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ENTEROBACTERIACEAE Dr.Babasaheb N. Kumbhar M.V.Sc [email protected] Enterobacteriaceae Habitat digestive tube(colon) of human and animals 150 Species Facultative anaerobes Diarrheal illnesses 3 million death/year 4 billion infectoions/ worldwide Enterobacteriaceae Classification – more than15 different genera Escherichia Shigella Edwardsiella Salmonella Citrobacter Klebsiella Enterobacter Hafnia Serratia Enterobacteriaceae Proteus Providencia Morganella Yersinia Erwinia Pectinobacterium Family Enterobacteriaceae Certain E .coli strains can be considered true pathogens True pathogen (nonmotile) (nonmotile) True pathogen True pathogen Morphology and General Characteristics Are facultative anaerobes Gram-negative, non-sporing, rod shaped bacteria If motile, motility is by peritrichous flagella(Except Shigella & Klebsiella) Many are normal inhabitants of the intestinal tract of man and other animals Some are enteric pathogens and others are urinary or respiratory tract pathogens Differentiation is based on biochemical reactions and differences in antigenic structure Morphology and Physiology Short gram-negative rods. Facultative anaerobes. Grow readily and rapidly on simple media. K. pneumoniae Klebsiella spp. have large capsule (form large and very mucoid colonies); those of Enterobacter have smaller capsule; the others produce diffusible slime layers (form circular, convex and smooth colonies). ENTEROBACTERIACEAE PHYSIOLOGY Glucose is fermented with strong acid formation and often gas Reduce nitrates to nitrite Do not liquify alginate Oxidase negative Basis for speciation within a family - differences in carbohydrate they ferment - variations in end-product production - variation in substrate utilization Enterobacteriaceae Meningitis Opportunistic pathogens Pneumonia Escherichia coli Klebsiella pneumoniae Sepsis Enterobacter aerogenes Serratia marcescens Diarrhea Proteus spp. Providencia spp. Citrobacter spp. Obligate pathogens Salmonella spp. Shigella spp. Yersinia spp. Some E. coli strains UTI Incidence of Enterobacteriaceae Associated with Bacteremia CULTURAL CHARACTERISTICS On non differential or nonselective media blood agar or infusion agar - no species distinction - appear as moist, smooth, gray colonies Selective media -To isolate Shigella and salmonella from fecal matter Differential media – selectively inhibit gram-positive organisms and to separate enterics in broad categories Modes of Infection • Contaminated food and water (Salmonella spp., Shigella spp., Yersinia enterocolitica, Escherichia coli O157:H7) • Endogenous (urinary tract infection, primary bacterial peritonitis, abdominal abscess) • Abnormal host colonization (nosocomial pneumonia) • Transfer between debilitated patients • Insect (flea) vector (unique for Yersinia pestis) Urinary Tract Infection, Pneumonia • Escherichia coli, Klebsiella pneumoniae, Enterobacter spp., and Proteus mirabilis • Pneumonia: Enterobacter spp., Klebsiella pneumoniae, Escherichia coli, and Proteus mirabilis • Wound Infection: Escherichia coli, Enterobacter spp., Klebsiella pneumoniae, and Proteus mirabilis • Bacteremia: Escherichia coli, Enterobacter spp., Klebsiella pneumoniae, and Proteus mirabilis Intestinal Infection • • • • • • Shigella sonnei (serogroup D) Salmonella serotype enteritidis Salmonella serotype typhimurium Shigella flexneri (serogroup B) Escherichia coli O157:H7 Yersinia enterocolitica MacConkey (MAC) Agar Eosin Methylene Blue (EMB) Agar (Levine) Antigenic Structure – Most are motile by peritrichous flagella --H antigens. – Capsule – K antigen ( Vi for Salmonella). – Cell envelope (wall) – LPS (endotoxin) – O antigen. – various outer membrane proteins. – Pili - various antigen types, some encoded by plasmids Pathogenesis and Immunity Common virulence factors Endotoxin (Lipid A of LPS) Capsule Antigenic phase variation Acquisition of growth factors (e.g. Fe) Resistance to serum killing Antimicrobial resistance Type III secretion systems: possessed by some Enterobacteriaceae pathogens, e.g., E. coli, Yersinia, Salmonella, and Shigella; facilitate transport of bacterial virulence factors directly into host cells. HE Agar: Growth of Enteric Pathogens and Commensals Escherichia coli Toxins: two types of enterotoxin; Shiga-type toxin; Enteroaggregative ST-like toxin; Hemolysins; Endotoxin Virulence factors that protect the bacteria from host defenses: Capsule/Iron capturing ability (enterochelin) E. coli May be hemolytic on CBA – more common in pathogenic strains KEY tests for the normal strain: TSI is A/A + gas LIA K/K Urea – Indole + Citrate – Motility + There is an inactive biotype that is anaerogenic, lactose –, and nonmotile. Enteropathogenic E. coli fever infant diarrhea vomiting nausea non-bloody stools Destruction of surface microvilli loose attachment mediated by bundle forming pili (Bfp); Stimulation of intracellular calcium level; rearrangement of intracellular actin, Enterotoxigenic E. coli A watery diarrhea, nausea, abdominal cramps and low-grade fever for 1-5 days. Travellers diarrhea and diarrhea in children in developing countries Transmission is via contaminated food or water. E.coli-Enteroinvasive (EIEC) The organism attaches to the intestinal mucosa via pili Outer membrane proteins are involved in direct penetration, invasion of the intestinal cells, and destruction of the intestinal mucosa. There is lateral movement of the organism from one cell to adjacent cells. Symptoms- fever,severe abdominal cramps, malaise, and watery diarrhea followed by scanty stools containing blood, mucous,& pus. resembles shigellosis E.coli-c. Enteropathogenic (EPEC) Malaise and low grade fever diarrhea, vomiting, nausea, nonbloody stools Bundle forming pili are involved in attachment to the intestinal mucosa. This leads to changes in signal transduction in the cells, effacement of the microvilli, and to intimate attachment via a non-fimbrial adhesion called intimin. This is a problem mainly in hospitalized infants and in day care centers. Enterohemorrhagic (EHEC) Hemorrhagic – bloody, copious diarrhea – few leukocytes – afebrile hemolytic-uremic syndrome – hemolytic anemia – thrombocytopenia (low platelets) – kidney failure • Usually O157:H7 Transmission electron micrograph Enteroaggregative E. coli a cause of persistent, watery diarrhea with vomiting and dehydration in infants. That is autoagglutination in a ‘stacked brick’ arrangement. the bacteria adheres to the intestinal mucosa and elaborates enterotoxins (enteroaggregative heat-stable toxin, EAST). The result is mucosal damage, secretion of large amounts of mucus, and a secretory diarrhea. Shigella Shigella species Shigella Contains four species that differ antigenically and, to a lesser extent, biochemically. S. dysenteriae (Group A) S. flexneri (Group B) S. boydii (Group C) S. sonnei (Group D) bacillary dysentery, shigellosis, bloody feces, intestinal pain, pus Biochemistry TSI K/A with NO gas LIA K/A Urea – Motility All ferment mannitol except S. dysenteriae S. sonnei may show delayed lactose fermentation Shiga toxin 1. Chromosomally encoded 2. Neurotoxic 3. Enterotoxic 4. Cytotoxic Enterotoxicity can make the disease clinically appear as a diarrhea. The toxin inhibits protein synthesis (acting on the 60S ribosome and lysing 28S rRNA). Clinical significance man only "reservoir" mostly young children – fecal to oral contact – children to adults transmitted by adult food handlers – unwashed hands Diagnosis of Shigella infection 1. 2. Specimen: stool. Culture and Identification Quick immunological methods: Immunofluorescent “ball” test; Coagglutination. XLD Agar: Growth of Shigella and Proteus Salmonella Only a few types that are commonly associated with characteristic human diseases 1. S. enteritidis 2. S. cholerae-suis 3. S. typhi several syndromes including gastroenteritis, enteric (typhoid) fever or septicemia Salmonella Biochemistry TSI K/A + gas and H2S: S. typhi produces only a small amount of H2S and no gas , and S. paratyphi A produces no H2S LIA K/K with H2S with S. paratyphi A giving K/A results Urea – Motility + Citrate +/Indole - Virulence factors Endotoxin – may play a role in intracellular survival Capsule (for S. typhi and some strains of S. paratyphi) Adhesions – both fimbrial and non-fimbrial Salmonella typhi • The organism is transmitted from: 1. a human reservoir 2. in the water supply (if poor sanitary conditions) 3. in contaminated food The antigenic structures of salmonellae used in serologic typing Virulence factors Endotoxin – may play a role in intracellular survival Capsule (for S. typhi and some strains of S. paratyphi) Adhesions – both fimbrial and non-fimbrial Type III secretion systems and effector molecules – 2 different systems may be found: – One type is involved in promoting entry into intestinal epithelial cells – The other type is involved in the ability of Salmonella to survive inside macrophages Outer membrane proteins - involved in the ability of Salmonella to survive inside macrophages Flagella – help bacteria to move through intestinal mucous Enterotoxin - may be involved in gastroenteritis Iron capturing ability XLD Agar: Appearance of Salmonella Diagnosis A. Specimens a) Enteric fever: blood, bone marrow, stool, urine. b) Food poisoning: stool, vomitus, suspected food. c) Septicemia: blood. B. Culture and identification C. Widal test Klebsiella NF of GI tract, but potential pathogen in other areas TSI A/A + gas LIA K/K Urea + Citrate + MR-, VP+ Motility Has both O and K antigens Klebsiella Virulence factors K.Pneumoniae on BA and MAC Capsule Adhesions Iron capturing ability Clinical significance Causes pneumonia, mostly in immunocompromised hosts. Permanent lung damage is a frequent occurrence (rare in other types of bacterial pneumonia) A major cause of nosocomial infections such as septicemia and meningitis K.Pneumoniae On BA Proteus General characteristics: “swarming” phenomenon on nonselective agar (P.vulgaris; P.mirabilis and P.myxofaciens) P.vulgaris strains (OX-19, OX-K, OX-2)have common antigen with Rickettsia (Weil-Felix test). urinary tract infections; food poisoning. Some enteric bacteria are motile. Klebsiella species are not motile, while Proteus species move very actively by means of peritrichous flagella, resulting in "swarming" on solid medium. Some strains of E. coli produce hemolysis on blood plates. Proteus spp. CITROBACTER Resident of soil, water, stool • C.freundii • UTI and bacteremia Serratia Serratia A free-living saprophyte TSI A/A or K/A; +/- gas (does not ferment lactose) LIA usually K/K Citrate + Motility + Urea +/Has been found in RT and UT infections Is resistant to many antimicrobics Negative test e.g. Klebsiella Positive test e.g. E. coli Citrate Utilization Test Urease Test Positive test Indole test Negative test Special Features: Positive Klebsiella, Enterobacter Negative E. coli Used in the differentiation of genera and species. e.g. E. coli (+) from Klebsiella (-). Results MR/VP test Methyl Red test Red: Positive MR (E. coli) Voges-Proskauer test Pink: Positive VP (Klebsiella) No pink: Negative VP (E. coli) Yellow or orange: Negative MR (Klebsiella) Summary of morphology, cultural characteristics, and biochemical reactions of Enterobacteriaceae Gram stain Oxidase Nitrate reductase O/F MacCon key SS EMB E. coli -ve rod -ve +ve O+/F+ LF LF Metallic sheen Citrobacter -ve rods -ve +ve O+/F+ LF LF Dark Klebsiella -ve rods -ve +ve O+/F+ LF LF Dark Enterobacter -ve rods -ve +ve O+/F+ LF LF Dark Salmonella -ve rods -ve +ve O+/F+ NLF NLF/ H2S Colorless Shigella -ve rods -ve +ve O+/F+ NLF NLF Colorless Proteus -ve rods -ve +ve O+/F+ NLF NLF/ H2S Colorless Summary of morphology, cultural characteristics, and biochemical reactions of Enterobacteriaceae TSI Indole MR VP Citrate Urease Motility E. coli A/A/- +ve +ve -ve -ve -ve Motile Citrobacter freundii A/A/- +ve +ve -ve +ve -ve Motile Klebsiella pneumoniae A/A/- -ve -ve +ve +ve +ve Non motile Enterobacter cloacae A/A/- -ve -ve +ve +ve +ve Motile Salmonella typhi A/Alk/+ -ve +ve -ve +ve -ve Motile Shigella boydii A/Alk/- -ve +ve -ve -ve -ve Non motile Proteus mirabilis A/Alk/+ -ve +ve -ve +ve +ve Motile Swarwing Oxidase Test Negative Positive Enterobacteriaceae Pseudomonas MacConkey’s agar & TSI O/F test: O+/F- Nitrate test: +ve further reduction to N2 colorless colonies on MacConkey Pink colonies on MacConkey & acidic butt and slant on TSI & acidic butt alkaline slant onTSI Growth on cetrimide agar: Lactose non-fermenter Pale colonies with green pigmentation Lactose fermenter IMViC test & EMB No H2S production (no blacking in TSI) IMViC IMViC ++ - - - ++ & black colonies Motility with metalic shines on EMB Shigella H2S production (blacking in TSI) Urease production +ve SS agar Not motile E.coli Klebsiella -ve Motile Proteus colorless colonies with black centers Salmonella References: •www.slideshare.net