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SOS - Dynamic operating
system for sensor networks
Simon Han, Ram Kumar, Roy Shea,
Eddie Kohler and Mani Srivastava
http://nesl.ee.ucla.edu/projects/sos
Modified for Yale EENG 460a Lecture 4
Andreas Savvides
(09/08/05)
Mobisys 2005
1
Minimal Program on an Embedded Processor
int main(void)
{
Init_All();
for (;;) {
IO_Scan();
IO_ProcessOutputs();
KBD_Scan();
PRN_Print();
LCD_Update();
RS232_Receive();
RS232_Send();
TIMER_Process();
}
// should never ever get here
}
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// bar-code scanner
// keyboard
// printer
// display
// serial port
// timer
2
Programming an embedded
processor
 What are the problems with the previous
code fragment?
 Some things about programming
microcontrollers
 No memory management unit – be careful with
memory usage/protection
 Need to worry about peripherals
 Need to decide where to locate code on the
microcontroller memory
 Why does OS make a difference?
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3
Some Background…
 TinyOS
 NesC
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4
Re-programming Challenges
 Severe resource constraints on nodes
 4 KB RAM, 128 KB FLASH, 2 AA batteries
 Avoiding crashes
 Unattended operation - Crashed node is useless
 No architecture support for protection e.g. MMU
 Balancing flexible and concise updates
 Update applications, services and drivers
 Energy efficient distribution and storage
 Why do you need reprogrammability?
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Sensor Network OS State of the Art
 TinyOS - Application specific OS




Application, OS and drivers are NesC components
Select app components, statically analyze and optimize
Extensive set of well-tuned components
Supports full binary upgrades
 Maté - Application specific Virtual Machine




Domain specific bytecode interpreter on TinyOS
Programs are small scripts containing VM instructions
Better suited for application specific tuning
Interpreter updates require fallback to TinyOS
 Others: Mantis, VM*
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Towards general purpose sensor OS
 TinyOS and Maté
 Application and OS are tightly linked
 Design Goal: An application independent sensor OS
 Independently written & deployed apps run on one network
 Towards traditional kernel space/user space programming
model
 Re-programming via binary modules
 Risk: Lose safety provided by static analysis or dynamic
interpreter
 Design Challenge
 Provide general purpose OS semantics on resource
constrained embedded sensor nodes
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SOS Operating System
 Dynamic operating system for sensor networks
 Kernel and dynamically-loadable modules
 Ported to Mica2, MicaZ, XYZ and Telos
 Convenient, yet compact, kernel interface
 Dynamic function links - 10 bytes overhead/function
 Safety features through run-time checks
 Type safe linkage, Memory overflow checks
 Performance
 No worse than TinyOS for real world applications
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Contributions
 Framework for binary modular re-programming
 Dynamic linking
 Message Passing
 Dynamic Memory
 Inexpensive safety mechanisms for an embedded OS




Type safe linking
Monitored memory allocation
Garbage collecting scheduler and error stub
Watchdog mechanism
 General purpose OS semantics on sensor nodes
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9
Architecture Overview
Tree Routing
Module
Data Collector
Application
Photo-sensor
Dynamically
Module
Loaded modules
Static SOS Kernel
Dynamic
Memory
Message
Scheduler
Dynamic
Linker
Kernel
Components
Sensor
Manager
Messaging
I/O
System
Timer
SOS
Services
Device
Drivers
* - Drivers adapted from TinyOS for Mica2
Radio*
I2C
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ADC*
10
SOS Overview
 Programmed entirely in C
 Co-operatively scheduled system
 Event-driven programming model
 System provides no memory protection
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11
Designing Safety Features
 Dynamically evolving system
 Unspecified behavior resulting from transient states
 Goals
 Ensure system integrity
 Graceful recovery from failures
 Design
 Minimal set of run-time checks
 Designed for low resource utilization
 Does not cover all failure modes
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Installing Dynamic Modules
 Modules implement specific function or
task
FLASH Layout
 Position independent binary
 Loader stores module at arbitrary
program memory location
 Minimal state maintenance
 8 bytes per module
 Stores module identity and version
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SOS Kernel
<Empty Space>
Module 1
<Empty Space>
Bootloader
13
Inter-module Communication
Module A
Dynamic
Linking
Module B
Module Function
Pointer Table
Module A
Message
Passing
Module B
Message
Buffer
 Dynamic Linking
 Synchronous communication
 Blocking function calls that
return promptly
 Message Passing
 Asynchronous communication
 Long running operations
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Dynamic Linking Overview
 Goals
 Low latency inter-module communication comparable
to direct function calls
 Functional interface is convenient to program
 Challenges
 Safety features to address missing and updated
modules
 Constraints
 Minimize RAM usage
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Dynamic Linking Design




Publish functions for the other parts of system to use
Subscribe to functions supplied by other modules
Indirection provides support for safety features
Dynamic function call overhead
 21 cycles compared to 4 cycles for direct function call
Publish
Subscribe
Module B
Module A
<foo, B, FOO_ID, Type>
Function Control Block Table (FCB)
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Dynamic Linking Safety Features
Module A
Module B
<foo, B, FOO_ID, Type>
Function Control Block Table
Error Stub
 Run-time Type Checking
 Module updates can introduce new function prototype
 Type mismatches are detected, error flag is raised
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17
Message Passing System
Data Collector
Application
Inter-module
communication
Kernel - module
communication
System
Timer
System Scheduler
Tree Routing
Module
MESSAGE
<Dest. Addr>
<Dest. Mod. Id>
<Message Type>
<Payload> …
 Scheduler looks up handler of destination module
 Handler performs long operations on message payload
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Messaging Safety Features
 High priority messaging




Signal timing sensitive events (For e.g. hardware interrupts)
Prevent interrupt chaining into the modules
Concurrency management by kernel
Eliminates race conditions in modules
 Watchdog support
 Co-operatively scheduled system
 Long running message handlers trigger watchdog reboot
 Kernel terminates execution of the buggy module
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Module-Kernel Communication
System Call
System
Jump table
Data Collector Module
SOS
Kernel
HW specific API
System Messages
Priority
Scheduler
Interrupt Service
Hardware




Kernel services available as system calls
Jump table redirects system calls to handlers
Update kernel independent of modules
System Call Overhead - 12 clock cycles
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Dynamic Memory Allocation
 Need to allocate module state at run-time
 Design Choice - Fixed-partition allocation
 Performance - Constant low allocation time (69 cycles)
 Resources - 1 byte overhead per block, 52 blocks
 SOS provides memory safety features
 Guard bytes detect memory overflow
 Ownership tagging to track buggy modules
Guard Byte
16 byte blocks
32 byte blocks
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128 byte blocks
21
Garbage Collection
 Memory leakage problem
 Garbage collection on failed message delivery
 Destination module needs to signal ownership
 Use the return code of the message handler
 SOS_OK - Kernel frees the dynamic memory
 SOS_TAKEN - Destination module owns memory
Module A
Message Passing
Module B
Message
Payload
Dynamic
Memory
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Surge: What does it do?
 Small application that organizes nodes in a
spanning tree, rooted at the basestation
 Based on broadcast messages
 Each node maintains the ID of its parent and its
depth in the tree
 Depth advertised with every message
 Nodes select their parents as the nodes with
the least depth – and best signal
 Root initiates the creation of the spanning
tree by periodically broadcasting messages
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Evaluation
 Design Goal
 Provide general purpose OS semantics
 Low resource utilization
 Hypothesis
 Performance no worse TinyOS
 Update cost closer to Maté
 Experiment Setup
 Surge data collection and tree routing on 3 hop network
 Low duty cycle application
 Mica2 motes: AVR 8-bit microcontroller
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Application Performance Comparison
 Application performance is nearly identical for
TinyOS, SOS and Mate
Packet Delivery Ratio
Data Transfer Delay
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Performance Overhead
Active Time (%)
TinyOS
SOS
Maté
4.58%
4.64%
5.13%
29.94
30.02
Average Power(mW) 29.92
 CPU Active Time - Metric to measure OS overhead
 Measured by profiling Surge for 1 min. on real nodes
 Averaged over 20 experiments for each system
 SOS has 1% overhead relative to TinyOS
 Surge has minimal application level processing (“worst” case OS
overhead)
 Insignificant variation of average power consumption
 Surge application has a very low CPU utilization
 System level energy: E(CPU) << E(Radio)
 Duty Cycling - Idle energy dominates over active energy
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26
Update Costs
Method
Energy
Entire binary upgrade (TinyOS) 784.14 mJ
Cost
High
Modular binary upgrade (SOS)
Virtual Machine scripts (Maté)
Moderate
Low
12.25 mJ
0.34 mJ
 Re-programming cost involves
 Communication Energy - Transfer the new code
 Storage Energy - Write the code to RAM/FLASH etc.
 Impact on system level energy




Depends significantly upon frequency of updates
Difference in update cost amortized over the interval between updates
Idle energy in the interval between updates dominates
Idle energy consumption does not depend on the OS
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27
Lessons Learnt
 Focus on duty cycling all parts of the system
 Standardize the API for power management of peripherals
 Performance optimization of the CPU is secondary
 Account for update energy and frequency
 Choose an OS based on the features it provides
 SOS - Flexibility of general purpose OS semantics
 TinyOS - Full system static analysis
 Mate VM - Efficient scripting interface
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28
Future Work
 New models for application development
 Independent re-usable loadable binary modules
 Hierarchy of re-configuration
 Maté VM ported to SOS - Extensible virtual machines
 Upgrade SOS kernel using TinyOS whole image technique
 Staged checkers
 Combination of static and run-time checks for code safety
 FLASH wear and tear management using SOS
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29
Programming
 Programmed in C
 Function Registration
 char tmp_string = {'C', 'v', 'v', 0};
 ker_register_fn(TREE_ROUTING_PID,
MOD_GET_HDR_SIZE,
tmp_string,(fn_ptr_t)tr_get_header_size);
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Network Capable Messages
typedef struct {
sos_pid_t did;
sos_pid_t sid;
uint16_t daddr;
uint16_t saddr;
uint8_t type;
uint8_t len;
uint8_t *data;
uint8_t flag;
} Message;
//
//
//
//
//
//
//
//
destination module ID
source module ID
destination node
source node
message type
message length
payload
options
 Messages are best-effort by
 Messages are filtered when
default.
received.
 No senddone and Low priority
 Can be changed via flag in
runtime
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 CRC Check and Non-promiscuous
mode
 Can turn off filter in runtime
31
SOS Messaging API
// send message over net
int8_t post_net(
sos_pid_t did,
sos_pid_t sid,
uint8_t type,
uint8_t length,
void *data,
uint8_t flag,
uint16_t daddr);
// send long message
int8_t post_long(
sos_pid_t did,
sos_pid_t sid,
uint8_t type,
uint8_t length,
void *data,
uint8_t flag);
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// send message
int8_t post(Message *msg);
// short message struct
typedef struct {
uint8_t byte;
uint16_t word;
} MsgParam;
// send short message
int8_t post_short(
sos_pid_t did,
sos_pid_t sid,
uint8_t type,
uint8_t byte,
uint16_t word,
uint8_t flag);
32
Messaging Example: Ping_pong
enum {
MSG_LONG_BALL = MOD_MSG_START,
MSG_SHORT_BALL = (MOD_MSG_START + 1),
};
enum {
PLAYER1_PID = DFLT_APP_ID0,
PLAYER2_PID = DFLT_APP_ID1,
};
typedef uint8_t ball_t;
typedef struct {
ball_t next_seq;
} player_t;
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Messaging Example: Ping_pong
int8_t player(void *state, Message *msg){
player_t *s = (player_t*)state;
switch (msg->type){
case MSG_INIT:
{
//! initialize the state
s->next_seq = 0;
//! start with short ball
if(msg->did == PLAYER1_PID) {
post_short(PLAYER2_PID, PLAYER1_PID,
MSG_SHORT_BALL, s->next_seq, 0, 0);
}
return SOS_OK;
}
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Messaging Example: Ping_pong
case MSG_SHORT_BALL:
{
MsgParam *p = (MsgParam*)(msg->data);
s->next_seq = p->byte + 1;
DEBUG("%d get short ball %d\n", msg->did, p>byte);
if(p->byte % 2) {
post_short(msg->sid, msg->did,
MSG_SHORT_BALL, s->next_seq, 0, 0);
} else {
post_net(msg->sid, msg->did,
MSG_LONG_BALL, sizeof(ball_t),
&(s->next_seq), 0, ker_id());
}
return SOS_OK;
}
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Messaging Example: Ping_pong
case MSG_LONG_BALL:
{
ball_t *b = (ball_t*)(msg->data);
s->next_seq = (*b) + 1;
DEBUG("%d get long ball %d\n", msg->did, *b);
if((*b) % 2) {
post_long(msg->sid, msg->did,
MSG_LONG_BALL, sizeof(ball_t),
&(s->next_seq), 0);
} else {
Message m;
m.did = msg->sid; m.sid = msg->did;
m.daddr = ker_id(); m.saddr = ker_id();
m.type = MSG_SHORT_BALL;m.len = sizeof(ball_t);
m.data = &(s->next_seq); m.flag = 0;
post(&m);
}
return SOS_OK;
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}
36
Messaging Example: Ping_pong
default:
return -EINVAL;
}
}
void sos_start(void){
ker_register_task(DFLT_APP_ID0,
sizeof(player_t), player);
ker_register_task(DFLT_APP_ID1,
sizeof(player_t), player);
}
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Synchronous Communication
Module A
Module B
3
2
1
Module Function
Pointer Table
 Module can register function
for low latency blocking call
(1).
 Modules which need such
function can subscribe it by
getting function pointer pointer
(i.e. **func) (2).
 When service is needed,
module dereferences the
function pointer pointer (3).
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Synchronous Communcation API
typedef int8_t (*fn_ptr_t)(void);
// register function
int8_t ker_register_fn(
sos_pid_t pid,
// function
uint8_t fid,
// function
char *prototype,
// function
fn_ptr_t func);
// function
// subscribe function
fn_ptr_t* ker_get_handle(
sos_pid_t req_pid, // function
uint8_t req_fid,
// function
char* prototype)
// function
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owner
id
prototype
owner
id
prototype
39
Memory Management
 Modules need memory to store state information
 Problems with static memory allocation
 Worst case memory allocation – every variable is global
 Single packet in the radio stack – can lead to race conditions
 Problems with general purpose memory allocation
 Non-deterministic execution delay
 Suffers from external fragmentation
 Use fixed-partition dynamic memory allocation
 Memory allocated in blocks of fixed sizes
 Constant allocation time
 Low overhead
 Memory management features
 Guard bytes for run-time memory over-flow checks
 Semi-auto ownership tracking of memory blocks
 Automatic free-up upon completion of usage
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SOS Memory API
// allocate memory to id
void *ker_malloc(uint16_t size, sos_pid_t id);
// de-allocate memory
void ker_free(void* ptr);
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Messaging and Dynamic Memory
 Messaging is asynchronous operation. Attaching dynamic
memory in post() results transfer of ownership.
 Bit Flag is used to tell SOS kernel the existence of
dynamic memory.
 SOS_MSG_DYM_ALLOC -- data is dynamically
allocated
 SOS_MSG_FREE_ON_FAIL -- free memory when post
fail.
 SOS_DYM_MANAGED =
SOS_MSG_DYM_ALLOC |
SOS_MSG_FREE_ON_FAIL
 Dynamically allocated message payload will be
automatically freed after module handling.
 This is the default. You can change it by return
SOS_TAKEN instead of SOS_OK to take the memory.
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Asynchronous Module Kernel
Interaction
System Call
System
Jump Table
Module A
SOS Kernel
System Messages
High Priority
Message
Buffer
Interrupt
HW Specific API
Hardware
 Kernel provides system services and access to hardware
 Kernel jump table re-directs system calls from modules to kernel
handlers
 Hardware interrupts and messages from the kernel to modules are
dispatched through a high priority message buffer
 Low latency
 Concurrency safe operation
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Schedule Message with Software
Timer
Timer syscall
System
Jump Table
Module A
Timer Messages
SOS Kernel
High Priority
Message
Buffer
Interrupt
Timer API
Delta Timer
 Two priority: high and low.
 Normal timer has high priority while slow timer is not.
 Two types: periodic and one shot
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SOS Timer API
enum {
TIMER_REPEAT
TIMER_ONE_SHOT
SLOW_TIMER_REPEAT
SLOW_TIMER_ONE_SHOT
};
=
=
=
=
int8_t ker_timer_start(
sos_pid_t pid,
uint8_t tid,
uint8_t type,
int32_t interval
);
int8_t ker_timer_stop(
sos_pid_t pid,
uint8_t tid
);
0,
1,
2,
3,
//
//
//
//
high priority, periodic
high priority, one shot
low priority, periodic
low priority, one shot
//
//
//
//
module id
timer id
timer type
binary interval
// module id
// timer id
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Timer Example: Blink
#include <sos.h>
#define MY_ID DFLT_APP_ID0
int8_t blink(void *state, Message *msg)
{
switch (msg->type) {
case MSG_INIT:
//!< initial message from SOS
//! 256 ticks is 250 milliseconds
ker_timer_start(MY_ID, 0, TIMER_REPEAT, 256);
return SOS_OK;
case MSG_TIMER_TIMEOUT: //!< timeout message arrived
ker_led(LED_RED_TOGGLE);
return SOS_OK;
default: return -EINVAL;
}
}
void sos_start()
{
ker_register(MY_ID, 0, blink);
}
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Sensor Manager
Module A
Periodic
Access
Module B
Polled
Access
Data
Sensor
Manager
Request
 Enables sharing of sensor data between
multiple modules
 Presents a uniform data access API to
many diverse sensors
 Underlying device specific drivers register
with the sensor manager
Data
 Device specific sensor drivers control
Data Policy
 Calibration
 Data interpolation
 Sensor drivers are loadable
Sensor 1
Sensor 2
 Enables post-deployment configuration
of sensors
 Enables hot-swapping of sensors on a
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running node
47
Network Simulation Support
 Source code Level Network Simulation
 Pthread is used to simulate hardware.
 UDP is used to simulate communication with perfect
radio channel.
 Support user defined topology and heterogeneous
software configuration.
 Useful for verifying the correctness of the
implementation of the application.
 Avrora: Instruction Level Simulation




Instruction cycle accurate simulation.
Simple perfect radio channel.
Useful for verifying timing information.
See http://compilers.cs.ucla.edu/avrora/
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Discussion
 For more information look at
 SOS Project Website
 SOS tutorial & Sample code
 XYZ Manual for details on using dynamic
modules
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