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Curriculum vitae SRINIVAS V. RAMASWAMY 382 Finch Road, Raynham, MA 02767 Email:[email protected]. Tel : (508)-821-2594 Goals: Microbiologist seeking immediate work in antimicrobial drug discovery and development or QC/QA in the biotech/pharma industries located in MA. WORK EXPERIENCE Staff Scientist, 2005-2010; SelectX Pharmaceuticals, Inc., Worcester, MA • Initiated antimicrobial screening division for drug discovery projects. • Wrote several SOP’s for various assays and supervised technicians. • Screen for novel chemical derivatives targeted primarily against multi-drug resistant Pseudomonas, Klebsiella, Acinetobacter, E. coli, Staphylococcus and other gram negative and gram positive bacteria. • CDC, FDA, ASM, and CLSI guidelines for drug susceptibility testing. • Drug resistance mechanisms of aminoglycosides, carbapenems and other beta-lactams. • Successfully identified next generation aminoglycoside for pre-clinical development and IND studies. • Reference: Michael Chaparian, CEO and supervisor, Tel: 508-798-0216 • Michael Brady, Group leader Tel: 508-798-0216X117 EDUCATION Research Associate, 2003-2005; Harvard Medical School, Boston, MA • Molecular characterization of Group B Streptococcus. • PCR, multi-locus sequence typing (MLST), DNA sequence analysis of capsular polysaccharide genes. • Genetic analysis of capsular genes in clinical isolates to determine nontypable phenotype. • Reference: Larry Paoletti, Ph.D Tel: 617-525-2270 Post-doctoral Associate, 1997-2003; Baylor College of Medicine, Houston, TX • Molecular epidemiology and genetic basis for drug resistance in Mycobacterium tuberculosis and Staphylococcus aureus. • PCR, multiplexing, microbial and human genome database mining, spectroscopy, automated DNA sequencing and SNP analysis. • Supervision of technicians, writing manuscripts and poster presentations. • Reference: Ed Graviss, Ph.D, Tel: 713-798-8097 Ph.D in Microbiology, 1997, University of Oklahoma, Department of Microbiology, Norman, OK. • Identification and characterization of calcofluor white binding deficient mutants in Myxococcus xanthus. • Critically evaluate various aspects of research in microbiology and molecular biology, teach undergraduate microbiology laboratory courses. • Prokaryotic development, cell motility, cell-cell communication, gene expression, microbial genetic analysis • Molecular techniques including light and electron microscopy, DNA extraction, restriction digestion, transformation, transduction, cloning, UV and transposon mutagenesis, motility assays, microbial selection and screens, DNA hybridization • Reference: John Downard, Ph.D, Tel: 405-325-6302 Bachelor of Medicine & Bachelor of Surgery (MBBS), 1987, Mysore Medical College, Mysore, India • Clinical aspects of medicine and surgery TECHNICAL SKILLS • • • • • • • • • • • • Clinical microbiology, staining, aseptic techniques, stock culture maintenance Microbial identification, microbial quantitation, sterilization Knowledgeable in bioburden, LAL (endotoxin testing), medical device, ET Microbial selection and screens, spontaneous mutation frequency Drug susceptibility testing (CLSI guidelines), MIC, time-kill kinetics Synergy testing, post-antibiotic effect, drug resistance mechanisms Light and electron microscopy, spectroscopy, plate readers DNA extraction, restriction digestion, transformation, transduction, cloning UV and transposon mutagenesis, PCR, multiplexing, hybridizations DNA sequencing, SNP discovery, human & microbial genome database mining Total protein and beta-galactosidase assays, ELISA, robotic liquid handling Supervision of technicians, manuscript writing, poster presentations. COMPUTER SKILLS • PC and Macintosh computers-Word, Excel, Powerpoint, Pages, Numbers • MacVector, Lasergene- DNASTAR, EditSeq, Megalign, NCBI resources SELECTED PUBLICATIONS (Total published = 26) Ramaswamy, S. V., P. Ferrieri, A. E. Flores, and L. C. Paoletti. 2006. Molecular characterization of nontypable Group B Streptococcus. J. Clin. Microbiol. 44:2398-2403. Times cited – 14. Biçmen, M., Z. Gülay, S. V. Ramaswamy, D. M. Musher, and D. Gür. 2006. Analysis of mutations in the pbp genes of penicillin-nonsusceptible pneumococci from Turkey. Clin. Microbiol. Infect. 12:150-155. Times cited – 7. Koreen, L., S. V. Ramaswamy, S. Naidich, I. V. Koreen, G. R. Graff, E. A. Graviss, and B. N. Kreiswirth. 2005. Comparative sequencing of the serineaspartate repeat region of clumping factor B gene (clfB) for resolution within clonal groups of Staphylococcus aureus. J. Clin. Microbiol. 43:3985-3994. Times cited – 10. Shukla, S. K., M. E. Stemper, S. V. Ramaswamy, J. M. Conradt, R. Reich, E. A. Graviss, and K. D. Reed. 2004. Molecular characteristics of nosocomial and Native American community-associated Methicillin-resistant Staphylococcus aureus clones from rural Wisconsin. J. Clin. Microbiol. 42:3752-3757. Times cited – 50. Ramaswamy, S. V., S. Dou, A. Rendon, Z. Yang, M.D. Cave, and E. A. Graviss. 2004. Genotypic analysis of multidrug-resistant Mycobacterium tuberculosis isolates from Monterrey, Mexico. J. Med. Microbiol. 53:107-113. Times cited – 46. Ramaswamy, S. V., R. Reich, S-J. Dou, L. Jasperse, X. Pan, A. Wanger, T. Quitugua, and E. A. Graviss. 2003. Identification of Single Nucleotide Polymorphisms (SNPs) in Genes Associated with Isoniazid Resistance in Mycobacterium tuberculosis. Antimicrob. Agent Chemother. 47:1241-1250. Times cited - 121. Ramaswamy, S., and J. M. Musser. 1998. Molecular genetic basis of antimicrobial agent resistance in Mycobacterium tuberculosis: 1998 update. Tubercle Lung Dis. 79(1):3-29. Times cited - 445. Mdluli, K., R. A. Slayden, Y. Zhu, S. Ramaswamy, X. Pan, D. Mead, D. D. Crane, J. M. Musser, and C. E. Barry III. 1998. Inhibition of a Mycobacterium tuberculosis β-ketoacyl ACP synthase by isoniazid. Science. 280:1607-1610. This work was recognized by several newsletters including NIAID News, Houston Chronicle, and Texas Medical Center News. Times cited – 285. Ramaswamy, S., M. Dworkin, and J. Downard, 1997. Identification and characterization of Myxococcus xanthus mutants deficient in calcofluor white binding. J. Bacteriol. 179:2863-71. Times cited - 27. SELECTED MEETING ABSTRACTS (Total published = 31) Ramaswamy, S., P. Ferrieri, A. E. Flores, and L. C. Paoletti. 2005. Molecular characterization of nontypable Group B Streptococcus. The XVIth Lancefield International Symposium on Streptococci and Streptococcal Diseases, Cairns, Australia. Shukla, S. K., S. V. Ramaswamy, M. Stemper, J. Conradt, R. Reich, E. A. Graviss, and K. D. Reed. 2004. Molecular Characterization of Community-Associated Methicillin-Resistant Staphylococcus aureus from Native American Communities in Rural Wisconsin. 104th ASM general meeting, New Orleans, LA. Ramaswamy, S. V., R. Reich, S-J. Dou, L. Jasperse, X. Pan, A. Wanger, T. Quitugua, and E. A. Graviss. 2002. Identification of Mutations in Several New Genes Associated with Isoniazid Resistance in Mycobacterium tuberculosis. 102rd ASM general meeting, Salt Lake City, UT. Ramaswamy, S. V., E. A. Graviss, N. Kurepina, and B. N. Kreiswirth. 2001. Mutations in pncA Distinguishes a Primary Spread and Acquired Resistance in Two Multi-drug Resistant Mycobacterium tuberculosis Cohorts. Diagnostic approaches for infectious disease: Future promises and impact on clinical management. Meeting sponsored by IDSA, CDC, FDA, and NIAID, and held at Orlando, FL. Ramaswamy, S. V., A. G. Amin, S. Göksel, C. E. Stager, S-J. Dou, H-E. Sahly, S. L. Moghazeh, B. N. Kreiswirth, and J. M. Musser. 2000. Molecular genetic analysis of nucleotide polymorphisms associated with ethambutol resistance in human isolates of Mycobacterium tuberculosis. 100th ASM general meeting, Los Angeles, CA. Ramaswamy, S., C. E. Stager, H. Soini, A. Amin, L. A. Basso, J. S. Blanchard, S. L. Moghazeh, R. A. Slayden, C. E. Barry III, B. N. Kreiswirth, and J. M. Musser. 1999. Comprehensive analysis of molecular genetic polymorphisms associated with isoniazid resistance in human isolates of Mycobacterium tuberculosis . 99th ASM general meeting, Chicago, IL. Ramaswamy, S., and J. Downard. 1996. Identification and characterization of calcofluor white binding deficient mutants in Myxococcus xanthus. Presented at the 23rd annual meeting on the biology of myxobacteria, Angel fire, NM. TEACHING EXPERIENCE Supervised and trained technical staff at the Baylor College of Medicine Taught the following laboratory courses at the University of Oklahoma: M2815 - Introduction to Microbiology for non-majors M3815 - Introduction to Microbiology for majors M3942 - Instrumental methods in Biology Laboratory M4845 - Pathogenic Microbiology AWARDS Recipient of Government of India National Merit Scholarship RESIDENT STATUS Citizen of the United States