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Chapter 2 Chemistry, Matter, and Life Copyright © 2015 Wolters Kluwer Health | Lippincott Williams & Wilkins Key Terms acid chemistry ion salt amino acid colloid isotope solute anion compound lipid solution aqueous denaturation molecule solvent atom electrolyte nucleotide steroid base electron neutron substrate buffer element pH suspension carbohydrate enzyme protein valence catalyst glucose proton cation glycogen radioactive Copyright © 2015 Wolters Kluwer • All Rights Reserved Chemistry • Science that deals with matter’s composition and properties • Used to understand normal and abnormal body function Copyright © 2015 Wolters Kluwer • All Rights Reserved Elements (cont.) Matter • The substances from which the universe is made Elements • All of the different types of matter • Identified by names or chemical symbols • Also identified by number • Described and organized in the periodic table 11 Sodium Na 22.99 Copyright © 2015 Wolters Kluwer • All Rights Reserved Elements (cont.) Appendix 1 Periodic Table of the Elements What is the symbol and number for carbon? Copyright © 2015 Wolters Kluwer • All Rights Reserved Elements (cont.) Table 2-1 Some Common Elements Name Oxygen Symbol O Function Part of water; needed to metabolize nutrients for energy Carbon C Hydrogen H Nitrogen N Calcium Ca Phosphorus P Potassium K Basis of all organic compounds; component of carbon dioxide, the gaseous byproduct of metabolism Part of water, participates in energy metabolism; determines the acidity of body fluids Present in all proteins, ATP (the energy-storing compound), and nucleic acids (DNA and RNA) Builds bones and teeth; needed for muscle contraction, nerve impulse conduction, and blood clotting Active ingredient in ATP; builds bones and teeth; component of cell membranes and nucleic acids Active in nerve impulse conduction; muscle contraction Sulfur Sodium S Na Iron Fe The elements are listed in decreasing order by weight in the body. Part of many proteins Active in water balance, nerve impulse conduction, and muscle contraction Part of hemoglobin, the compound that carries oxygen in red blood cells Copyright © 2015 Wolters Kluwer • All Rights Reserved Elements (cont.) Living matter contains 26 of 92 natural elements. The body’s chemical composition by weight. • 96% of body weight— four elements • 4% of body weight— nine elements • 0.1% of body weight—13 elements Copyright © 2015 Wolters Kluwer • All Rights Reserved Elements (cont.) Atoms • Smallest subunits of elements • Cannot be broken down or changed by ordinary chemical and physical means Copyright © 2015 Wolters Kluwer • All Rights Reserved Elements (cont.) Atomic Structure • Nucleus – At atom’s center – Composed of • Protons; positively charged • Neutrons; not charged • Electrons – Negatively charged – Orbit in energy levels around the nucleus – Determine atom’s chemical reactivity Copyright © 2015 Wolters Kluwer • All Rights Reserved Elements (cont.) Figure 2-2 The oxygen atom. How does the proton number of this atom compare with the electron number? Copyright © 2015 Wolters Kluwer • All Rights Reserved Elements (cont.) Atomic Number 8 Oxygen • Equal to the number of protons in an atom’s nucleus. O • Also represents the number of electrons orbiting the nucleus. 16.00 • No two elements share the same atomic number. Copyright © 2015 Wolters Kluwer • All Rights Reserved Oxygen’s nucleus contains eight protons. Its atomic number is 8. Elements (cont.) Energy Levels • Regions around an atom’s nucleus where electrons orbit. • Each region has space for a specific number of electrons. – The first energy level has room for two electrons. – The second energy level has room for eight electrons. • An atom is most stable when its energy levels are filled with electrons. Copyright © 2015 Wolters Kluwer • All Rights Reserved Elements (cont.) Energy Levels (cont.) Hydrogen Carbon Total number of electrons 1 6 Number of electrons in first energy level 1 2 Number of electrons in second energy level 0 4 • Hydrogen has only one energy level with room for one more electron. • Carbon’s first energy level is full. • Carbon’s second energy level has room for four more electrons. Copyright © 2015 Wolters Kluwer • All Rights Reserved Elements (cont.) Energy Levels (cont.) • An atom will form chemical bonds with other atoms to fill its outermost energy level. An atom will donate, accept, or share electrons to fill its outermost energy level. Copyright © 2015 Wolters Kluwer • All Rights Reserved Elements (cont.) Figure 2-3 Examples of atoms. How many electrons does oxygen need to complete its outermost energy level? How does magnesium achieve a stable outermost energy level? Copyright © 2015 Wolters Kluwer • All Rights Reserved Elements (cont.) Pop Quiz 2.1 Which element makes up the greatest percentage of body weight? A) Nitrogen B) Oxygen C) Potassium D) Sodium Copyright © 2015 Wolters Kluwer • All Rights Reserved Elements (cont.) Pop Quiz Answer 2.1 Which element makes up the greatest percentage of body weight? A) Nitrogen B) Oxygen C) Potassium D) Sodium Copyright © 2015 Wolters Kluwer • All Rights Reserved Elements (cont.) Pop Quiz 2.2 The atomic number of iron is 26. How many protons does iron have? A) 13 B) 26 C) 39 D) 52 Copyright © 2015 Wolters Kluwer • All Rights Reserved Elements (cont.) Pop Quiz Answer 2.2 The atomic number of iron is 26. How many protons does iron have? A) 13 B) 26 C) 39 D) 52 Copyright © 2015 Wolters Kluwer • All Rights Reserved Chemical Bonds (cont.) • An atom forms chemical bonds with other atoms to fill its outermost energy level with electrons. – Electrons may be transferred between atoms. – Electrons may be shared between atoms. Copyright © 2015 Wolters Kluwer • All Rights Reserved Chemical Bonds (cont.) Valence The number of bonds an atom needs to fill its outermost energy level. Example • A carbon atom has six electrons. • Its outermost energy level contains four electrons. • It needs four more electrons to fill its outermost energy level. • Carbon’s valence is 4. Copyright © 2015 Wolters Kluwer • All Rights Reserved 6 Carbon C 12.01 Chemical Bonds (cont.) Ionic Bonds • Form when one atom transfers electrons to another atom – The atom that donates an electron becomes a positively charged cation. Na+ – The atom that accepts an electron becomes a negatively charged anion. Cl– – The ionic bond is the attraction between oppositely charged ions. Copyright © 2015 Wolters Kluwer • All Rights Reserved Na+ Cl– Chemical Bonds (cont.) Figure 2-4 Ionic bonding. How many electrons are in the outermost energy level of a sodium atom? Of a chlorine atom? Copyright © 2015 Wolters Kluwer • All Rights Reserved Chemical Bonds (cont.) Electrolytes • Compounds that separate into ions in solution • Term also used to refer to the ions themselves Example Sodium chloride (NaCl) is an electrolyte. When NaCl is added to water, it separates into Na+ and Cl− ions. Both Na+ and Cl− ions are electrolytes. Copyright © 2015 Wolters Kluwer • All Rights Reserved Chemical Bonds (cont.) Ions in the Body • Ions play important physiologic roles in body fluid. Examples Ion Functions Ca2+ Blood clotting, muscle contraction HCO3− pH regulation • Homeostasis maintains proper ion concentration. Copyright © 2015 Wolters Kluwer • All Rights Reserved Chemical Bonds (cont.) Ions in the Body (cont.) • Ions conduct electric currents in body fluid. • Measurement of a tissue’s electrical activity is used to diagnose disease. Examples Electrocardiogram A record of the heart’s electrical activity Electroencephalogram A record of the brain’s electrical activity Copyright © 2015 Wolters Kluwer • All Rights Reserved Chemical Bonds (cont.) Covalent Bonds • Form when two atoms share electrons • The most common chemical bond in the body • Types: – Nonpolar covalent bond • Electrons are shared equally. – Polar covalent bond • Electrons are shared unequally. Copyright © 2015 Wolters Kluwer • All Rights Reserved Chemical Bonds (cont.) Figure 2-5 A nonpolar covalent bond. How many electrons are needed to complete the energy level of each hydrogen atom? Copyright © 2015 Wolters Kluwer • All Rights Reserved Chemical Bonds (cont.) Figure 2-6 Formation of water. How many hydrogen atoms bond with an oxygen atom to form water? Copyright © 2015 Wolters Kluwer • All Rights Reserved Chemical Bonds (cont.) Molecules • Chemicals composed of two or more atoms held together with covalent bonds – Examples: O2, H2O Compounds • Chemicals composed of two or more different atoms held together by ionic or covalent bonds – Examples: NaCl, H2O, CO2 Copyright © 2015 Wolters Kluwer • All Rights Reserved Chemical Bonds (cont.) Pop Quiz 2.3 What bond forms between two atoms that share their electrons equally? A) Hydrogen bond B) Ionic bond C) Nonpolar bond D) Polar bond Copyright © 2015 Wolters Kluwer • All Rights Reserved Chemical Bonds (cont.) Pop Quiz Answer 2.3 What bond forms between two atoms that share their electrons equally? A) Hydrogen bond B) Ionic bond C) Nonpolar bond D) Polar bond Copyright © 2015 Wolters Kluwer • All Rights Reserved Chemical Bonds (cont.) Pop Quiz 2.4 Which term best describes the sodium ion (Na+)? A) Anion B) Atom C) Electrolyte D) Element Copyright © 2015 Wolters Kluwer • All Rights Reserved Chemical Bonds (cont.) Pop Quiz Answer 2.4 Which term best describes the sodium ion (Na+)? A) Anion B) Atom C) Electrolyte D) Element Copyright © 2015 Wolters Kluwer • All Rights Reserved Chemical Bonds (cont.) Pop Quiz 2.5 Which chemical is NOT a compound? A) CO2 B) H2O C) NaCl D) O2 Copyright © 2015 Wolters Kluwer • All Rights Reserved Chemical Bonds (cont.) Pop Quiz Answer 2.5 Which chemical is NOT a compound? A) CO2 B) H2O C) NaCl D) O2 Copyright © 2015 Wolters Kluwer • All Rights Reserved Mixtures (cont.) Table 2-2 Mixtures Type Definition Example Solution Homogeneous mixture formed when one substance (solute) dissolves in another (solvent) Table salt (NaCl) dissolved in water; table sugar (sucrose) dissolved in water Suspension Heterogeneous mixture in which one substance is dispersed in another but will settle out unless constantly mixed Red blood cells in blood plasma; milk of magnesia Colloid Heterogeneous mixture in which the suspended particles remain evenly distributed based on the small size and opposing charges of the particles Blood plasma; cytosol Copyright © 2015 Wolters Kluwer • All Rights Reserved Mixtures (cont.) The Importance of Water • Most abundant compound in body • Critical in all physiologic processes • Deficiency (dehydration) threatens health • Universal solvent • Stable liquid at ordinary temperatures • Participates in body’s chemical reactions Copyright © 2015 Wolters Kluwer • All Rights Reserved Mixtures (cont.) Pop Quiz 2.6 Which term describes a substance that dissolves another substance? A) Mixture B) Solute C) Solution D) Solvent Copyright © 2015 Wolters Kluwer • All Rights Reserved Mixtures (cont.) Pop Quiz Answer 2.6 Which term describes a substance that dissolves another substance? A) Mixture B) Solute C) Solution D) Solvent Copyright © 2015 Wolters Kluwer • All Rights Reserved Mixtures (cont.) Pop Quiz 2.7 Which substance is termed the universal solvent? A) An acid B) A base C) Carbon D) Water Copyright © 2015 Wolters Kluwer • All Rights Reserved Mixtures (cont.) Pop Quiz Answer 2.7 Which substance is termed the universal solvent? A) An acid B) A base C) Carbon D) Water Copyright © 2015 Wolters Kluwer • All Rights Reserved Acids, Bases, and Salts (cont.) Acid • A substance that releases hydrogen ions HCl H+ + Cl− Base • A substance that releases hydroxide ions and accepts hydrogen ions NaOH Na+ + OH− Salt • A substance formed by a reaction between an acid and a base HCl + NaOH NaCl + H2O Copyright © 2015 Wolters Kluwer • All Rights Reserved Acids, Bases, and Salts (cont.) The pH Scale • Measures the relative concentrations of hydrogen and hydroxide ions in a solution. – Scale from 0 (most acidic) to 14 (most basic). – Each unit represents a 10-fold change. • Normal body fluid pH range is between 7.35 and 7.45. – Acidosis: Body fluid pH less than 7.35 – Alkalosis: Body fluid pH greater than 7.45 Copyright © 2015 Wolters Kluwer • All Rights Reserved Acids, Bases, and Salts (cont.) Figure 2-7 The pH scale. What happens to the amount of hydroxide ion (OH–) present in a solution when the amount of hydrogen ion (H+) increases? Copyright © 2015 Wolters Kluwer • All Rights Reserved Acids, Bases, and Salts (cont.) Buffers • Chemicals that prevent sharp changes in H+ concentration • Are important in maintaining a relatively constant pH in body fluids Copyright © 2015 Wolters Kluwer • All Rights Reserved Acids, Bases, and Salts (cont.) Pop Quiz 2.8 Which substance always accepts hydrogen ions? A) An acid B) A base C) A buffer D) A salt Copyright © 2015 Wolters Kluwer • All Rights Reserved Acids, Bases, and Salts (cont.) Pop Quiz Answer 2.8 Which substance always accepts hydrogen ions? A) An acid B) A base C) A buffer D) A salt Copyright © 2015 Wolters Kluwer • All Rights Reserved Acids, Bases, and Salts (cont.) Pop Quiz 2.9 Which substance always has a pH below 7? A) An acid B) A base C) A buffer D) A salt Copyright © 2015 Wolters Kluwer • All Rights Reserved Acids, Bases, and Salts (cont.) Pop Quiz Answer 2.9 Which substance always has a pH below 7? A) An acid B) A base C) A buffer D) A salt Copyright © 2015 Wolters Kluwer • All Rights Reserved Acids, Bases, and Salts (cont.) Pop Quiz 2.10 Which substance is most important in maintaining a relatively constant pH in body fluids? A) An acid B) A base C) A buffer D) A salt Copyright © 2015 Wolters Kluwer • All Rights Reserved Acids, Bases, and Salts (cont.) Pop Quiz Answer 2.10 Which substance is most important in maintaining a relatively constant pH in body fluids? A) An acid B) A base C) A buffer D) A salt Copyright © 2015 Wolters Kluwer • All Rights Reserved Isotopes and Radioactivity (cont.) Isotopes • Forms of an element that have the same atomic number but different atomic weight – Different atomic weight because of a different number of neutrons Examples Isotope Proton Number Neutron Number Atomic Weight Carbon-12 6 6 12 Carbon-13 6 7 13 Carbon-14 6 8 14 • May be stable or unstable (radioactive) Copyright © 2015 Wolters Kluwer • All Rights Reserved Isotopes and Radioactivity (cont.) Radioactivity • Emission of atomic particles from an isotope Use of Radioactive Isotopes • Used in the treatment of cancer – Radiation penetrates and destroys tumor cells. • Used in diagnosis – Radioactive elements can be administered and detected internally to identify abnormalities—these are called tracers. Example: Radioactive iodine used to diagnose thyroid problems. Copyright © 2015 Wolters Kluwer • All Rights Reserved Isotopes and Radioactivity (cont.) Pop Quiz 2.11 A form of an element that differs in its atomic weight from other forms of that same element is a(n) ____________. A) Compound B) Ion C) Isotope D) Molecule Copyright © 2015 Wolters Kluwer • All Rights Reserved Isotopes and Radioactivity (cont.) Pop Quiz Answer 2.11 A form of an element that differs in its atomic weight from other forms of that same element is a(n) ____________. A) Compound B) Ion C) Isotope D) Molecule Copyright © 2015 Wolters Kluwer • All Rights Reserved Organic Compounds (cont.) Chemistry of Living Matter • Hydrogen, oxygen, carbon, and nitrogen make up 96% of body weight. Organic Compounds • Chemical compounds found in living things • Built on the element carbon • Main types – Carbohydrates – Lipids – Proteins Copyright © 2015 Wolters Kluwer • All Rights Reserved Organic Compounds (cont.) Carbohydrates • Monosaccharides – Basic units of carbohydrates • Disaccharides – Two monosaccharides linked together • Polysaccharides – Many monosaccharides linked together Carbohydrate Examples Monosaccharide Glucose Disaccharide Sucrose and lactose Polysaccharide Glycogen and starch Copyright © 2015 Wolters Kluwer • All Rights Reserved Organic Compounds (cont.) Figure 2-8 Examples of carbohydrates. What are the building blocks (monomers) of disaccharides and polysaccharides? Copyright © 2015 Wolters Kluwer • All Rights Reserved Organic Compounds (cont.) Lipids (Fats) • Triglycerides – Simple fat composed of glycerol and three fatty acids • Phospholipids – Complex lipid containing phosphorus • Steroids – Contain rings of carbon atoms (e.g., cholesterol) Lipid Functions Triglyceride Insulates body, protects organs, stores energy Phospholipid Main component of cell membranes Steroid Regulate body function (e.g., cortisol, sex hormones) Copyright © 2015 Wolters Kluwer • All Rights Reserved Organic Compounds (cont.) Figure 2-9 Lipids. How many carbon atoms are in glycerol? Copyright © 2015 Wolters Kluwer • All Rights Reserved Organic Compounds (cont.) Proteins • Contain nitrogen (and sometimes sulfur or phosphorus). • Found as structural materials and metabolically active compounds. • Composed of chains of amino acids held together by peptide bonds. • The overall three-dimensional shape of a protein is caused by folding. Copyright © 2015 Wolters Kluwer • All Rights Reserved Organic Compounds (cont.) Figure 2-10 Proteins. What part of an amino acid contains nitrogen? Copyright © 2015 Wolters Kluwer • All Rights Reserved Organic Compounds (cont.) Enzymes • Are proteins that speed up (catalyze) chemical reactions • Work on specific substrates • Are not used up or changed during a chemical reaction • Work via the “lock-and-key” mechanism • Denature in harsh conditions (e.g., extremes of temperature or pH) Copyright © 2015 Wolters Kluwer • All Rights Reserved Organic Compounds (cont.) Figure 2-11 Diagram of enzyme action. How does the shape of the enzyme before the reaction compare with its shape after the reaction? Copyright © 2015 Wolters Kluwer • All Rights Reserved Organic Compounds (cont.) Nucleotides • Composed of: – A nitrogenous base – A sugar (usually ribose or deoxyribose) – A phosphate group • Building blocks of DNA and RNA • One type is a component of ATP Copyright © 2015 Wolters Kluwer • All Rights Reserved Organic Compounds (cont.) Figure 2-12 Nucleotides. What does the prefix tri- in adenosine triphosphate mean? Copyright © 2015 Wolters Kluwer • All Rights Reserved Organic Compounds (cont.) Pop Quiz 2.12 Which element is the basis of organic chemistry? A) Carbon B) Hydrogen C) Nitrogen D) Oxygen Copyright © 2015 Wolters Kluwer • All Rights Reserved Organic Compounds (cont.) Pop Quiz Answer 2.12 Which element is the basis of organic chemistry? A) Carbon B) Hydrogen C) Nitrogen D) Oxygen Copyright © 2015 Wolters Kluwer • All Rights Reserved Organic Compounds (cont.) Pop Quiz 2.13 Which organic compound catalyzes metabolic reactions? A) Carbohydrate B) Enzyme C) Lipid D) Nucleotide Copyright © 2015 Wolters Kluwer • All Rights Reserved Organic Compounds (cont.) Pop Quiz Answer 2.13 Which organic compound catalyzes metabolic reactions? A) Carbohydrate B) Enzyme C) Lipid D) Nucleotide Copyright © 2015 Wolters Kluwer • All Rights Reserved Organic Compounds (cont.) Pop Quiz 2.14 Which organic compound is used to store genetic information? A) Carbohydrate B) Enzyme C) Lipid D) Nucleotide Copyright © 2015 Wolters Kluwer • All Rights Reserved Organic Compounds (cont.) Pop Quiz Answer 2.14 Which organic compound is used to store genetic information? A) Carbohydrate B) Enzyme C) Lipid D) Nucleotide Copyright © 2015 Wolters Kluwer • All Rights Reserved Organic Compounds (cont.) Pop Quiz 2.15 A substance that has a name ending in -ase is most likely a(n)? A) Carbohydrate B) Enzyme C) Lipid D) Nucleotide Copyright © 2015 Wolters Kluwer • All Rights Reserved Organic Compounds (cont.) Pop Quiz Answer 2.15 A substance that has a name ending in -ase is most likely a(n)? A) Carbohydrate B) Enzyme C) Lipid D) Nucleotide Copyright © 2015 Wolters Kluwer • All Rights Reserved Case Study Learning Objective 15. Use the case study to discuss the importance of regulating body fluid quantity and composition. Copyright © 2015 Wolters Kluwer • All Rights Reserved Case Study (cont.) Margaret’s Case: Chemistry’s Role in Health Science • Some terms that illustrate the importance of body fluid quantity and composition: – Dehydration – Hematocrit – Hypernatremia – Hypotension – Tachycardia Copyright © 2015 Wolters Kluwer • All Rights Reserved Word Anatomy Learning Objective 16. Show how word parts are used to build words related to chemistry, matter, and life. Copyright © 2015 Wolters Kluwer • All Rights Reserved Word Anatomy (cont.) Word Part Meaning Example Chemical Bonds co- together Covalent bonds form when atoms share electrons. Solutions and Suspensions aqu/e water In an aqueous solution, water is solvent. heter/o- different Heterogeneous solutions are different (not uniform) throughout. hom/o- same Homogeneous mixtures are the same throughout. hydr/o water Dehydration is a deficiency of water. phil to like Hydrophilic substances “like” water— they mix with or dissolve it. phobia to fear Hydrophobic substances “fear” water— they repel and do not dissolve it. Copyright © 2015 Wolters Kluwer • All Rights Reserved Word Anatomy (cont.) Word Part Meaning Example Organic Compounds -ase suffix used in naming enzymes A lipase is an enzyme that acts on lipids. de- remove Denaturation of a protein removes its ability to function (changes its nature). di- twice, double A disaccharide consists of two simple sugars. glyc/o- glucose, sweet Glycogen is a storage form of glucose. It breaks down to release glucose. mon/o- one In a monosaccharide, “mono-” refers to one. poly- many A polysaccharide consists of many simple sugars. sacchar/o sugar A monosaccharide consists of one simple sugar. tri- three Triglycerides have one fatty acid attached to each of three carbon atoms. Copyright © 2015 Wolters Kluwer • All Rights Reserved