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Aldehyde
Dehydrogenase
Zach Lawton
1
Background
•
Superfamily of Nictonamide adenine dinucleotide phosphate (NADP)
enzymes
•
Location: all three domains of life
 Three subclasses of enzymes in eukaryotes
 Cytosol, mitochondria, endoplasmic reticulum and cornea
•
Function: catalyze aldehyde to carboxylic acid
•
Importance:
 Metabolism
 Removal of toxic aldehydes
 UV damage to the cornea
 Hangovers
2
Amino Acid Sequence Alignment
Lys 192
Cys 302
Glu 268
3
Structure—ALDH2
•
Expressed as tetramer or octamer in
most cases.
•
Mitochondria ALDH2 shown.
•
Percentage of alpha helix and beta
sheets vary between each protein and
class of ALDH.
•
ALDH1 ALDH2
 ~40% α-helix, ~35% β-sheet
•
ALDH3
 ~35% α-helix, ~5% β-sheet
Alpha Helix – Yellow
Beta Sheet – Blue
PDB = 1O05
4
Active Site—ALDH1 and ALDH2
•
NAD(P)+ binds into the pocket
where it is stabilized by Lys192.
•
Interactions with Cys302 and
Glu268.
•
Mg2+ is used as a catalysis.
Miller, S.J., Hurley, T.D. (2003) Coenzyme Isomerization is
Intergral to Catalysis in Aldehyde. ACS Biochemistry. 42,
7100-7109.
5
Reaction Mechanism
6
Conclusion
•
ALDH is a NAD/P+ Enzyme superfamily.
•
Primary function: Converts aldehyde to carboxylic acid using Cystine and
Glutamate residues.
•
Three Subclasses
 ALDH1
 Cytosol
 ALDH2
 Mitochondria, Endoplasmic reticulum
 ALDH3
 Cornea and Liver
QUESTIONS?
7