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1 of 30 © Boardworks Ltd 2009 2 of 30 © Boardworks Ltd 2009 Molecular and empirical formulae There are many ways of representing organic compounds by using different formulae. The molecular formula of a compound shows the number of each type of atom present in one molecule of the compound. The empirical formula of a compound shows the simplest ratio of the atoms present. Molecular formula C2H6 Empirical formula CH3 C6H12O6 CH2O C2H4O2 CH2O Neither the molecular nor empirical formula gives information about the structure of a molecule. 3 of 30 © Boardworks Ltd 2009 Displayed formula of organic compounds The displayed formula of a compound shows the arrangement of atoms in a molecule, as well as all the bonds. Single bonds are represented by a single line, double bonds with two lines and triple bonds by three lines. The displayed formula can show the different structures of compounds with the same molecular formulae. ethanol (C2H6O) 4 of 30 methoxymethane (C2H6O) © Boardworks Ltd 2009 Structural formula of organic compounds The structural formula of a compound shows how the atoms are arranged in a molecule and, in particular, shows which functional groups are present. Unlike displayed formulae, structural formulae do not show single bonds, although double/triple bonds may be shown. CH3CHClCH3 H2C=CH2 CH3C≡N 2-chloropropane ethene ethanenitrile 5 of 30 © Boardworks Ltd 2009 Displayed and structural formula activity 6 of 30 © Boardworks Ltd 2009 Skeletal formula of organic compounds The skeletal formula of a compound shows the bonds between carbon atoms, but not the atoms themselves. Hydrogen atoms are also omitted, but other atoms are shown. 7 of 30 © Boardworks Ltd 2009 Types of formulae 8 of 30 © Boardworks Ltd 2009 Functional groups and homologous series A functional group is an atom or group of atoms responsible for the typical chemical reactions of a molecule. A homologous series is a group of molecules with the same functional group but a different number of –CH2 groups. methanoic acid (HCOOH) ethanoic acid (CH3COOH) propanoic acid (CH3CH2COOH) Functional groups determine the pattern of reactivity of a homologous series, whereas the carbon chain length determines physical properties such as melting/boiling points. 9 of 30 © Boardworks Ltd 2009 Functional groups 10 of 30 © Boardworks Ltd 2009 Homologous series and general formulae The general formula of a homologous series can be used to calculate the molecular formula of any member of the series by substituting n for the number of carbon atoms. For example, the general formula of a halogenoalkane is CnH2n+1X, where X is a halogen. Example: what is the molecular formula of chloroethane? 1. Write down the general formula: CnH2n+1X 2. Write down the value of n: n=2 3. Substitute n into the general formula: C2H5Cl 11 of 30 © Boardworks Ltd 2009 Homologous series 12 of 30 © Boardworks Ltd 2009 13 of 30 © Boardworks Ltd 2009 What is isomerism? Isomers are molecules with the same molecular formula (i.e. the same number and type of atoms) but in which the atoms are arranged in a different way. There are two main categories of isomerism: structural isomerism and stereoisomerism. Structural isomers have different structural formulae. Three types of structural isomerism are chain isomerism, positional isomerism and functional group isomerism. Stereoisomers have the same structural formula, but the 3D arrangement of atoms is different. Two types are cis–trans isomerism and optical isomerism. 14 of 30 © Boardworks Ltd 2009 Chain isomerism in alkanes In chain isomers, the carbon chain is arranged differently. For example, hexane has several chain isomers, all with the molecular formula C6H14: hexane 2,3-dimethylbutane 3-methylpentane 15 of 30 © Boardworks Ltd 2009 Positional isomerism In positional isomers, the functional group is attached to a different carbon atom. For example, chloropentane has several positional isomers, all with the molecular formula C5H11Cl: 1-chloropentane 2-chloropentane 3-chloropentane 16 of 30 © Boardworks Ltd 2009 Positional isomerism in alkenes Positional isomerism also exists in alkenes with four or more carbon atoms. hex-1-ene For example, hexene has several positional isomers, all with the molecular formula C6H12: hex-2-ene hex-3-ene 17 of 30 © Boardworks Ltd 2009 Functional group isomerism Functional group isomers contain different functional groups and so are members of different homologous series. For example, both alcohols and ethers have the general formula CnH2n+2O so they may be functional group isomers: propanol (C3H8O) an alcohol 18 of 30 methoxyethane (C3H8O) an ether © Boardworks Ltd 2009 Structural isomers activity 19 of 30 © Boardworks Ltd 2009 20 of 30 © Boardworks Ltd 2009 Rotation around the C=C bond in alkenes Molecules can rotate freely around single C-C covalent bonds, but not around C=C double bonds. This leads to type of stereoisomerism called cis–trans isomerism, in which isomers differ in the arrangement of the groups attached to the carbons in the double bonds. is not the same as These isomers cannot be superimposed on each other because the arrangement of the methyl groups is different. 21 of 30 © Boardworks Ltd 2009 Cis–trans isomerism If an alkyl group or atom other than hydrogen is attached to each carbon then the isomers can be named either cis (‘on the same side’) or trans (‘on the opposite side’). cis-but-2-ene cis-1,2-dichloroethene 22 of 30 trans-but-2-ene trans-1,2-dichloroethene © Boardworks Ltd 2009 Limitations of cis–trans isomerism In more complex organic compounds, in which multiple hydrogens have been substituted by different groups, isomers cannot be defined using the cis–trans notation. For example, is it possible to identify which of these halogenoalkanes is the cis isomer and which is the trans isomer? Instead, a different system is used for these type of molecules: E–Z notation. 23 of 30 © Boardworks Ltd 2009 E–Z isomerism The E–Z notation is used to identify stereoisomers that cannot be called cis or trans. Isomers are identified as either E or Z depending on what ‘priority’ is given to the groups attached to the carbon atoms in the double bond. The priority of these groups is determined by a complex series of rules. E represents the German word ‘entgegen’, and corresponds to trans isomers. The highest priority groups are on the opposite side of the double bond. Z represents the German word ‘zusammen’, and corresponds to cis isomers. The highest priority groups are on the same side of the double bond. 24 of 30 © Boardworks Ltd 2009 Optical isomerism Another form of stereoisomerism is optical isomerism, in which a molecule can exist as two isomers that are nonsuperimposable, mirror images of each other, just like a left hand and right hand. optical isomers of the amino acid alanine Optical isomers have the same physical properties, but they rotate polarized light in opposite directions. 25 of 30 © Boardworks Ltd 2009 Stereoisomerism: true or false? 26 of 30 © Boardworks Ltd 2009 27 of 30 © Boardworks Ltd 2009 Glossary 28 of 30 © Boardworks Ltd 2009 What’s the keyword? 29 of 30 © Boardworks Ltd 2009 Multiple-choice quiz 30 of 30 © Boardworks Ltd 2009