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Basic Chemistry Elements • • • • A substance made up of only one kind of atom 92 naturally occurring >20 occur in the human body Standard symbols H Fe O N Ca C The elements that equal 99% of the human body are carbon, hydrogen, oxygen, nitrogen, phosphorus, sulfur, and calcium. Others elements include sodium (Na), potassium (K), Chlorine (Cl), iron (Fe), copper (Cu), Iodine (I), magnesium (Mg), and zinc (Zn). Atoms • • • • The smallest part of an element Protons and neutrons in the nucleus Electrons in the shell Electrical charge • Neutron = neutral • Proton= positive • Electron= negative Dalton’s Atomic Theory 1.All matter is composed of extremely small particles called atoms. 2.All atoms of a given element are identical in size, mass, and other properties. Atoms of different elements differ in size, mass, and other properties. 3.Atoms cannot be subdivided, created, or destroyed. 4.Atoms of different elements can combine in simple, whole-number ratios to form compounds. 5.In chemical reactions, atoms are combined, separated, or rearranged Compounds • The union of two different kinds of atoms • Bonds form between atoms • • • • Ionic Covalent Disulfide Hydrogen • Bonds are a force that keep atoms joined Ionic Bonds Covalent Bonds O2 Covalent Bonds Disulfide bonds • A covalent bond • 2 atoms of sulfur within the same larger molecule Hydrogen Bonds • Does not involve the donation or sharing of electrons • Weak bonds • Responsible for surface tension of water Chemical Reactions • Synthesis Reactions • Bonds are formed • New compounds created • Decomposition reactions • Large molecule is broken into smaller ones • E.g. digestion Inorganic compounds of importance – water, oxygen, carbon dioxide Water makes up 55% -70% of the human body. Functions Solvent. Lubricant. Maintain body temperature Changes temperature slowly. Transportation of nutrients and waste Essential for chemical reactions Water compartments – intracellular. Extracellular: plasma, tissue fluid, lymph. Water • Makes up 60 – 75% of the human body • Functions • • • • • Solvent Lubricant Maintain body temperature Transportation of nutrients and waste Essential for chemical reactions Where is the water? • Intracellular fluid: 65% of body water • Extracellular fluid: 35% of body water • • • • Plasma Lymph Tissue fluid or interstitial fluid Specialized fluids • CSF • Synovial • Aqueous humor Oxygen • • • • • 21% of atmospheric gas Essential for cellular respiration Cells use oxygen to release ATP for energy CO2 is produced during cellular respiration Oxygen is exchanged for carbon dioxide Cell respiration: Glucose + O2 CO2 + H2O + ATP + heat Trace Elements • • • • • • • • • Needed by the body in small amounts Obtained in the diet AKA: minerals Iron (Fe) Cobalt Magnesium (Mg++) Iodine Calcium Phosphorus Of Acids, Bases and Balance • Acids • Substances that increase the hydrogen ion concentration • Bases • Substances that decrease the hydrogen ion concentration • pH • • • • • Parts hydrogen Values from 0 to 14 The lower the number the higher the H+ ion concentration 7 in neutral Blood is very slightly alkaline: 7.35- 7.45 Acids, bases, and pH The pH scale: 0 to 14; pH 7 is neutral. pH below 7: pH above 7: An acid increases the H+ concentration of a solution. A base decreases the H+ concentration. Cellular pH: 6.8 to 7.0; blood pH: 7.35 to 7.45. Buffer systems prevent sudden and drastic changes in the pH of body fluids. Buffer systems • Chemicals or pairs of chemicals that react to minimize change • H2CO3 (carbonic acid), a weak acid • NaHCO3 (bicarbonate), a weak base • Pair present in all body fluids • Carbonic acid ionizes to become: H+ + HCO3• Bicarbonate ionized to become: Na+ + HCO3• A strong acid (HCl) added to extracellular fluid combines with Bicarbonate (the weak base) to become: NaCL + H2CO3 • A strong base combine (NaOH) combines with the weak acid to become: H2O + NaHCO3 • The usual ratio of buffers is 20 bicarbonate: 1 carbonic acid Organic compounds of importance All contain carbon and hydrogen covalently bonded; many contain oxygen, nitrogen, or other elements. The four major groups: Carbohydrates Lipids Proteins Nucleic acids Carbohydrates • • • • CHO Serve as sources of energy in cell respiration Saccharide means sugar Classified as • Monosaccharides • Glucose, fructose, galactose • Pentose not involved in energy but structural components of RNA • Disaccharides • Sucrose= glucose + fructose • Lactose = glucose + galactose • Maltose = glucose + glucose • Oligosaccharides • Chains of 3 -20 Monosaccharides • Indigestible • On outer surfaces of cell membranes • Polysaccharides • Composed of thousands of glucose molecules Carbohydrates cont’d • Glycogen • • • • Highly branched chain of glucose Synthesized in the liver Storage form of glucose Stored primarily in the liver and in small amounts in skeletal muscle • Cellulose • • • • • • Straight chains of glucose molecules Produced by plants as part of their cell walls Humans do not have the enzymes to digest them “Fiber” Exercises the gut Prevent constipation Lipids (see Table 2–4) True fats – fatty acids and glycerol. Triglycerides – stored energy. Phospholipids – diglyceride + phosphate. Part of cell membranes. Steroids – based on cholesterol. Vitamin D, steroid hormones. Lipids • Neutral or true fats • Glycerol and 1, 2, or 3 fatty acid molecules • 3 fatty acids = triglyceride • 2 fatty acids = diglyceride • 1 fatty acid = monoglyceride • Saturated vs. unsaturated Other fats • Phospholipids • Diglycerides with a phosphate group • Structural components of cells • E.g.: myelin, parts of cell membranes • Steroids • • • • • Cholesterol 4 rings of carbon and hydrogen Synthesized in the liver Significant component of cell membranes Precursor of steroid: estrogen, testosterone and of vitamin D Proteins – made of amino acids (General functions: see Table 2–5) Primary structure – sequence of amino acids. Secondary structure – simple folding. Tertiary structure – more complex folding. Quaternary structure – two or more amino acid chains. Excess amino acids in the diet can be converted to simple carbohydrates. Proteins • • • • • • Built of smaller units called amino acids 20 amino acids 8 are essential Sequence of amino acids is specific for each type of protein Building blocks for tissues, Enzymes Nucleic acids – DNA and RNA Made of subunits called nucleotides. Nucleotide – a pentose sugar: deoxyribose or ribose. a phosphate group. a nitrogenous base: adenine, guanine, thymine, cytosine, and uracil. DNA is a double helix. RNA is a single strand. DNA and RNA • Large molecules • Consist of smaller subunit • nucleotides Nucleic acids (continued; see Table 2–6) DNA is found in chromosomes. Function: RNA functions in the process of protein synthesis. ATP – adenosine triphosphate; an energy transfer molecule. Enzymes • Catalysts: speed up chemical reactions • Specific to the reaction needed • Shape determines function Wrap-Up Question Give the proper term for each brief description. 1. A bond-forming reaction 2. The water within cells 3. A pH of 7.4 4. Energy production within cells 5. Energy storage form in the liver 6. Proteins that catalyze reactions 7. The lipids of cell membranes 8. An energy transfer molecule Most of the body’s fluid is contained __________ • 2. Define: • A covalent bond • An ionic bond • A hydrogen bond • A disulfide bond • 1.