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Chronic Immune Dysfunction and Inflammatory State, Infection(s), Neurological, Endocrine, Mitochondria, and Oxidative Stress Cycles HPA Axis Dysfunctional state from infections, chronic inflammation, toxins, and oxidative and nitrosative stress damage. Effects of chronic stress . Adrenal Exhaustion and Dysfunctions. Thyroid, Hypothalmus and Pituitary dysfunctions. Cortisol, DHEA, CRH, ACTH, GH, Dopamine, Oxytocin, and Melatonin abnormalities. Sleep disorder. Excessive Reverse T3. Ion channel interruption & dysfunctions. Genetic susceptibilities. Deficient ATP effects. Dysfunctional Feedback Oxidative and Nitrosative stress. Inflammation & Damage ATP Deficiency Vital Cellular and Mitochondria nutrients Depletion of antioxidant status through oxidative and nitrosative stress Deficiency of Magnesium, Co-Q10, D-Ribose, Carnitine, NAD, Sulphur, Zinc, Phospholipids, Omega-3 fats, Vitamin B complex and C, SOD, Glutathione. Methylation cycle blockage effects. Lack of clean filtered water in the diet Blockages in circulation and microcirculation affecting nutrient uptake and by-product excretion. Antioxidant Genetic factors. Pathogen and Toxin Load Factors Virus(es) / Lyme / Chlamydia / Mycoplasma / Bacteria / Parasites. Microbiota of bacteria which include L-form, biofilm, and intracellular bacterial forms (Dr. Marshall). Triggering agent / perpetuating factor in illness. Reactivated latent pathogens. Inflammatory nm immune system, chronically activated. Mold and Mycotoxins & chronic inflammation. Organophosphates, heavy metals, additives, various toxins. Detoxification failure. Blood brain barrier breached. Oxidative and Nitrosative stress, increased COX2, TNF-a , ROS, NOS, Peroxynitrite loop (Dr. Martin Pall). VDR deficiency (Dr. Marshall). Methylation cycle blockage. Microbes & their genes. Intestinal dysbiosis, increased LPS, H2S. Sleep disorders. Blockages in circulation and micro-circulation affecting nutrients uptake and by product excretion. Genetic weaknesses. . Oxidative and Nitrosative stress. Inflammation & Damage Nutritional Deficiency Effects on Heart, Muscles, Liver & Intestines Oxidative and Nitrosative stress. Inflammation & Damage ATP Deficiency Mitochondria and Krebs cycle Oxidative & Nitrosative stress damage to inner & outer membranes, cristae, proteins, and DNA of mitochondria. Krebs cycle blocks. Redox failure. Ion channel interruption & dysfunctions affecting Ca. Mg. and K levels. Deficient Electron Transport Chain. Impaired ATP production and Oxidative Phosphorylation. Impaired Translocator protein activity. Acceleration of AMP & glycolysis. Methylation cycle blockages effects. Deficient ATP production. ATP Deficiency Excess demand for ATP. Oxidative and Nitrosative stress. Inflammation & Damage Nervous System Neurotoxic state from infection(s), toxins, autoimmune disease. Blood brain barrier breached. Poor blood and oxygen delivery to brain due to heart malfunction caused by mitochondria dysfunction. Inflammatory cytokines and inflammatory and oxidative damage to the nervous system and depletion of vital neurotransmitters, hormones & signalling systems. Brain hypoperfusion. Microglia activation. Brain lesions. EEG abnormalities. Astrocyte dysfunction. ANS dysfunction. Ion channel dysfunctions. Neurological Gating deficits. Impaired cerebral glucose metabolism. Excess Quinolic acid, ROS & NMDA activity. GABA depletion. Abnormal proteins in spinal fluid. ATP down effects. Oxidative and Nitrosative stress, Inflammation & Damage Immune System Dysfunctional Feedback Dysfunctional, depleted and chronically activated immune system. Excessive inflammatory cytokines and damage. RnaseL and PKR abnormalities, Ion channel interruption & dysfunctions. Interferon poisoning. Depleted Suppressor T cells & overactive immune system. VDR deficiency (Dr. Marshall). Increased nuclear factor-κB, COX2, TNF-a and loss of p53. NK cell dysfunction & abnormalities. B cell abnormalities. Fighting chronic infection(s) /allergens / mycotoxins. Progression to autoimmune factors and responses. Intestinal dysbiosis and LPS effects on immune system. Methylation cycle blockage effects on immunity. Genetic susceptibilities. Deficient ATP effects on Immunity system.