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Chapter 6 Microbial Growth © 2013 Pearson Education, Inc. Copyright © 2013 Pearson Education, Inc. Lectures prepared by Christine L. Case Lectures prepared by Christine L. Case © 2013 Pearson Education, Inc. Microbial Growth Increase in number of cells, not cell size Populations Colonies © 2013 Pearson Education, Inc. The Requirements for Growth Physical requirements Temperature pH Osmotic pressure Chemical requirements Carbon Nitrogen, sulfur, and phosphorous Trace elements Oxygen Organic growth factor © 2013 Pearson Education, Inc. Physical Requirements Temperature Minimum growth temperature Optimum growth temperature Maximum growth temperature © 2013 Pearson Education, Inc. Figure 6.1 Typical growth rates of different types of microorganisms in response to temperature. Thermophiles Hyperthermophiles Mesophiles Psychrotrophs Psychrophiles © 2013 Pearson Education, Inc. Applications of Microbiology 6.1 A white microbial biofilm is visible on this deep-sea hydrothermal vent. Water is being emitted through the ocean floor at temperatures above 100°C. © 2013 Pearson Education, Inc. Psychrotrophs Grow between 0°C and 20–30°C Cause food spoilage © 2013 Pearson Education, Inc. Figure 6.2 Food preservation temperatures. Temperatures in this range destroy most microbes, although lower temperatures take more time. Very slow bacterial growth. Danger zone Rapid growth of bacteria; some may produce toxins. Many bacteria survive; some may grow. Refrigerator temperatures; may allow slow growth of spoilage bacteria, very few pathogens. No significant growth below freezing. © 2013 Pearson Education, Inc. Figure 6.3 The effect of the amount of food on its cooling rate in a refrigerator and its chance of spoilage. 15 cm (6′′) deep 5 cm (2′′) deep Refrigerator air © 2013 Pearson Education, Inc. Approximate temperature range at which Bacillus cereus multiplies in rice pH Most bacteria grow between pH 6.5 and 7.5 Molds and yeasts grow between pH 5 and 6 Acidophiles grow in acidic environments © 2013 Pearson Education, Inc. Osmotic Pressure Hypertonic environments, or an increase in salt or sugar, cause plasmolysis Extreme or obligate halophiles require high osmotic pressure Facultative halophiles tolerate high osmotic pressure © 2013 Pearson Education, Inc. Figure 6.4 Plasmolysis. Plasma membrane Cell wall Plasma membrane H2O Cytoplasm NaCl 0.85% Cell in isotonic solution. © 2013 Pearson Education, Inc. Cytoplasm NaCl 10% Plasmolyzed cell in hypertonic solution. Chemical Requirements Carbon Structural organic molecules, energy source Chemoheterotrophs use organic carbon sources Autotrophs use CO2 © 2013 Pearson Education, Inc. Chemical Requirements Nitrogen In amino acids and proteins Most bacteria decompose proteins Some bacteria use NH4+ or NO3– A few bacteria use N2 in nitrogen fixation © 2013 Pearson Education, Inc. Chemical Requirements Sulfur In amino acids, thiamine, and biotin Most bacteria decompose proteins Some bacteria use SO42– or H2S Phosphorus In DNA, RNA, ATP, and membranes PO43– is a source of phosphorus © 2013 Pearson Education, Inc. Chemical Requirements Trace elements Inorganic elements required in small amounts Usually as enzyme cofactors © 2013 Pearson Education, Inc. Table 6.1 The Effect of Oxygen on the Growth of Various Types of Bacteria © 2013 Pearson Education, Inc. Toxic Oxygen Singlet oxygen: 1O2− boosted to a higher-energy state Superoxide free radicals: O2 O2 + O2 + 2 H+ Superoxide dismutase H 2 O2 + O 2 Peroxide anion: O22– 2 H 2 O2 H 2 O2 + 2 H + Catalase Peroxidase Hydroxyl radical (OH•) © 2013 Pearson Education, Inc. 2 H 2 O + O2 2 H2O Organic Growth Factors Organic compounds obtained from the environment Vitamins, amino acids, purines, and pyrimidines © 2013 Pearson Education, Inc. Biofilms Microbial communities Form slime or hydrogels Bacteria attracted by chemicals via quorum sensing © 2013 Pearson Education, Inc. Figure 6.5 Biofilms. Clumps of bacteria adhering to surface Surface © 2013 Pearson Education, Inc. Water currents Migrating clump of bacteria Biofilms Share nutrients Sheltered from harmful factors © 2013 Pearson Education, Inc. Applications of Microbiology 3.2 Pseudomonas aeruginosa biofilm. © 2013 Pearson Education, Inc. Biofilms Patients with indwelling catheters received contaminated heparin Bacterial numbers in contaminated heparin were too low to cause infection 84–421 days after exposure, patients developed infections © 2013 Pearson Education, Inc. Culture Media Culture medium: nutrients prepared for microbial growth Sterile: no living microbes Inoculum: introduction of microbes into medium Culture: microbes growing in/on culture medium © 2013 Pearson Education, Inc. Agar Complex polysaccharide Used as solidifying agent for culture media in Petri plates, slants, and deeps Generally not metabolized by microbes Liquefies at 100°C Solidifies at ~40°C © 2013 Pearson Education, Inc. Culture Media Chemically defined media: exact chemical composition is known Complex media: extracts and digests of yeasts, meat, or plants Nutrient broth Nutrient agar © 2013 Pearson Education, Inc. Table 6.2 A Chemically Defined Medium for Growing a Typical Chemoheterotroph, Such as Escherichia coli © 2013 Pearson Education, Inc. Table 6.3 Defined Culture Medium for Leuconostoc mesenteroides © 2013 Pearson Education, Inc. Table 6.4 Composition of Nutrient Agar, a Complex Medium for the Growth of Heterotrophic Bacteria © 2013 Pearson Education, Inc. Anaerobic Culture Methods Reducing media Contain chemicals (thioglycolate or oxyrase) that combine O2 Heated to drive off O2 © 2013 Pearson Education, Inc. Figure 6.6 A jar for cultivating anaerobic bacteria on Petri plates. Lid with O-ring gasket Clamp with clamp screw Envelope containing sodium bicarbonate and sodium borohydride Anaerobic indicator (methylene blue) Petri plates © 2013 Pearson Education, Inc. Palladium catalyst pellets Figure 6.7 An anaerobic chamber. Air lock Arm ports © 2013 Pearson Education, Inc. Capnophiles Microbes that require high CO2 conditions CO2 packet Candle jar © 2013 Pearson Education, Inc. Biosafety Levels BSL-1: no special precautions BSL-2: lab coat, gloves, eye protection BSL-3: biosafety cabinets to prevent airborne transmission BSL-4: sealed, negative pressure Exhaust air is filtered twice © 2013 Pearson Education, Inc. Figure 6.8 Technicians in a biosafety level 4 (BSL-4) laboratory. © 2013 Pearson Education, Inc. Differential Media Make it easy to distinguish colonies of different microbes © 2013 Pearson Education, Inc. Figure 6.9 Blood agar, a differential medium containing red blood cells. Bacterial colonies Hemolysis © 2013 Pearson Education, Inc. Selective Media Suppress unwanted microbes and encourage desired microbes © 2013 Pearson Education, Inc. Figure 6.10 Differential medium. Uninoculated Staphylococcus epidermis © 2013 Pearson Education, Inc. Staphylococcus aureus Enrichment Culture Encourages growth of desired microbe Assume a soil sample contains a few phenol-degrading bacteria and thousands of other bacteria Inoculate phenol-containing culture medium with the soil, and incubate Transfer 1 ml to another flask of the phenol medium, and incubate Transfer 1 ml to another flask of the phenol medium, and incubate Only phenol-metabolizing bacteria will be growing © 2013 Pearson Education, Inc. Obtaining Pure Cultures A pure culture contains only one species or strain A colony is a population of cells arising from a single cell or spore or from a group of attached cells A colony is often called a colony-forming unit (CFU) The streak plate method is used to isolate pure cultures © 2013 Pearson Education, Inc. Figure 6.11 The streak plate method for isolating pure bacterial cultures. 1 2 3 Colonies © 2013 Pearson Education, Inc. Preserving Bacterial Cultures Deep-freezing: –50° to –95°C Lyophilization (freeze-drying): frozen (–54° to –72°C) and dehydrated in a vacuum © 2013 Pearson Education, Inc. Reproduction in Prokaryotes Binary fission Budding Conidiospores (actinomycetes) Fragmentation of filaments ANIMATION Bacterial Growth: Overview © 2013 Pearson Education, Inc. Figure 6.12a Binary fission in bacteria. Cell elongates and DNA is replicated. Cell wall and plasma membrane begin to constrict. Cell wall Plasma membrane DNA (nucleoid) Cross-wall forms, completely separating the two DNA copies. Cells separate. © 2013 Pearson Education, Inc. (a) A diagram of the sequence of cell division Figure 6.12b Binary fission in bacteria. Partially formed cross-wall DNA (nucleoid) (b) A thin section of a cell of Bacillus licheniformis starting to divide © 2013 Pearson Education, Inc. Cell wall Figure 6.13a Cell division. © 2013 Pearson Education, Inc. Figure 6.13b Cell division. © 2013 Pearson Education, Inc. Generation Time If 100 cells growing for 5 hours produced 1,720,320 cells: Number of generations = Generation time = Log number of cells (end) − Log number of cells (beginning) 0.301 60 min × hours Number of generations ANIMATION Binary Fission © 2013 Pearson Education, Inc. = 21 minutes/generation Figure 6.14 A growth curve for an exponentially increasing population, plotted logarithmically (dashed line) and arithmetically (solid line). Log10 = 4.52 Log10 = 3.01 Log10 = 1.51 (262,144) (131,072) (32) © 2013 Pearson Education, Inc. (524,288) (65,536) (32,768) (1024) Generations Number of cells Log10 of number of cells (1,048,576) Log10 = 6.02 Figure 6.15 Understanding the Bacterial Growth Curve. Lag Phase Log Phase Stationary Phase Death Phase Intense activity preparing for population growth, but no increase in population. Logarithmic, or exponential, increase in population. Period of equilibrium; microbial deaths balance production of new cells. Population Is decreasing at a logarithmic rate. The logarithmic growth in the log phase is due to reproduction by binary fission (bacteria) or mitosis (yeast). Staphylococcus spp. © 2013 Pearson Education, Inc. Figure 6.16 Serial dilutions and plate counts. 1 ml 1 ml Original inoculum 1 ml 1 ml 1 ml 9 m broth in each tube Dilutions 1:10 1 ml 1:100 1 ml 1:1000 1:10,000 1 ml 1 ml 1:100,000 1 ml Plating 1:10 (10-1) 1:100 (10-2) 1:1000 (10-3) 1:10,000 (10-4) 1:100,000 (10-5) Calculation: Number of colonies on plate × reciprocal of dilution of sample = number of bacteria/ml (For example, if 54 colonies are on a plate of 1:1000 dilution, then the count is 54 × 1000 = 54,000 bacteria/ml in sample.) © 2013 Pearson Education, Inc. Plate Counts After incubation, count colonies on plates that have 25–250 colonies (CFUs) © 2013 Pearson Education, Inc. Figure 6.17 Methods of preparing plates for plate counts. The pour plate method The spread plate method Inoculate 1.0 or 0.1 ml empty plate. 0.1 ml Inoculate plate containing solid medium. Bacterial dilution Add melted nutrient agar. Spread inoculum over surface evenly. Swirl to mix. Colonies grow on and in solidified medium. © 2013 Pearson Education, Inc. Colonies grow only on surface of medium. Figure 6.18 Counting bacteria by filtration. © 2013 Pearson Education, Inc. Most Probable Number Multiple tube MPN test Count positive tubes © 2013 Pearson Education, Inc. Figure 6.19a The most probable number (MPN) method. Volume of Inoculum for Each Set of Five Tubes (a) Most probable number (MPN) dilution series. © 2013 Pearson Education, Inc. Most Probable Number Compare with a statistical table © 2013 Pearson Education, Inc. Figure 6.19b The most probable number (MPN) method. (b) MPN table. © 2013 Pearson Education, Inc. Figure 6.20 Direct microscopic count of bacteria with a Petroff-Hausser cell counter. Grid with 25 large squares Cover glass Slide Bacterial suspension is added here and fills the shallow volume over the squares by capillary action. Bacterial suspension Microscopic count: All cells in several large squares are counted, and the numbers are averaged. The large square shown here has 14 bacterial cells. Cover glass Slide Location of squares Cross section of a cell counter. The depth under the cover glass and the area of the squares are known, so the volume of the bacterial suspension over the squares can be calculated (depth × area). © 2013 Pearson Education, Inc. The volume of fluid over the large square is 1/1,250,000 of a milliliter. If it contains 14 cells, as shown here, then there are 14 × 1,250,000 = 17,500,000 cells in a milliliter. Direct Microscopic Count Number of cells counted Number of bacteria/ml = Volume of area counted 14 = 17,500,000 −7 8 × 10 © 2013 Pearson Education, Inc. Figure 6.21 Turbidity estimation of bacterial numbers. Light source Spectrophotometer Light Scattered light that does not reach detector Blank Bacterial suspension © 2013 Pearson Education, Inc. Light-sensitive detector Measuring Microbial Growth Direct Methods Plate counts Filtration MPN Direct microscopic count © 2013 Pearson Education, Inc. Indirect Methods Turbidity Metabolic activity Dry weight