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Final Review Characteristics of Life!!!!!! Cells, reproduction, adaptations, DNA, responds to a stimulus, maintains, homeostasis, growth and development, and energy Bacteria ReproductionVideo Cells • Basic building block of life! ALL LIVING THINGS ARE MADE OF CELLS or ORGANIZED CELLS UNICELLULAR(single) Unicellular organisms makeup most of all organisms on Earths. MULITCELLULAR Many cells They have everything they need to be self-sufficient. Eukaryotic vs. Prokaryotic • Eukaryotic – Contains a nuclear membrane around their DNA. All kingdoms except archaebacteria and eubacteria!!!! • Prokaryotic – No nuclear membrane – all bacteria Prokaryotic Cell Eukaryotic Cell Unicellular – one celled Multi-cellular In multi-cellular organisms, the cells specialize to perform specific functions(bone cells, skin cells, muscle cells, root cells, leaf cells). Smooth muscle Nerve cell Leaf cell Yeast cell Red Blood Cell ALL LIVING THINGS MAKE AND USE ENERGY The SUN is the main source of energy!!! The Sun makes light that is used by plants!!!!!! What is the name of this process? Plants(producers) trap the energy of the Sun and make glucose(sugar) in the process called photosynthesis). Consumers(animals) get their energy from the plants!!!! Autotrophs(producers) – use the Sun’s energy to make glucose!! Produce their own food! Photosynthesis – process where plants convert Sun’s energy and carbon dioxide into glucose Heterotrophs(consumers) – must consumer food for energy! Homeostasis • Process where organisms maintain a stable internal balance. Homeostasis • Your body maintains a constant internal and external physical and chemical conditions. Everything is happy!! Goldilocks – Just Right!!! Homeostasis Dogs pant, you run a fever, sweat, or shiver, cell membranes control amount of water and waste in and out of cell, ETC ALL LIVING THINGS RESPOND TO A STIMULI Living things respond to immediate and long-term changes in their environment(shiver when cold, change fur color, bend toward light). Stimulus – something in organism’s environment that causes a response ALL LIVING THINGS REPRODUCE Reproduction must occur for a species to survive. Reproduction can be either sexual or asexual. Asexual Reproduction – NO joining of sperm and egg!!!! Sexual reproduction – combination of sperm and egg ALL LIVING THINGS GROW AND DEVELOP To grow means to get bigger and to get bigger; more cells must be added. To increase numbers of cells, cell division must occur. Develop means to change into an adult(mature). • Living creatures GROW & DEVELOP Change over an individual’s life time – get bigger – mature • so they can reproduce Growth – Organism get larger by adding cells and cellular material Development - mature ALL LIVING THINGS CHANGE TO FIT THEIR ENVIRONMENT(ADAPT) Organisms must adapt to their changing environment or become extinct. Adaptations occur over a very long period of time(millions of years). Adaptation – Inherited trait that is passed from parent to offspring that helps an organism survive in its environment ALL LIVING THINGS HAVE DNA. DNA provides instructions for making molecules called proteins. Proteins build cells. DNA carries the genetic material from parent to offspring(heredity). DNA – molecule that stores genetic information LET”S PRACTICE!!! Which characteristics of life is being described? Reproduction Cells Adaptation Grow and develop Responses Energy ENZYMES A protein that acts as a catalyst which lowers activation energy needed to start a reaction. * *They speed up reactions by weakening bonds. *Always in in -ase © 2007 Paul Billiet ODWS How do enzymes Work? Enzymes work by weakening bonds which lowers activation energy. Easier to start reaction!!! 34 Enzymes • Are specific for what they will catalyze • Are Reusable • End in –ase -Sucrase -Lactase -Maltase 35 Enzymes have five important properties: 1.They are always proteins. 2. They are specific in their action. Each enzyme controls one particular reaction, or type of reaction. Thus sucrase degrades sucrose and only sucrose (table sugar). ONE SUBSTRATE!!! 3. They are not altered by the reaction. This means that an enzyme can be used repeatedly. It also means that enzymes appear neither in the reactants nor in the products of a chemical equation. 4. They are destroyed by heat. This is because enzymes are proteins, and all proteins are destroyed by heat. Destruction of protein by heat (or under any extreme conditions of pH or salt concentration) is called denaturation. 5. They are sensitive to pH. The substrate • The substrate of an enzyme are the reactants that are acted on by the enzyme. • Enzymes are specific to their substrates • The specificity is determined by the active site • ENZYMES ARE SHAPED TO FIT ONLY THEIR SUBTRATE BECAUSE THEIR ACTIVE SITE IS SHAPED TO FIT ONLY ONE SUBSTRATE!!!! © 2007 Paul Billiet ODWS The active site PLACE WHERE SUBSTRATE FITS!! ONLY THE ONE SUBTRATE WILL FIT!!! © H.PELLETIER, M.R.SAWAYA ProNuC Database © 2007 Paul Billiet ODWS Active Site • A restricted region of an enzyme molecule which Active binds to the substrate. Site Substrate Enzyme 39 Enzyme-Substrate Complex This is the product of the substrate and the enzyme together. Substrate Joins Enzyme 40 The Lock and Key Hypothesis • Fit between the substrate and the active site of the enzyme is exact • Like a key fits into a lock very precisely • The key is analogous to the enzyme and the substrate analogous to the lock. • Temporary structure called the enzymesubstrate complex formed © 2007 Paul Billiet ODWS Enzyme Structure It fits like a lock and key with its substrate. Will not fit any other substance. How Enzymes Work: 1. Enzyme brings molecules close together. 2. By bonding they have weaken the bonds of the substrate so they reaction can occur quicker. Induced Fit • A change in the shape of an enzyme’s active site • Induced by the substrate 43 What Affects Enzyme Activity? • Three factors: 1.Temperature 2. pH 3.Inhibitors 44 Denaturing Enzymes • Denaturing =- factors that change the shape. • Without the correct shape enzymes won’t function properly. • HOW are enzymes denatured? – Temperature *pH Life Sciences-HHMI Outreach. Copyright 2009 President and Fellows of Harvard College (–) (–) O H (+) H (+) What Make Water Unique? • Polarity and hydrogen bonds!! Polarity of Water In a water molecule two hydrogen atoms form single polar covalent bonds with an oxygen atom. – Oxygen is larger so the electrons stay around the oxygen and not the hydrogen. – This makes water charged. – Oxygen area negative. – The region near the two hydrogen atoms has a partial positive charge. A water molecule is a polar molecule with opposite ends of the molecule with opposite charges. Water Molecule • Water has a variety of unusual properties because of attractions between these polar molecules. – The slightly negative regions of one molecule are attracted to the slightly positive regions of nearby molecules, forming a hydrogen bond. – Each water molecule can form hydrogen bonds with up to four neighbors. Fig. 3.1 Copyright © 2002 Pearson Education, Inc., publishing as Benjamin Cummings Hydrogen bond Hydrogen Bonds Between DNA!! WATER’S LIFE-SUPPORTING PROPERTIES Copyright © 2009 Pearson Education, Inc. Water’s Properties 1. Cohesion & Adhesion 2. High Specific Heat 3. High Heat of Vaporization 4. Solid water (ice) is less dense than liquid 5. Solvent 6. Transparent 1. Cohesion • Water clings to polar molecules through hydrogen bonding – Cohesion refers to attraction to other water molecules. • responsible for surface tension – Surface tension - a measure of the force necessary to stretch or break the surface of a liquid – Some animals can stand, walk, or run on water without breaking the surface. Adhesion • Adhesion: attraction between particles that are different. Examples: Blood to vessels, water to xylem in plant. Clinging of one substance to another. Organisms Depend on Cohesion • Adhesion is responsible for the transport of the water through the xylem in plants against gravity. • Capillary Action – combination of adhesion and cohesion that moves water up the xylem. • Water molecules stick to walls of vessels and water sticks to each other. • Caused by Hydrogen bonds Capillary action water evaporates from leaves = transpiration adhesion, cohesion and capillary action water taken up by roots Specific Heat Specific Heat is the amount of energy required to change the temperature of a substance. Water has a high specific heat – it absorbs a lot of energy before it begins to heat up! Takes a lot of heat to break apart the bonds. HOW WOULD THIS HELP ORGANISMS!! 3. High Heat of Vaporization **Because it also involves the breaking of hydrogen bonds, water resists vaporizing (evaporating). Consequently, it takes a lot of heat to evaporate water. This high heat of vaporization is also utilized by organisms as a cooling process, e.g., sweat or panting. 3. EVAPORATIVE COOLING • As a liquid evaporates, the surface of the liquid that remains behind cools Evaporative cooling. • Evaporative cooling moderates temperature in lakes and ponds and prevents terrestrial organisms from overheating. • Evaporation of water from the leaves of plants or the skin of animals removes excess heat. 4. Ice Floats • When water freezes, hydrogen bonds lock water molecules into a crystalline pattern with empty spaces. This makes ice less dense than water. So ice floats. • Organisms can live below the ice!!!! Solid water (ice) is less dense than liquid • Ice is less dense than water: the molecules are spread out to their maximum distance Density = mass/volume same mass but a larger volume 5. Water is Transparent • The fact that water is clear allows light to pass through it. NOT BECAUSE OF H BONDS!! – Aquatic plants can receive sunlight – Light can pass through the eyeball to receptor cells in the back 6. Water Solubility • Water Universal Solvent – Dissolves other polar molecules!!! • Solubility: the ability to be dissolved. What would cause this? • Charged ends of molecules attract each other making them dissolve. 6. Solvent for Life Hydrophilic – Ionic compounds dissolve in water – Polar molecules (generally) are water soluble • Hydrophobic – Nonpolar compounds Autosomal vs. Sex Chromosomes INCOMPLETE DOMINANCE Sometimes, you may notice that traits can blend Together. The blending of two traits is call incomplete dominance. Two capital letters are used. Examples – palomino in horses, pink color in flowers are red and white combined. What is meant by MULTIPLE ALLELES? • A trait that is controlled by more than two alleles is said to be controlled by multiple alleles • Traits controlled by multiple alleles produce more than three phenotypes of that trait. • Codominance – 2 alleles of a gene are completely expressed and both phenotypes are completely expressed! • BOTH COLORS OR PHENOTYPES ARE EXPRESSED!!! • Black and white cow! Codominance • Both alleles are expressed 1. type A= IAIA or IAi 2. type B= IBIB or IBi 3. type AB= IAIB 4. type O= ii Where are Disorders Located? • Autosomal chromosomes: 1 - 22 – The disorder is caused by a gene or nondisjunction of chromosomes 1 - 22. * Sex Linked disorders: Located on the X or Y chromosomes. Sex Linked Genes Sex Linked Traits or Disorders - The X and Y chromosomes carry the genes that determine gender traits so the genes located on X and Y are called sex linked. • X – 1098 genes • Y – 26 genes much smaller!!! Sex Linked Genes • The genes that are on the X are expressed in the phenotype of the male because it is the only gene they carry. If the gene is a recessive for a disorder, the male will have the disorder. • Ex: hemophilia, duchene muscular, fragile-X syndrome, high blood pressure(some), night blindness, and red-green color blindnesss. Sex-Linked Inheritance • Traits that are only found on the X chromosome • Colorblindness and Hemophilia are examples of sex-linked traits. • These genes are recessive and found only on the X chromosome. How Would a Female Have a Sex Linked Disorder? • She would have to receive a recessive gene from both parents. Goals of Pedigree Analysis 1. Determine the mode of inheritance: dominant or recessive, autosomal or sexlinked, . 2. Determine the probability of an affected offspring for a given cross. Today... Pedigree analysis 4 Types of Basic patterns or modes of inheritance autosomal, recessive autosomal, dominant X-linked, recessive X-linked, dominant (very rare) Sample pedigree - cystic fibrosis male female affected individuals Dominant Autosomal Pedigree I 2 1 II 1 2 3 4 5 6 III 1 2 3 4 5 6 7 8 9 10 Autosomal Recessive • All affected are homozygotes. • Unaffected outsiders are assumed to be homozygous normal Autosomal recessive traits • Trait is rare in pedigree • Trait often skips generations (hidden in heterozygous carriers) • Trait affects males and females equally Recessive Autosomal Pedigree Autosomal recessive diseases in humans Most common ones •Cystic fibrosis •Sickle cell anemia •Phenylketonuria (PKU) •Tay-Sachs disease Sex-Linked Recessive • males get their X from their mother • fathers pass their X to daughters only • females express it only if they get a copy from both parents. • expressed in males if present • recessive in females • outsiders are assumed to be homozygous. X-linked recessive pedigrees • Trait is rare in pedigree • Trait skips generations • Affected fathers DO NOT pass to their sons, • Males are more often affected than females X-linked recessive traits ex. Hemophilia in European royalty • • • • Three types of RNA: 1. mRNA • 2. tRNA “messenger” RNA • “transfer” RNA Carries code for • Attaches specific proteins from DNA Amino Acids to the Carries “codon” protein chain by matching the mRNA codon with the anticodon. RNA TRANSCIPTION There are three (3) types RNA: 1. Ribsome RNA – (rRNA) makes up the ribsome. Site of protein synthesis Structure of the Cell Membrane Outside of cell Proteins Lipid Bilayer Transport Protein Animations of membrane Go to structure Section: Carbohydrate chains Phospholipids Inside of cell (cytoplasm) How does stuff get in and out of the cell? • The cell membrane is what allows stuff in and out of the cell. The membrane is selectively permeable. • Selectively permeable• Definition- means that some substances can cross the membrane while others cannot. Polar heads love water & dissolve. Non-polar tails hide from water. Carbohydrate cell markers Proteins Fluid Mosaic Model This model describes the structure of the cell membrane!! How do phosolipids control what can pass through Membrane? The hydrophobic tails will not let any substance pass through that has a charge(ion)(hydrophilic). Only substances that are not charged (hydrophobic)can pass through. If they cannot pass through the membrane, then they must go through the must get in another way. Cell Transport • • • • • • To understand cell transport, you must understand how molecules move. All molecules move. Even solids vibrate. Most of the cell environment is liquid. Molecules want to reach EQUILIBRIUM! Equilibrium – equal amount of molecules everywhere(across cell membrane). Types of Active Transport • Active – requires energy against the gradient • Passive – no energy required. Uses the concentration gradient! Diffusion • Movement of molecules moving from an area of higher concentration to an area of lower concentration. • Example: air freshener, perfume, food cooking, food coloring in water. • Increase temperature; increase rate of diffusion • Diffusion occurs in liquids and gases. Which direction will molecules flow? Concentration Gradient • Difference in concentration of molecules that makes the molecules move. They move from highest level to the lowest level. • The greater the difference the faster the molecules move. Diffusion video • http://video.search.yahoo.com/search/vide o;_ylt=A0SO8ZpVTNdMKS8AS3H7w8QF; _ylu=X3oDMTBncGdyMzQ0BHNlYwNzZ WFyY2gEdnRpZAM-?p=diffusion&ei=utf8&fr2=tab-img&n=21&tnr=21&y=Search How does stuff get in and out of the cell? • Substances that move into and out of a cell do so by means of one of two processes: PASSIVE TRANSPORT or ACTIVE TRANSPORT. Types of Cell Transport • No Energy • Passive Transport Energy Active Transport – Diffusion Faciliated diffusion(osmosis) Bulk transport endocyotsis exocytosis Passive Transport • http://video.search.yahoo.com/search/vide o;_ylt=A0PDoX1LTNdMKyoAZayJzbkF?ei =UTF-8&p=passive%20transport&fr2=tabimg&fr=The Cell and Its Environment 2010.ppt Passive Transport • Definition: is the movement of dissolved materials across a cell membrane without using the cells energy. • Energy required: NO • Type of Transport: PASSIVE • Diffusion or facilitated diffusion(osmosis) Passive Transport Diffusion – passive transport • Definition: is the process by which molecules move from an area of higher concentration to an area of lower concentration(liquids or gases). • Ex: If a bacteria lives in a pond, the water in the pond contains oxygen molecules. The area inside the bacteria cell has a lower amount of oxygen than the pond. So, the oxygen molecules outside of the cell will freely move into the cell. Faciliated Diffusion- Type of Passive Transport • Movement of molecules across the cell membrane but using a carrier molecule(protein) • NO ENERGY • Follows the same rules as diffusion but these molecules cannot slip through the phosolipid tails. Osmosis – facilitated diffusion • Definition: is the diffusion of water molecules across a selectively permeable membrane(sometimes uses carrier protein). • -Many life processes require water, therefore; all cells must have the appropriate amount of water in them to function. • Energy Required: NO • Type of Transfer: PASSIVE Osmosis – Type of Faciliated Diffusion • Movement of WATER across the cell membrane. • Cells are 75 – 90 % water so osmosis is • an important process. • Water molecules will continue to move until EQUILIBRUIM is reached. • NO ENERGY NEEDED!! Types of solutions cell can be placed • Isotonic • Hypertonic • Hypotonic Isotonic • Concentration of solutes are EQUAL inside and outside the cell. • Why do they give a person who is dehydrated a saline(minerals and salt) drip(IV) vs. distilled 100% water. Hypertonic • Solutes on the outside of cell is higher. Water leaves cell • This is why slugs shrivels up with salt. • Animals that leave in salt water have adaptations to deal with the salt in the water. • This is why you do not drink salt water. • How will road salt affect roadside plants? Hypertonic Solution Cells are shrinking because more solute outside so water leaves cell. Hypotonic • Concentration of solute is greater inside the cell so water moves in. • Animal cell will burst. • Plant cells fill vacuole creates RIGOR! • This is what causes plant to stand up. Hypotonic Solution