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Student Presenters at SciFest V, July 30, 2015 (organized by Brandeis advisor/lab) Student Presenter Poster # Title Baskaran Jianshuo Qiu (Brandeis / Mathematics, Physics) 2016.619 Emergent Structures in Dense Active Fluids Chakraborty 2016.704 Shubham Singh (Indian Institute of Science, Bangalore / Physics) Modeling fluctuation driven interaction between colloidal rafts : Casimir Effect Dogic Angela Berry (Hampton University / Pre-Pharmacy) 2016.627 The Nanometer-Scale Stepping Behaviors of Kinesin 401 and Kinesin 365 Billy Chau (Brandeis / Biological Physics) 2016.644 Exploring the Phase Transition of a filamentous virus Margaret Morris (Brandeis / Mathematics, Physics) 2016.620 Elastic Buckling of Rigid Bio-polymers Helen Yang (Brandeis / Biochemistry, Biological Physics) 2016.631 Temperature Induced Polymorphic Transitions of Flagella 2016.661 Effect of Sodium Bromide on Pattern Formation in the Chlorine Dioxide-Iodine-Malonic Acid (CDIMA) Reaction-Diffusion System Yongwoon Kim (Brandeis / Biochemistry, Chemistry) 2016.659 Coupling Behaviors of Spatially Arranged Oscillating Gels Zhiheng Wang (Brandeis / Biochemistry, Chemistry) 2016.660 Rhythmic release of an anti-depressant by an enzyme system Remi Boros (Brandeis / Physics) 2016.624 Driving Chaos Off the Grid - Analyzing Networks in Microfluidic Lattices of Chemical Oscillators Jesse Held (Brandeis / Physics) 2016.643 Behavioral State Switching in Star Graph Networks Dolnik Yunqiao Gan (Brandeis / Biochemistry, Chemistry) Epstein Fraden Alexander Mitchell (Brandeis / 2016.646 Biology, Neuroscience, Biophysics) 2016.653 Susan Okrah (Hampton University / Chemical Engineering ) 2016.626 Niya Wilkins (Hampton University / Environmental Science) Phase-Dependent Response to Excitatory Activity in the BelousovZhabotinsky Reaction Observations of Three Ringed Networks of BZ Droplets Making Double Emulsions in Thermoplastic Microfluidic Devices Student Presenter Poster # Title Fulton Jacqueline Jeon-Chapman (Brandeis / Biology) 2016.622 Epigenetic Gene Silencing Induced by Invading Homologous DNA in Naegleria gruberi Heather Schiller (Brandeis / Biology) 2016.688 Species, Variation, and Global Distribution of Naegleria 2016.632 Neural circuit control of physiological homeostasis Garrity Abigail Daniels (Brandeis / Biology) Josefine Striepen (Bryn Mawr / 2016.642 Biology) Bitter Sweet: Drosophila Interaction with Denatonium through Ionotropic Receptor 25a Goode Erin Evonne Jean (Hampton University / Cellular Molecular Biology) 2016.616 Understanding the Role of Coactosin in Actin Dynamics Julia Schiantarelli (Brandeis / Biology) 2016.706 The role of Bik1 and formin interactions in coordinating the actin cytoskeleton Griffith Katherine Dorfman (Brandeis) 2016.638 2016.701 Mark Sherer (Brandeis / Neuroscience) Let-7 is required for development, survival, and fertility in Drosophila The development of a molecular toolkit to probe in vivo CaMKIIsubunit exchange Gutchess Sarah Lipitz (Brandeis / Neuroscience, Psychology) 2016.625 Effects of Age on Recruiting the Medial Prefrontal Cortex During SelfReferential Encoding Haber Ji Eun Bae (Brandeis / Biology) 2016.671 2016.657 Stephanie Howes (Umass Lowell / Biotechnology ) Characterization of Cas9's Mutagenic Signature in S. cerevisiae Study Of Histone 3 And 4 Core Domain Post-translational Modification In Gene Conversion Hedstrom Hannah Bernstein (Brandeis / Biology, Chemistry) 2016.707 Determining Selectivity in Bacterial IMPDH Inhibitor Sensitivity Alex Cuadros (University of Massachusetts Amherst / Biochemistry) 2016.614 Elucidating an Inhibitor Binding Mode in Acinetobacter baumannii IMP Dehydrogenase Sabrina McDonnell (Brandeis / 2016.615 Biochemistry) 2016.708 Motilal Uttarkabat (Indian Institute of Science / Biology) Sarah Zainelabdin (Brandeis / 2016.686 Biology, Chemistry) 2016.658 Zhongrui Zhang (Brandeis / Biochemistry) Exploring Interactions Between IMPDH, RNA Polymerase, and Ribosome in Escherichia coli Purification of IMPDH from Mycobacterium tuberculosis Flap Deletion May Have an Influence on Penicillium brevicompactum IMP Dehydrogenase Resistance to Mycophenolic Acid mTORC1 Signal Inhibitor Cbz-Boc3-Arginine Interacts with Ubiquilin Student Presenter Poster # Title Ivanovic 2016.677 Frankie Marchan (Brandeis / undeclared, intended majors in biochemistry and neuroscience) Effect of Limited Activation of Fusion Protein on Probability of Viral Membrane Fusion Jadhav Ethan Glantz (Brandeis / Neuroscience) 2016.672 Understanding the Functional Connectivity between Hippocampus and Medial Prefrontal Cortex Through Chemogenetic Inactivation Elon Mathieson (Brandeis / Neuroscience) 2016.690 Tasty Place Cells; Multimodality in the Hippocampus 2016.606 The Neurobiology of the Impact of Innocuous Experience on Later Learning Nina Feinberg (Brandeis / Biochemistry, Biology) 2016.649 Ancient protein points to life's origin: Knock-in of ancestral adenylate kinase alters growth profile of a modern mesophile Jair Flores (University of Maryland, Baltimore County / Biochemistry) 2016.698 Understanding the Evolution of Circadian Rhythm in Cyanobacteria by ABC Protein Complexes Ayantu Temesgen (Brandeis / Biochemistry) 2016.676 A memo from Millennial Kinases to The Lost Generation: “We are not so lazy after all!” Katz Tamar Parmet (Brandeis / Psychology) Kern Sara Gelles-Watnick (Brandeis 2016.611 / Biochemistry) Activity of c-Src and Sortase-ligated models Kondev Eduardo da Veiga Beltrame (Brandeis / Biophysics) 2016.685 Implementation of a simple to use Gene Transcription Simulator Ziwei Huang (Brandeis / Physics) 2016.713 Building Logic Gate based on Thermodynamic Model Everett Weber (Brandeis / Biological Physics) 2016.711 Time Dependence of Variance in the Limiting Pool Mechanism 2016.697 Direct Evolution of glycoDNAs Antigenic for a Carbohydrate Epitope on HIV 2016.639 The Molecular Basis of Memory: Calcium-calmodulin-dependent protein kinase II (CaMKII) is necessary for the maintenance of longterm potentiation and behavioral memory 2016.655 Insights from a bacterial diet: How studying terpene metabolizing bacteria plays a part in forest blight prevention Krauss Scott MacDonald (Brandeis / Biology, Chemistry) Lisman Megan Leubner (Brandeis / Neuroscience) Lovett SoJin Chon (Brandeis / Biology) Student Presenter Poster # Kristin Diamantides (Brandeis 2016.664 / Biology) Kati Vu (Salem State University 2016.634 / Biology) Title Bacterial Genome Constructions of lacZ to Study Homologous Recombination Rates Screening for genes involved in repairing QP mutations by template switching Marder Cosmo Guerini (Brandeis / Neuroscience) 2016.637 Predominant Algorithm for Computationally Modeling Single-Neuron Morphology Shown Insufficient in the Stomatogastric Ganglion Lily He (Brandeis / Biology, Neuroscience) 2016.648 How Does a Crustacean Neuronal Circuit Respond to Changes in Extracellular [K+]? Dahlia Kushinsky (Brandeis / Neuroscience) 2016.709 In Vivo Characterization of Central Pattern Generator Controlled Rhythms of C. Borealis Matt Stenerson (Brandeis / Neuroscience) 2016.637 Predominant Algorithm for Computationally Modeling Single-Neuron Morphology Shown Insufficient in the Stomatogastric Ganglion James Weiss (Brandeis / Neuroscience) 2016.689 Interplay of Temperature and Neuromodulation on the Activity of the Crustacean Cardiac Pacemaker Alexis Corrado (Brandeis / Biology) 2016.714 Crystallographic Comparison of Electron Difference Densities in Fluc Senmiao Sun (Brandeis / Biochemistry, Neuroscience) 2016.629 Essential phenylalanine box in a unique fluoride ion channel (Fluc) Felicia Lee (Brandeis / Neuroscience, HSSP) 2016.647 Analysis of Sexually Dimorphic Neurons in Mice Bethany Rennich (Brandeis / Biochemistry, Neuroscience) 2016.652 Investigating Surf2 in the context of conditioned taste aversion Danielle Robbins (Brandeis / Neuroscience) 2016.700 Gene Silencing with Age in the Mouse CNS Robin Schectman (Brandeis / Biology) 2016.636 Homeostatic changes in gene expression and axonal morphology in response to network activity deprivation Miller, C. Nelson Oprian Aaron Ammerman (Brandeis / 2016.651 Biochemistry) 2016.684 Natalie Harris (University of Maryland Baltimore County / Biochemistry) Kamsi Odinammadu (UMBC / 2016.681 Biology) Spectral Tuning of an Opsin-Guanylyl Cyclase Fusion Protein for Optogenetic Use Role of Tryptophan Residues in a Novel Opsin Fusion Protein Engineering Caenorhobditis elegans for Phototaxis Pandelia Ben Pomerantz (Brandeis / Biology) 2016.663 Cyclic-di-Nucleotide Hydrolysis by a Diiron Phosphodiesterase from the Vibrio cholerae Pathogen Student Presenter Poster # Title Paradis Dena Goldblatt (Brandeis / Biology, Neuroscience, Psychology) 2016.628 The Role of PlexinB Receptors in Synapse Formation Keaton Unroe (Longwood University / Biology) 2016.640 Semaphorin 4D as a Possible Treatment for Epilepsy Laura Bonvini (Brandeis / Chemistry) 2016.665 Analysis of Alpha-Synuclein Oligomers in Human Brain Tissue Phillix Esquea (Brandeis / Biochemistry) 2016.710 Isolating P450 gene in wild bacterial genome Yihao Zhuang (Brandeis / Biochemistry) 2016.710 Isolating P450 gene in wild bacterial genome Carly KleinStern (Brandeis / Physics) 2016.682 JVLA Imaging of X-Shaped Radio Galaxies.I Micah Margolis (Brandeis / Physics) 2016.630 Novel Techniques for Examining the Restarting Radio Galaxy 3C 219 in Search of Star Formation Kevin Wang (Brandeis / Physics) 2016.683 JVLA Imaging of X-Shaped Radio Galaxies. II Amber Jones (Hampton University / Biology) 2016.687 Determining the Relationship Between Nervous Wreck and the Cell Membrane at Different Phosphoinositide Levels Amanda Shilton (Brandeis / Biology, Neuroscience) 2016.621 Identifying Key Players in Growth Factor Signaling Defects in Amyotrophic Lateral Sclerosis Angelina Gallego (Hampton University / BioPhysics) 2016.623 “Look at that Membrane!” Understanding the Interactions Between Colloids and Lipid Stabilized Interfaces Using DNA Kyra Hamel (Brandeis / Biochemistry, Biophysics) 2016.679 Look at Those Curves: Measuring Thermodynamic Properties of Multi-Strand DNA Pochapsky Roberts Rodal Rogers Guillermo Narvaez (Brandeis / 2016.617 Physics) 2016.699 Michael Perlow (Brandeis / Biological Physics) Zach Trotz (Brandeis / Physics) 2016.702 Olivia Zou (Brandeis / Mathematics, Biological Physics) Quantitative Study of Linker-Mediated Binding Between DNA-Coated Colloids Powering Active Colloids with DNA polymerization Tiny Tumblebeads: Making Spinning Colloids Roll with DNA-Mediated Friction 2016.693 Gaining a Toehold in the Thermodynamics of DNA Strand Displacement 2016.680 Investigation of the Native circadian CLOCK-complex in Drosophila melanogaster Rosbash Micael Maya-Peinl (UC San Diego / Biochemistry) Student Presenter Poster # Title 2016.703 Investigating the PER and TIM protein profiles in Drosophila melanogaster circadian clock mutants 2016.641 Characterizing the role of grdn-1 in regulating neuronal morphology Brian Gzemski (Brandeis / Biochemistry) 2016.650 Ligand-Specific Interactions in the Hsp90 N-Terminal Domain Radhika Jangi (Brandeis / Biochemistry) 2016.705 Examining Rare Codon Clusters in Hsp90 Nicholas G. Martinez (University of Kansas / Biochemistry) 2016.607 Generation of Catalytically Inactive Molecular Chaperone Hsp90 for Conformational Studies Avinoam Singer (Brandeis / Biochemistry) 2016.608 Elucidating the structural basis by which substrate proteins activate Hsp90 Karen Wang (Emory University 2016.691 / Biology) Title: Evaluating the pH and Salt Dependence of ATP Hydrolysis in Trap1 Michael Wang (Brandeis / Biochemistry, Biology) Sengupta Sofia Lavrentyeva (Brandeis / Neuroscience) Street Theobald 2016.605 Investigating Active Site Dynamics of Apicomplexans Malate Dehydrogenase by Nuclear Magnetic Resonance 2016.610 Come to Cobalt: Synthesis and Characterization of Novel Cobalt-SNS Complexes for H2 Fuel Catalysis Victor Suarez (Kean University 2016.656 / Biology, Chemistry) Quantitative Comparison of Nuclear and Somatic CaMKIV Expression in Pyramidal Visual Cortex Neurons Miriam Hood (Brandeis / Biochemistry) Thomas Jeremy Koob (Brandeis / Biochemistry, Chemistry) Turrigiano Van Hooser Benyamin Meschede-Krasa (Brandeis / Biology, Neuroscience) 2016.613 Spatio-temporal receptive field structure and modeling the development of cortical direction selectivity David Landesman (Brandeis / Biology, Neuroscience) 2016.692 Carbon Fiber Electrode Bundles for Dense Recordings of Neural Circuits Isabel Smith (Brandeis / Biology) 2016.675 Investigating the Role of the Small GTPase Rem2 in a PTZ Seizure Model David Barnes (Hampton University / Mathematics) 2016.694 Generation of Methylene-coupled Products via Reductive Elimination from an Oxidied Gold(III-III) A-Frame Rohin Biswas (Indian Institute of Science, Bangalore / Chemistry) 2016.666 Synthesis And Characterization of Metal-Organic Frameworks (MOFs) Containing Pd Diphosphine Pincer Complexes Anna Rothstein (Brandeis / Biology, Chemistry) 2016.667 Synthesis and characterization of a zirconium metal organic framework containing a platinum pincer complex Wade Student Presenter Rachel Voss (Brandeis / Chemistry) Poster # 2016.668 Title Oxidation induced breathing effects in chromium azolate MOFs Wangh Ruth-Love Damoah (Brandeis / 2016.696 Biology) John Deng (Brandeis / Biology) 2016.678 One in a Million: Sensitive Molecular Assay for TB Point of Care Testing. Kimberly Montano (Brandeis / 2016.654 Biology, Sociology) Human Papilloma Virus and Cervical Cancer: Detecting High-Risk mixed infections using single-closed tube LATE-PCR Species Identification: Closed-Tube Barcoding of Naegleria Species Wingfield Zoe Brown (Brandeis / Neuroscience, Psychology) 2016.673 Effects of Hearing Acuity on Use of Prosody in Speech Comprehension Emily Cohen (Brandeis / Psychology, Linguistics) 2016.674 Investigating the effect of self-paced listening on the relationship between hearing acuity and speech recall Austin Luor (Brandeis / Biology, Neuroscience) 2016.633 Examining the physiological changes of pupil dilation with increasing complexity of auditory stimuli Richard Haburcak (Brandeis / Chemistry, Mathematics) 2016.662 Ligand-Receptor Interaction Modulates Energy Landscape of Enzyme-Instructed Assembly of Small Molecules Yujie Jiang (Brandeis / Chemistry) 2016.635 Enzyme-Regulated Self Assembly of Cholesterol Conjugates Against Drug-Resistant Ovarian Cancer Cells Adrianna Shy (Hampton University / Chemistry) 2016.618 Reconstruction of beta-sheet peptides and an analysis of their selfassembling abilities Xu Natsuko Yamagata (Brandeis / 2016.669 Chemistry) Exploring the Unexplored: Supramolecular Hydrogels of Retro-Inverso Peptides for 3D Cell Culture