. Why are there red-eyed F1 females? b. Why are there white-eyed females in the F2 generation? 9 Name: __________________________________________________ TEST DATE: __________________________ Per: ______ 44. In a diploid organism with the genotype AaBBCCDDEE, how many genetically distinct kinds of gametes would be produced through meiosis? 45. In female cats the genotype BB is black. Bb is tortoise shell. and bb is yellow. The locus of this pair of alleles is on the X chromosome. If a tortoise-shell female is crossed with a black male what would be the expected phenotypic ratios in the different kinds of offspring? 46. 47. What happens during crossover? In humans, red-green color blindness is a sexlinked recessive trait. If a man and a woman produce a color-blind son, what the phenotypes and genotypes of the parents? 48. The following questions refer to the birth of a child with blood type A to a mother with blood type B a. The father must have what blood type? b. If the father has blood type AB, what must the mother be? 49. If 2n = 24 for a particular cell, then the chromosome number in each cell after meiosis would be ____. Why is this? 50. Zebrafish in a certain population have been infected by a virus that has inserted its genome in the middle of the gene Wdr68. Wdr68 has been shown to be involved in regulating the transcription of genes that are important for jaw development in the fish. One particular way in which scientists believe Wdr68 is able to do this is by interacting with a partner protein that binds to the promoter region of the necessary genes to promote transcription. The mutant form of Wdr68 is no longer able to interact with this partner protein and downstream processes are unable to occur. (a) Describe the most likely effects on cellular processes (be specific as to which processes and molecules are most likely to be directly affected). ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ 10 Name: __________________________________________________ TEST DATE: __________________________ Per: ______ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ (b) Describe and explain the most likely effects on individual affected zebrafish. ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ (c) Since the virus has only affected some fish, and there are still healthy Wdr68 alleles in the population, how do you think the mutation will spread throughout the zebrafish population? Justify your prediction. ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ ________________________________________________________________________________________________________________________ 11